RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 SH3PXD2BA1X283 911 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 MRASO14807 208 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 CLPTM1O96005 669 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 BCHEP06276 602 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 TFPTP0C1Z6 253 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 IFNGR1P15260 489 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 ZNF23P17027 643 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 APEX1P27695 318 aaKnown RBP7.57□□□□□ -1.2
TMEM116-217ENST00000552801 NTF4P34130 210 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 ALDH3B2P48448 385 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 GSK3AP49840 483 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 SELENOPP49908 381 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 PPOXP50336 477 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 CLDN17P56750 224 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 DSTNP60981 165 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 TUBA1BP68363 451 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 TUBA4AP68366 448 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 NAAAQ02083 359 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 BNIP2Q12982 314 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 CR1LQ2VPA4 569 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 KCTD21Q4G0X4 260 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 INTS11Q5TA45 600 aaKnown RBP7.57□□□□□ -1.2
TMEM116-217ENST00000552801 SHQ1Q6PI26 577 aaKnown RBP7.57□□□□□ -1.2
TMEM116-217ENST00000552801 TUBA1AQ71U36 451 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 SATL1Q86VE3 508 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 GLB1L3Q8NCI6 653 aaPredicted RBP7.57□□□□□ -1.2
TMEM116-217ENST00000552801 IL17RDQ8NFM7 739 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 SLCO4A1Q96BD0 722 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 MSI2Q96DH6 328 aaKnown RBP7.57□□□□□ -1.2
TMEM116-217ENST00000552801 TRIM15Q9C019 465 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 BPESC1Q9GZL8 116 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 ADAM19Q9H013 955 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 SLC38A1Q9H2H9 487 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 PLK3Q9H4B4 646 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 RAD21L1Q9H4I0 556 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 B3GAT2Q9NPZ5 323 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 SDR39U1Q9NRG7 319 aaPredicted RBP7.57□□□□□ -1.2
TMEM116-217ENST00000552801 RLIMQ9NVW2 624 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 USP22Q9UPT9 525 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 ZNF443Q9Y2A4 671 aaPredicted RBP7.57□□□□□ -1.2
TMEM116-217ENST00000552801 IFT52Q9Y366 437 aa7.57□□□□□ -1.2
TMEM116-217ENST00000552801 FBN1P35555 2871 aaKnown RBP7.57□□□□□ -1.2
TMEM116-217ENST00000552801 IGHV4-61A0A0C4DH41 118 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 CDHR4A6H8M9 788 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 M0R082 166 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 NR5A2O00482 541 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 IL6P05231 212 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 ALDOCP09972 364 aaKnown RBP7.56□□□□□ -1.2
TMEM116-217ENST00000552801 CECR9P0C854 216 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 ARR3P36575 388 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 STX1BP61266 288 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 UFM1P61960 85 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 GALK2Q01415 458 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 DAG1Q14118 895 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 EFNB3Q15768 340 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 C3orf36Q3SXR2 165 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 PDCD4Q53EL6 469 aaKnown RBP7.56□□□□□ -1.2
TMEM116-217ENST00000552801 AGKQ53H12 422 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 ZNF311Q5JNZ3 666 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 C12orf54Q6X4T0 127 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 ZNF836Q6ZNA1 936 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 CREB3L2Q70SY1 520 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 VRK2Q86Y07 508 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 FUNDC1Q8IVP5 155 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 CCDC36Q8IYA8 594 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 SVOPLQ8N434 492 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 RFLNBQ8N5W9 214 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 C10orf53Q8N6V4 93 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 LINC01356Q8N9X3 169 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 PCYOX1LQ8NBM8 494 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 PIK3C3Q8NEB9 887 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 ZNF417Q8TAU3 575 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 STK35Q8TDR2 534 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 UBASH3BQ8TF42 649 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 ITCHQ96J02 903 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 SNX18Q96RF0 628 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 ZNF587Q96SQ5 575 aaPredicted RBP7.56□□□□□ -1.2
TMEM116-217ENST00000552801 HOPXQ9BPY8 73 aaPredicted RBP7.56□□□□□ -1.2
TMEM116-217ENST00000552801 LINC00470Q9BZP3 86 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 CRLF2Q9HC73 371 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 SLC52A3Q9NQ40 469 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 ETAA1Q9NY74 926 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 TMEFF2Q9UIK5 374 aaPredicted RBP7.56□□□□□ -1.2
TMEM116-217ENST00000552801 NDUFAF1Q9Y375 327 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 CMAHPQ9Y471 501 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 AP4S1Q9Y587 144 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 DNHD1Q96M86 4753 aa7.56□□□□□ -1.2
TMEM116-217ENST00000552801 ARFGEF3Q5TH69 2177 aa7.55□□□□□ -1.2
TMEM116-217ENST00000552801 MALRD1Q5VYJ5 2156 aa7.55□□□□□ -1.2
TMEM116-217ENST00000552801 ARPC4-TTLL3A0A0A6YYG9 625 aa7.55□□□□□ -1.2
TMEM116-217ENST00000552801 A0A0G2JPF8 293 aa7.55□□□□□ -1.2
TMEM116-217ENST00000552801 LRP5LA4QPB2 252 aa7.55□□□□□ -1.2
TMEM116-217ENST00000552801 ZNF726A6NNF4 738 aa7.55□□□□□ -1.2
TMEM116-217ENST00000552801 VWC2LB2RUY7 222 aa7.55□□□□□ -1.2
TMEM116-217ENST00000552801 HNRNPCL2B2RXH8 293 aa7.55□□□□□ -1.2
TMEM116-217ENST00000552801 HNRNPCL3B7ZW38 293 aa7.55□□□□□ -1.2
TMEM116-217ENST00000552801 ZNF701M0R085 212 aaPredicted RBP7.55□□□□□ -1.2
TMEM116-217ENST00000552801 FRS3O43559 492 aa7.55□□□□□ -1.2
TMEM116-217ENST00000552801 OR2T1O43869 369 aa7.55□□□□□ -1.2
TMEM116-217ENST00000552801 UPK3AO75631 287 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms