RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 UBA52P62987 128 aaKnown RBP12.48□□□□□ -0.41
HDAC7-228ENST00000548938 FLI1Q01543 452 aaPredicted RBP12.48□□□□□ -0.41
HDAC7-228ENST00000548938 TANGO2Q6ICL3 276 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 ANKRD16Q6P6B7 361 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 ZNF546Q86UE3 836 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 BOLLQ8N9W6 283 aaKnown RBP12.48□□□□□ -0.41
HDAC7-228ENST00000548938 OR52R1Q8NGF1 315 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 TMEM106AQ96A25 262 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 TM4SF19Q96DZ7 209 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 NKX6-2Q9C056 277 aaPredicted RBP12.48□□□□□ -0.41
HDAC7-228ENST00000548938 TAS2R8Q9NYW2 309 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 TBC1D29Q9UFV1 150 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 SLC17A4Q9Y2C5 497 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 TRBV23OR9-2A0A075B6M9 112 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 MPTX1A8MV57 137 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 ABCD4O14678 606 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 ARPC3O15145 178 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 ZNF254O75437 659 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 NKX2-2O95096 273 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 ABHD16AO95870 558 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 FBXO45P0C2W1 286 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 MGMTP16455 207 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 CSF2RBP32927 897 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 RPS27P42677 84 aaKnown RBP12.48□□□□□ -0.41
HDAC7-228ENST00000548938 ZCCHC12Q6PEW1 402 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 ZNF75AQ96N20 296 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 LMAN2LQ9H0V9 348 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 PRDM9Q9NQV7 894 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 GDE1Q9NZC3 331 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 IKZF2Q9UKS7 526 aa12.48□□□□□ -0.41
HDAC7-228ENST00000548938 LINC01565O15544 149 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 GPR75O95800 540 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 LUMP51884 338 aaPredicted RBP12.47□□□□□ -0.41
HDAC7-228ENST00000548938 PABPC1L2AQ5JQF8 200 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 TMED4Q7Z7H5 227 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 ADAD1Q96M93 576 aaKnown RBP12.47□□□□□ -0.41
HDAC7-228ENST00000548938 FGF22Q9HCT0 170 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 A0A1B0GW55 424 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 TVP23AA6NH52 213 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 TACSTD2P09758 323 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 DUX4L2P0CJ85 424 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 DUX4L3P0CJ86 424 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 DUX4L4P0CJ87 422 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 DUX4L5P0CJ88 424 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 DUX4L6P0CJ89 424 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 DUX4L7P0CJ90 424 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 POU3F4P49335 361 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 PSG6Q00889 435 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 CST6Q15828 149 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 CLVS2Q5SYC1 327 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 STEAP1BQ6NZ63 245 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 VITQ6UXI7 678 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 SLC16A9Q7RTY1 509 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 ZNF676Q8N7Q3 588 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 CLEC1AQ8NC01 280 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 TMEM185BQ9H7F4 350 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 POLE3Q9NRF9 147 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 DZANK1Q9NVP4 752 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 DUX4Q9UBX2 424 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 PURGQ9UJV8 347 aaKnown RBP12.47□□□□□ -0.41
HDAC7-228ENST00000548938 PILRAQ9UKJ1 303 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 COLEC10Q9Y6Z7 277 aa12.47□□□□□ -0.41
HDAC7-228ENST00000548938 TRBV5-7A0A0A0MS05 114 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 OR4C45A6NMZ5 311 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 DCTN6O00399 190 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 RASGRP1O95267 797 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 OR4E1P0C645 316 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 IGFALSP35858 605 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 STARP49675 285 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 GPR143P51810 404 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 MOB3CQ70IA8 216 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 BEST3Q8N1M1 668 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 C12orf45Q8N5I9 185 aaPredicted RBP12.46□□□□□ -0.41
HDAC7-228ENST00000548938 FLVCR1-AS1Q8TAF5 88 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 DNTTIP1Q9H147 329 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 SRMSQ9H3Y6 488 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 KLF2Q9Y5W3 355 aaPredicted RBP12.46□□□□□ -0.41
HDAC7-228ENST00000548938 BLOC1S5-TXNDC5H3BN57 136 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 H7C1C5 153 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 CYR61O00622 381 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 ITGB2P05107 769 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 ITGA5P08648 1049 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 CNR1P21554 472 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 AQP2P41181 271 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 LCN6P62502 163 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 RPS4XP62701 263 aaKnown RBP12.46□□□□□ -0.41
HDAC7-228ENST00000548938 FGL1Q08830 312 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 NNATQ16517 81 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 BEX5Q5H9J7 111 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 JMJD6Q6NYC1 403 aaPredicted RBP12.46□□□□□ -0.41
HDAC7-228ENST00000548938 ABHD13Q7L211 337 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 JAZF1Q86VZ6 243 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 TMEM17Q86X19 198 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 STEAP2Q8NFT2 490 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 OR2G2Q8NGZ5 317 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 PMM1Q92871 262 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 CTHRC1Q96CG8 243 aa12.46□□□□□ -0.41
HDAC7-228ENST00000548938 CDCA3Q99618 268 aaPredicted RBP12.46□□□□□ -0.41
HDAC7-228ENST00000548938 RSPH9Q9H1X1 276 aaPredicted RBP12.46□□□□□ -0.41
HDAC7-228ENST00000548938 FBXO4Q9UKT5 387 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms