RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 LSM11P83369 360 aaKnown RBP eCLIP13.38□□□□□ -0.27
BRF1-220ENST00000552127 CYBRD1Q53TN4 286 aa13.38□□□□□ -0.27
BRF1-220ENST00000552127 HIST2H2BDQ6DRA6 164 aa13.38□□□□□ -0.27
BRF1-220ENST00000552127 DEF8Q6ZN54 512 aa13.38□□□□□ -0.27
BRF1-220ENST00000552127 WDFY1Q8IWB7 410 aa13.38□□□□□ -0.27
BRF1-220ENST00000552127 MICU2Q8IYU8 434 aa13.38□□□□□ -0.27
BRF1-220ENST00000552127 ZNF525Q8N782 197 aa13.38□□□□□ -0.27
BRF1-220ENST00000552127 FAM169BQ8N8A8 192 aa13.38□□□□□ -0.27
BRF1-220ENST00000552127 RP9Q8TA86 221 aaKnown RBP13.38□□□□□ -0.27
BRF1-220ENST00000552127 TXNDC15Q96J42 360 aa13.38□□□□□ -0.27
BRF1-220ENST00000552127 NANSQ9NR45 359 aa13.38□□□□□ -0.27
BRF1-220ENST00000552127 ZNF229Q9UJW7 825 aa13.38□□□□□ -0.27
BRF1-220ENST00000552127 ZNF503-AS2A6NEH8 195 aa13.37□□□□□ -0.27
BRF1-220ENST00000552127 ZNF726A6NNF4 738 aa13.37□□□□□ -0.27
BRF1-220ENST00000552127 H7C417 338 aa13.37□□□□□ -0.27
BRF1-220ENST00000552127 ATP8B1O43520 1251 aa13.37□□□□□ -0.27
BRF1-220ENST00000552127 CCDC22O60826 627 aa13.37□□□□□ -0.27
BRF1-220ENST00000552127 OR5F1O95221 314 aa13.37□□□□□ -0.27
BRF1-220ENST00000552127 IGKV3-15P01624 115 aa13.37□□□□□ -0.27
BRF1-220ENST00000552127 CRYAAP02489 173 aa13.37□□□□□ -0.27
BRF1-220ENST00000552127 COX4I1P13073 169 aa13.37□□□□□ -0.27
BRF1-220ENST00000552127 IFNGR1P15260 489 aa13.37□□□□□ -0.27
BRF1-220ENST00000552127 USF1P22415 310 aaPredicted RBP13.37□□□□□ -0.27
BRF1-220ENST00000552127 APOBEC3AP31941 199 aaPredicted RBP13.37□□□□□ -0.27
BRF1-220ENST00000552127 COMPP49747 757 aaPredicted RBP13.37□□□□□ -0.27
BRF1-220ENST00000552127 BIDP55957 195 aa13.37□□□□□ -0.27
BRF1-220ENST00000552127 NAAAQ02083 359 aa13.37□□□□□ -0.27
BRF1-220ENST00000552127 ZP4Q12836 540 aa13.37□□□□□ -0.27
BRF1-220ENST00000552127 CAMK2DQ13557 499 aa13.37□□□□□ -0.27
BRF1-220ENST00000552127 SLC46A3Q7Z3Q1 461 aa13.37□□□□□ -0.27
BRF1-220ENST00000552127 NANOGNBQ7Z5D8 188 aa13.37□□□□□ -0.27
BRF1-220ENST00000552127 OR6N1Q8NGY5 312 aa13.37□□□□□ -0.27
BRF1-220ENST00000552127 HTRA1Q92743 480 aa13.37□□□□□ -0.27
BRF1-220ENST00000552127 MSI2Q96DH6 328 aaKnown RBP13.37□□□□□ -0.27
BRF1-220ENST00000552127 ULBP2Q9BZM5 246 aa13.37□□□□□ -0.27
BRF1-220ENST00000552127 SEC61A2Q9H9S3 476 aa13.37□□□□□ -0.27
BRF1-220ENST00000552127 CMTM6Q9NX76 183 aa13.37□□□□□ -0.27
BRF1-220ENST00000552127 AP3M1Q9Y2T2 418 aa13.37□□□□□ -0.27
BRF1-220ENST00000552127 ZNF281Q9Y2X9 895 aa13.37□□□□□ -0.27
BRF1-220ENST00000552127 ELOVL7A1L3X0 281 aa13.36□□□□□ -0.27
BRF1-220ENST00000552127 RNF13O43567 381 aa13.36□□□□□ -0.27
BRF1-220ENST00000552127 SHOX2O60902 331 aaPredicted RBP13.36□□□□□ -0.27
BRF1-220ENST00000552127 CELA3BP08861 270 aa13.36□□□□□ -0.27
BRF1-220ENST00000552127 ASAH2BP0C7U1 165 aa13.36□□□□□ -0.27
BRF1-220ENST00000552127 UMPSP11172 480 aa13.36□□□□□ -0.27
BRF1-220ENST00000552127 CBR1P16152 277 aa13.36□□□□□ -0.27
BRF1-220ENST00000552127 KDELR2P33947 212 aa13.36□□□□□ -0.27
BRF1-220ENST00000552127 RBM34P42696 430 aaKnown RBP13.36□□□□□ -0.27
BRF1-220ENST00000552127 CAPZA2P47755 286 aa13.36□□□□□ -0.27
BRF1-220ENST00000552127 OR1E2P47887 323 aa13.36□□□□□ -0.27
BRF1-220ENST00000552127 CSNK1A1P48729 337 aa13.36□□□□□ -0.27
BRF1-220ENST00000552127 IDH3GP51553 393 aaPredicted RBP13.36□□□□□ -0.27
BRF1-220ENST00000552127 UGT2B15P54855 530 aa13.36□□□□□ -0.27
BRF1-220ENST00000552127 CHRNB3Q05901 458 aa13.36□□□□□ -0.27
BRF1-220ENST00000552127 SLC35D2Q76EJ3 337 aa13.36□□□□□ -0.27
BRF1-220ENST00000552127 ZNF627Q7L945 461 aa13.36□□□□□ -0.27
BRF1-220ENST00000552127 MYPOPQ86VE0 399 aaPredicted RBP13.36□□□□□ -0.27
BRF1-220ENST00000552127 NKAIN4Q8IVV8 208 aa13.36□□□□□ -0.27
BRF1-220ENST00000552127 CCDC36Q8IYA8 594 aa13.36□□□□□ -0.27
BRF1-220ENST00000552127 LRRC17Q8N6Y2 441 aa13.36□□□□□ -0.27
BRF1-220ENST00000552127 FAM168AQ92567 244 aa13.36□□□□□ -0.27
BRF1-220ENST00000552127 MEPEQ9NQ76 525 aaPredicted RBP13.36□□□□□ -0.27
BRF1-220ENST00000552127 TAS2R5Q9NYW4 299 aa13.36□□□□□ -0.27
BRF1-220ENST00000552127 RIMS3Q9UJD0 308 aa13.36□□□□□ -0.27
BRF1-220ENST00000552127 POFUT2Q9Y2G5 429 aa13.36□□□□□ -0.27
BRF1-220ENST00000552127 MT-ND1P03886 318 aa13.35□□□□□ -0.27
BRF1-220ENST00000552127 HIST1H2ABP04908 130 aa13.35□□□□□ -0.27
BRF1-220ENST00000552127 THRBP10828 461 aa13.35□□□□□ -0.27
BRF1-220ENST00000552127 BMP4P12644 408 aa13.35□□□□□ -0.27
BRF1-220ENST00000552127 B4GALT1P15291 398 aa13.35□□□□□ -0.27
BRF1-220ENST00000552127 CALCRP30988 508 aa13.35□□□□□ -0.27
BRF1-220ENST00000552127 ARR3P36575 388 aa13.35□□□□□ -0.27
BRF1-220ENST00000552127 PIN1Q13526 163 aaPredicted RBP13.35□□□□□ -0.27
BRF1-220ENST00000552127 PRR31Q5SQ13 230 aa13.35□□□□□ -0.27
BRF1-220ENST00000552127 ZNF813Q6ZN06 617 aa13.35□□□□□ -0.27
BRF1-220ENST00000552127 HIST3H2AQ7L7L0 130 aa13.35□□□□□ -0.27
BRF1-220ENST00000552127 SPATA21Q7Z572 469 aa13.35□□□□□ -0.27
BRF1-220ENST00000552127 MDP1Q86V88 176 aa13.35□□□□□ -0.27
BRF1-220ENST00000552127 TREML1Q86YW5 311 aa13.35□□□□□ -0.27
BRF1-220ENST00000552127 SLC15A3Q8IY34 581 aa13.35□□□□□ -0.27
BRF1-220ENST00000552127 OR6X1Q8NH79 312 aa13.35□□□□□ -0.27
BRF1-220ENST00000552127 PFN4Q8NHR9 129 aa13.35□□□□□ -0.27
BRF1-220ENST00000552127 C10orf105Q8TEF2 133 aa13.35□□□□□ -0.27
BRF1-220ENST00000552127 TMEM255BQ8WV15 326 aa13.35□□□□□ -0.27
BRF1-220ENST00000552127 HIST1H2ACQ93077 130 aa13.35□□□□□ -0.27
BRF1-220ENST00000552127 TMEM54Q969K7 222 aa13.35□□□□□ -0.27
BRF1-220ENST00000552127 TPD52L3Q96J77 140 aa13.35□□□□□ -0.27
BRF1-220ENST00000552127 CA10Q9NS85 328 aa13.35□□□□□ -0.27
BRF1-220ENST00000552127 GMPR2Q9P2T1 348 aaKnown RBP13.35□□□□□ -0.27
BRF1-220ENST00000552127 NBEAL2Q6ZNJ1 2754 aa13.34□□□□□ -0.27
BRF1-220ENST00000552127 NME4O00746 187 aa13.34□□□□□ -0.27
BRF1-220ENST00000552127 PDE5AO76074 875 aa13.34□□□□□ -0.27
BRF1-220ENST00000552127 OR7A10O76100 309 aa13.34□□□□□ -0.27
BRF1-220ENST00000552127 IGF2P01344 180 aa13.34□□□□□ -0.27
BRF1-220ENST00000552127 SLC7A2P52569 658 aa13.34□□□□□ -0.27
BRF1-220ENST00000552127 SNRPD2P62316 118 aaKnown RBP13.34□□□□□ -0.27
BRF1-220ENST00000552127 ACTG1P63261 375 aa13.34□□□□□ -0.27
BRF1-220ENST00000552127 SELENOWP63302 87 aa13.34□□□□□ -0.27
BRF1-220ENST00000552127 LIPEQ05469 1076 aa13.34□□□□□ -0.27
BRF1-220ENST00000552127 NPRL3Q12980 569 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms