RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 TRAPPC2LH3BP13 241 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 STX16-NPEPL1H3BU86 382 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 UPK1AO00322 258 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 NR5A2O00482 541 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 STX16O14662 325 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 ATP8B1O43520 1251 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 GPR137BO60478 399 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 EIF4E2O60573 245 aaKnown RBP4.34□□□□□ -1.71
CKAP4-203ENST00000553039 DUS4LO95620 317 aaKnown RBP4.34□□□□□ -1.71
CKAP4-203ENST00000553039 PMS2P2O95744 297 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 PLATP00750 562 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 KRT14P02533 472 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 SBK2P0C263 348 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 RBMY1DP0C7P1 496 aaKnown RBP4.34□□□□□ -1.71
CKAP4-203ENST00000553039 IGHV4-38-2P0DP08 117 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 ATP6V1C1P21283 382 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 LMO1P25800 156 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 IVDP26440 423 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 CD80P33681 288 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 ARL3P36405 182 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 PGM1P36871 562 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 PSMB10P40306 273 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 APOBEC1P41238 236 aaKnown RBP4.34□□□□□ -1.71
CKAP4-203ENST00000553039 KCNJ1P48048 391 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 NCBP2P52298 156 aaKnown RBP eCLIP4.34□□□□□ -1.71
CKAP4-203ENST00000553039 OR2B6P58173 313 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 CLRN1P58418 232 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 SLC35A1P78382 337 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 LCP2Q13094 533 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 PDE7AQ13946 482 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 CBFBQ13951 182 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 PPP1R7Q15435 360 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 TBCEQ15813 527 aaPredicted RBP4.34□□□□□ -1.71
CKAP4-203ENST00000553039 ESCO2Q56NI9 601 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 PRAMEF8Q5VWM4 474 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 PRAMEF7Q5VXH5 474 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 LIPMQ5VYY2 423 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 METTL2BQ6P1Q9 378 aaKnown RBP4.34□□□□□ -1.71
CKAP4-203ENST00000553039 EMBQ6PCB8 327 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 ZCCHC12Q6PEW1 402 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 LRIG3Q6UXM1 1119 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 Q6ZSV7 163 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 COMMD6Q7Z4G1 85 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 C1orf174Q8IYL3 243 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 ZBED8Q8IZ13 594 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 CMTM4Q8IZR5 234 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 OR2L13Q8N349 312 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 TMCO5AQ8N6Q1 288 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 CDRT4Q8N9R6 151 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 WFDC9Q8NEX5 89 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 OR5W2Q8NH69 310 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 ABHD5Q8WTS1 349 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 IFT81Q8WYA0 676 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 ST8SIA1Q92185 356 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 TMEM45BQ96B21 275 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 UPRTQ96BW1 309 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 ELP4Q96EB1 424 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 SF3B5Q9BWJ5 86 aaKnown RBP4.34□□□□□ -1.71
CKAP4-203ENST00000553039 NMUR2Q9GZQ4 415 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 EGLN1Q9GZT9 426 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 OR10A2Q9H208 303 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 ELOVL6Q9H5J4 265 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 BRF2Q9HAW0 419 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 NMRAL1Q9HBL8 299 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 NOX3Q9HBY0 568 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 TAAR3PQ9P1P4 343 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 DNAJB11Q9UBS4 358 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 RPUSD1Q9UJJ7 312 aaKnown RBP4.34□□□□□ -1.71
CKAP4-203ENST00000553039 SLC12A4Q9UP95 1085 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 CARD8Q9Y2G2 431 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 RNF11Q9Y3C5 154 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 LYVE1Q9Y5Y7 322 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 PSAT1Q9Y617 370 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 DSPPQ9NZW4 1301 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 PLXNB1O43157 2135 aa4.34□□□□□ -1.71
CKAP4-203ENST00000553039 STAB2Q8WWQ8 2551 aa4.34□□□□□ -1.72
CKAP4-203ENST00000553039 BIRC6Q9NR09 4857 aa4.33□□□□□ -1.72
CKAP4-203ENST00000553039 PCNX3Q9H6A9 2034 aa4.33□□□□□ -1.72
CKAP4-203ENST00000553039 GNG14A0A1W2PPG7 69 aa4.33□□□□□ -1.72
CKAP4-203ENST00000553039 hCG_1807616A0A1W2PRN6 198 aa4.33□□□□□ -1.72
CKAP4-203ENST00000553039 SUPT3HB4E1H0 165 aa4.33□□□□□ -1.72
CKAP4-203ENST00000553039 TRIM49D1C9J1S8 452 aa4.33□□□□□ -1.72
CKAP4-203ENST00000553039 SUPT3HO75486 399 aa4.33□□□□□ -1.72
CKAP4-203ENST00000553039 KCNK2O95069 426 aa4.33□□□□□ -1.72
CKAP4-203ENST00000553039 NKX2-2O95096 273 aa4.33□□□□□ -1.72
CKAP4-203ENST00000553039 LGI1O95970 557 aa4.33□□□□□ -1.72
CKAP4-203ENST00000553039 IGKV1D-16P01601 117 aa4.33□□□□□ -1.72
CKAP4-203ENST00000553039 MELTFP08582 738 aa4.33□□□□□ -1.72
CKAP4-203ENST00000553039 IFI6P09912 130 aa4.33□□□□□ -1.72
CKAP4-203ENST00000553039 CD1DP15813 335 aa4.33□□□□□ -1.72
CKAP4-203ENST00000553039 MAGEA3P43357 314 aa4.33□□□□□ -1.72
CKAP4-203ENST00000553039 MAGEB1P43366 347 aa4.33□□□□□ -1.72
CKAP4-203ENST00000553039 GSTM5P46439 218 aa4.33□□□□□ -1.72
CKAP4-203ENST00000553039 ASMTP46597 345 aa4.33□□□□□ -1.72
CKAP4-203ENST00000553039 CAPZA2P47755 286 aa4.33□□□□□ -1.72
CKAP4-203ENST00000553039 MRPS25P82663 173 aaKnown RBP4.33□□□□□ -1.72
CKAP4-203ENST00000553039 H3F3AP84243 136 aa4.33□□□□□ -1.72
CKAP4-203ENST00000553039 CAV1Q03135 178 aa4.33□□□□□ -1.72
CKAP4-203ENST00000553039 ZNF117Q03924 483 aa4.33□□□□□ -1.72
CKAP4-203ENST00000553039 MERTKQ12866 999 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms