RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 TROVE2P10155 538 aaKnown RBP eCLIP3.31□□□□□ -1.88
APAF1-208ENST00000549007 TNNI3P19429 210 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 CD82P27701 267 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 XKP51811 444 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 ERVK-8P63133 956 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 Q0VFX4 171 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 PPP1R8Q12972 351 aaKnown RBP3.31□□□□□ -1.88
APAF1-208ENST00000549007 EXOSC7Q15024 291 aaKnown RBP3.31□□□□□ -1.88
APAF1-208ENST00000549007 NNATQ16517 81 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 FAM174BQ3ZCQ3 159 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 SPANXN4Q5MJ08 99 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 IRAK1BP1Q5VVH5 260 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 OR4F3Q6IEY1 312 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 FAM71E1Q6IPT2 247 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 ZNF704Q6ZNC4 412 aaPredicted RBP3.31□□□□□ -1.88
APAF1-208ENST00000549007 C17orf107Q6ZR85 190 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 CLECL1Q8IZS7 167 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 ZNF114Q8NC26 417 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 OR11G2Q8NGC1 345 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 OR9A2Q8NGT5 310 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 C16orf52Q8NHV5 167 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 GRHL3Q8TE85 626 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 ALKBH7Q9BT30 221 aaPredicted RBP3.31□□□□□ -1.88
APAF1-208ENST00000549007 OR8D2Q9GZM6 311 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 ROGDIQ9GZN7 287 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 LYRM4Q9HD34 91 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 MIEF1Q9NQG6 463 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 FAM118AQ9NWS6 357 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 LYARQ9NX58 379 aaKnown RBP3.31□□□□□ -1.88
APAF1-208ENST00000549007 ELOVL5Q9NYP7 299 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 ZNF224Q9NZL3 707 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 PHF11Q9UIL8 331 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 FAF1Q9UNN5 650 aaPredicted RBP3.31□□□□□ -1.88
APAF1-208ENST00000549007 EIF3LQ9Y262 564 aaKnown RBP3.31□□□□□ -1.88
APAF1-208ENST00000549007 TLN1Q9Y490 2541 aaKnown RBP3.31□□□□□ -1.88
APAF1-208ENST00000549007 IGLV3-12A0A075B6K2 115 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 TRAV18A0A075B6X5 111 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 GMNCA6NCL1 334 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 GABRR3A8MPY1 467 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 A8MUI8 341 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 C21orf140B9A014 251 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 NR5A2O00482 541 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 NT5EP21589 574 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 SKP1P63208 163 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 EMX2Q04743 252 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 CDC20Q12834 499 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 CMPK2Q5EBM0 449 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 OR52E8Q6IFG1 317 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 SLC48A1Q6P1K1 146 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 TMEM64Q6YI46 380 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 GALNT10Q86SR1 603 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 SIAH3Q8IW03 269 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 KDM8Q8N371 416 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 OR5AK3PQ8NH89 298 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 C10orf82Q8WW14 230 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 METTL21AQ8WXB1 218 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 PPCDCQ96CD2 204 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 CCT7Q99832 543 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 DPY30Q9C005 99 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 WDR41Q9HAD4 459 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 YAE1D1Q9NRH1 226 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 GSN-AS1Q9NRJ2 163 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 C14orf105Q9NVL8 296 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 AIG1Q9NVV5 245 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 CES1P1Q9UKY3 287 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 MRPS33Q9Y291 106 aaKnown RBP3.31□□□□□ -1.88
APAF1-208ENST00000549007 SPACA6W5XKT8 324 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 BOD1L1Q8NFC6 3051 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 NUP214P35658 2090 aaPredicted RBP3.31□□□□□ -1.88
APAF1-208ENST00000549007 IGKV3D-11A0A0A0MRZ8 115 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 SCAMP2O15127 329 aaKnown RBP3.31□□□□□ -1.88
APAF1-208ENST00000549007 SCGB2A1O75556 95 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 CPSF4O95639 269 aaKnown RBP3.31□□□□□ -1.88
APAF1-208ENST00000549007 GPR75O95800 540 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 C6orf47O95873 294 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 COX6A1P12074 109 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 CPMP14384 443 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 MMP11P24347 488 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 CDK9P50750 372 aaKnown RBP3.31□□□□□ -1.88
APAF1-208ENST00000549007 CCL11P51671 97 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 NCBP2P52298 156 aaKnown RBP eCLIP3.31□□□□□ -1.88
APAF1-208ENST00000549007 ROR2Q01974 943 aaKnown RBP3.31□□□□□ -1.88
APAF1-208ENST00000549007 CARTPTQ16568 116 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 KRTAP15-1Q3LI76 137 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 GTDC1Q4AE62 458 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 AGKQ53H12 422 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 TRMT12Q53H54 448 aaKnown RBP3.31□□□□□ -1.88
APAF1-208ENST00000549007 TMEM107Q6UX40 140 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 CPEB2Q7Z5Q1 589 aaKnown RBP3.31□□□□□ -1.88
APAF1-208ENST00000549007 KRTAP19-1Q8IUB9 90 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 OR4K14Q8NGD5 310 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 OR1J1Q8NGS3 322 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 CCDC107Q8WV48 283 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 FCRL1Q96LA6 429 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 NSMCE2Q96MF7 247 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 FAIM2Q9BWQ8 316 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 NMUR2Q9GZQ4 415 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 SLC26A1Q9H2B4 701 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 DCLRE1BQ9H816 532 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 IL1RL2Q9HB29 575 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms