RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 BGLAPP02818 100 aa10.51□□□□□ -0.73
DDX54-206ENST00000549271 THY1P04216 161 aa10.51□□□□□ -0.73
DDX54-206ENST00000549271 OR4A8P0C604 315 aa10.51□□□□□ -0.73
DDX54-206ENST00000549271 CECR9P0C854 216 aa10.51□□□□□ -0.73
DDX54-206ENST00000549271 DAOP14920 347 aa10.51□□□□□ -0.73
DDX54-206ENST00000549271 EPHA1P21709 976 aa10.51□□□□□ -0.73
DDX54-206ENST00000549271 GRPRP30550 384 aa10.51□□□□□ -0.73
DDX54-206ENST00000549271 IDH3GP51553 393 aaPredicted RBP10.51□□□□□ -0.73
DDX54-206ENST00000549271 FOXL1Q12952 345 aa10.51□□□□□ -0.73
DDX54-206ENST00000549271 RIN1Q13671 783 aa10.51□□□□□ -0.73
DDX54-206ENST00000549271 OCLNQ16625 522 aa10.51□□□□□ -0.73
DDX54-206ENST00000549271 MS4A18Q3C1V0 323 aa10.51□□□□□ -0.73
DDX54-206ENST00000549271 MMEL1Q495T6 779 aa10.51□□□□□ -0.73
DDX54-206ENST00000549271 NIPAL3Q6P499 406 aa10.51□□□□□ -0.73
DDX54-206ENST00000549271 RANBP3LQ86VV4 465 aaPredicted RBP10.51□□□□□ -0.73
DDX54-206ENST00000549271 OR6S1Q8NH40 331 aa10.51□□□□□ -0.73
DDX54-206ENST00000549271 ZNF417Q8TAU3 575 aa10.51□□□□□ -0.73
DDX54-206ENST00000549271 TMEM186Q96B77 213 aa10.51□□□□□ -0.73
DDX54-206ENST00000549271 SLC41A3Q96GZ6 507 aa10.51□□□□□ -0.73
DDX54-206ENST00000549271 OXGR1Q96P68 337 aa10.51□□□□□ -0.73
DDX54-206ENST00000549271 ALKBH3Q96Q83 286 aaPredicted RBP10.51□□□□□ -0.73
DDX54-206ENST00000549271 ZNF587Q96SQ5 575 aaPredicted RBP10.51□□□□□ -0.73
DDX54-206ENST00000549271 SH3GL1Q99961 368 aa10.51□□□□□ -0.73
DDX54-206ENST00000549271 ECSITQ9BQ95 431 aa10.51□□□□□ -0.73
DDX54-206ENST00000549271 ESM1Q9NQ30 184 aa10.51□□□□□ -0.73
DDX54-206ENST00000549271 SLC13A4Q9UKG4 626 aa10.51□□□□□ -0.73
DDX54-206ENST00000549271 LOC102725191A0A1B0GVB3 256 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 VSTM5A8MXK1 200 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 AIM2O14862 343 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 SLC22A2O15244 555 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 HPRP00739 348 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 HKR1P10072 659 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 CBR1P16152 277 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 CBLP22681 906 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 CALCRP30988 508 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 NCALDP61601 193 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 ROR2Q01974 943 aaKnown RBP10.5□□□□□ -0.73
DDX54-206ENST00000549271 POU3F1Q03052 451 aaPredicted RBP10.5□□□□□ -0.73
DDX54-206ENST00000549271 HGFACQ04756 655 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 CCNIQ14094 377 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 MAPRE2Q15555 327 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 ENTPD8Q5MY95 495 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 SWT1Q5T5J6 900 aaKnown RBP10.5□□□□□ -0.73
DDX54-206ENST00000549271 INTS11Q5TA45 600 aaKnown RBP10.5□□□□□ -0.73
DDX54-206ENST00000549271 ZNF613Q6PF04 617 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 SHQ1Q6PI26 577 aaKnown RBP10.5□□□□□ -0.73
DDX54-206ENST00000549271 THSD4Q6ZMP0 1018 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 WDR88Q6ZMY6 472 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 H1FNTQ75WM6 255 aaPredicted RBP10.5□□□□□ -0.73
DDX54-206ENST00000549271 CCDC36Q8IYA8 594 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 ZNF786Q8N393 782 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 POU5F2Q8N7G0 328 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 ZDHHC22Q8N966 263 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 IL17RDQ8NFM7 739 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 RNF217Q8TC41 542 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 NEU4Q8WWR8 484 aaPredicted RBP10.5□□□□□ -0.73
DDX54-206ENST00000549271 MOGAT1Q96PD6 335 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 DOK1Q99704 481 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 TMEM43Q9BTV4 400 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 RAB1BQ9H0U4 201 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 HIF1ANQ9NWT6 349 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 SELENONQ9NZV5 590 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 CAPN7Q9Y6W3 813 aa10.5□□□□□ -0.73
DDX54-206ENST00000549271 CPSF4LA6NMK7 179 aaKnown RBP10.49□□□□□ -0.73
DDX54-206ENST00000549271 LRRN3E7EW58 273 aa10.49□□□□□ -0.73
DDX54-206ENST00000549271 TRAF3IP2O43734 574 aaPredicted RBP10.49□□□□□ -0.73
DDX54-206ENST00000549271 ZNF43P17038 809 aa10.49□□□□□ -0.73
DDX54-206ENST00000549271 ARR3P36575 388 aa10.49□□□□□ -0.73
DDX54-206ENST00000549271 CLDN17P56750 224 aa10.49□□□□□ -0.73
DDX54-206ENST00000549271 C1orf229Q6ZS94 237 aaPredicted RBP10.49□□□□□ -0.73
DDX54-206ENST00000549271 PCYOX1LQ8NBM8 494 aa10.49□□□□□ -0.73
DDX54-206ENST00000549271 ADPRHL1Q8NDY3 354 aa10.49□□□□□ -0.73
DDX54-206ENST00000549271 RP9Q8TA86 221 aaKnown RBP10.49□□□□□ -0.73
DDX54-206ENST00000549271 VANGL1Q8TAA9 524 aaPredicted RBP10.49□□□□□ -0.73
DDX54-206ENST00000549271 RCN3Q96D15 328 aa10.49□□□□□ -0.73
DDX54-206ENST00000549271 SUCNR1Q9BXA5 334 aa10.49□□□□□ -0.73
DDX54-206ENST00000549271 PCDHAC1Q9H158 963 aa10.49□□□□□ -0.73
DDX54-206ENST00000549271 GID8Q9NWU2 228 aa10.49□□□□□ -0.73
DDX54-206ENST00000549271 CMTM6Q9NX76 183 aa10.49□□□□□ -0.73
DDX54-206ENST00000549271 GMPR2Q9P2T1 348 aaKnown RBP10.49□□□□□ -0.73
DDX54-206ENST00000549271 GRIP1Q9Y3R0 1128 aa10.49□□□□□ -0.73
DDX54-206ENST00000549271 WNK1Q9H4A3 2382 aa10.48□□□□□ -0.73
DDX54-206ENST00000549271 A0A096LPE4 126 aa10.48□□□□□ -0.73
DDX54-206ENST00000549271 A0A1W2PPZ6 126 aa10.48□□□□□ -0.73
DDX54-206ENST00000549271 TMEM129A0AVI4 362 aa10.48□□□□□ -0.73
DDX54-206ENST00000549271 CHP2O43745 196 aa10.48□□□□□ -0.73
DDX54-206ENST00000549271 SLC43A1O75387 559 aa10.48□□□□□ -0.73
DDX54-206ENST00000549271 ERCC1P07992 297 aaPredicted RBP10.48□□□□□ -0.73
DDX54-206ENST00000549271 MSMBP08118 114 aa10.48□□□□□ -0.73
DDX54-206ENST00000549271 COX4I1P13073 169 aa10.48□□□□□ -0.73
DDX54-206ENST00000549271 HLA-DOBP13765 273 aa10.48□□□□□ -0.73
DDX54-206ENST00000549271 NPR2P20594 1047 aa10.48□□□□□ -0.73
DDX54-206ENST00000549271 GTF2E2P29084 291 aaKnown RBP10.48□□□□□ -0.73
DDX54-206ENST00000549271 THBS4P35443 961 aa10.48□□□□□ -0.73
DDX54-206ENST00000549271 SEC24CP53992 1094 aa10.48□□□□□ -0.73
DDX54-206ENST00000549271 UBA52P62987 128 aaKnown RBP10.48□□□□□ -0.73
DDX54-206ENST00000549271 TUBA1BP68363 451 aa10.48□□□□□ -0.73
DDX54-206ENST00000549271 TUBA4AP68366 448 aa10.48□□□□□ -0.73
DDX54-206ENST00000549271 ARF1P84077 181 aaKnown RBP10.48□□□□□ -0.73
DDX54-206ENST00000549271 MFSD13AQ14CX5 517 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms