RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 PPP1R3DO95685 299 aa17.85■□□□□ 0.45
CTDSP2-204ENST00000548823 ASAH2BP0C7U1 165 aa17.85■□□□□ 0.45
CTDSP2-204ENST00000548823 PAICSP22234 425 aaKnown RBP17.85■□□□□ 0.45
CTDSP2-204ENST00000548823 CXCR1P25024 350 aa17.85■□□□□ 0.45
CTDSP2-204ENST00000548823 POLR2HP52434 150 aaKnown RBP17.85■□□□□ 0.45
CTDSP2-204ENST00000548823 TUBA1BP68363 451 aa17.85■□□□□ 0.45
CTDSP2-204ENST00000548823 NTRK2Q16620 822 aa17.85■□□□□ 0.45
CTDSP2-204ENST00000548823 PLBD1Q6P4A8 553 aa17.85■□□□□ 0.45
CTDSP2-204ENST00000548823 TMEM81Q6P7N7 255 aa17.85■□□□□ 0.45
CTDSP2-204ENST00000548823 GDPGP1Q6ZNW5 385 aa17.85■□□□□ 0.45
CTDSP2-204ENST00000548823 TUBA1AQ71U36 451 aa17.85■□□□□ 0.45
CTDSP2-204ENST00000548823 GRINAQ7Z429 371 aa17.85■□□□□ 0.45
CTDSP2-204ENST00000548823 OR6S1Q8NH40 331 aa17.85■□□□□ 0.45
CTDSP2-204ENST00000548823 STK35Q8TDR2 534 aa17.85■□□□□ 0.45
CTDSP2-204ENST00000548823 PTP4A1Q93096 173 aa17.85■□□□□ 0.45
CTDSP2-204ENST00000548823 FKRPQ9H9S5 495 aa17.85■□□□□ 0.45
CTDSP2-204ENST00000548823 SDHAF3Q9NRP4 125 aa17.85■□□□□ 0.45
CTDSP2-204ENST00000548823 TAS2R10Q9NYW0 307 aa17.85■□□□□ 0.45
CTDSP2-204ENST00000548823 ZNF229Q9UJW7 825 aa17.85■□□□□ 0.45
CTDSP2-204ENST00000548823 NBEAL1Q6ZS30 2694 aa17.84■□□□□ 0.45
CTDSP2-204ENST00000548823 J3QRE1 110 aa17.84■□□□□ 0.45
CTDSP2-204ENST00000548823 WWP2O00308 870 aa17.84■□□□□ 0.45
CTDSP2-204ENST00000548823 ETV2O00321 342 aaPredicted RBP17.84■□□□□ 0.45
CTDSP2-204ENST00000548823 GNB5O14775 395 aa17.84■□□□□ 0.45
CTDSP2-204ENST00000548823 SCO2O43819 266 aa17.84■□□□□ 0.45
CTDSP2-204ENST00000548823 SLC2A5P22732 501 aa17.84■□□□□ 0.45
CTDSP2-204ENST00000548823 GADD45AP24522 165 aa17.84■□□□□ 0.45
CTDSP2-204ENST00000548823 ETV1P50549 477 aa17.84■□□□□ 0.45
CTDSP2-204ENST00000548823 WNT4P56705 351 aa17.84■□□□□ 0.45
CTDSP2-204ENST00000548823 FBXW4P57775 412 aa17.84■□□□□ 0.45
CTDSP2-204ENST00000548823 ACSM1Q08AH1 577 aa17.84■□□□□ 0.45
CTDSP2-204ENST00000548823 QPRTQ15274 297 aa17.84■□□□□ 0.45
CTDSP2-204ENST00000548823 LIX1LQ8IVB5 337 aa17.84■□□□□ 0.45
CTDSP2-204ENST00000548823 ARMC10Q8N2F6 343 aa17.84■□□□□ 0.45
CTDSP2-204ENST00000548823 ZFP62Q8NB50 900 aaPredicted RBP17.84■□□□□ 0.45
CTDSP2-204ENST00000548823 SLC37A3Q8NCC5 494 aa17.84■□□□□ 0.45
CTDSP2-204ENST00000548823 DUSP19Q8WTR2 217 aa17.84■□□□□ 0.45
CTDSP2-204ENST00000548823 FAM222BQ8WU58 562 aa17.84■□□□□ 0.45
CTDSP2-204ENST00000548823 ZNF524Q96C55 264 aa17.84■□□□□ 0.45
CTDSP2-204ENST00000548823 ERMAPQ96PL5 475 aaPredicted RBP17.84■□□□□ 0.45
CTDSP2-204ENST00000548823 NANSQ9NR45 359 aa17.84■□□□□ 0.45
CTDSP2-204ENST00000548823 INPP5EQ9NRR6 644 aa17.84■□□□□ 0.45
CTDSP2-204ENST00000548823 HIVEP2P31629 2446 aa17.84■□□□□ 0.45
CTDSP2-204ENST00000548823 TRAV36DV7A0A075B6V5 113 aa17.83■□□□□ 0.45
CTDSP2-204ENST00000548823 A0A0G2JNJ9 132 aa17.83■□□□□ 0.45
CTDSP2-204ENST00000548823 MT-ATP6P00846 226 aa17.83■□□□□ 0.45
CTDSP2-204ENST00000548823 LIMS3P0CW19 117 aa17.83■□□□□ 0.45
CTDSP2-204ENST00000548823 LIMS4P0CW20 117 aa17.83■□□□□ 0.45
CTDSP2-204ENST00000548823 GLI4P10075 376 aa17.83■□□□□ 0.45
CTDSP2-204ENST00000548823 NOS3P29474 1203 aa17.83■□□□□ 0.45
CTDSP2-204ENST00000548823 UQCRC1P31930 480 aa17.83■□□□□ 0.45
CTDSP2-204ENST00000548823 CLK1P49759 484 aaKnown RBP17.83■□□□□ 0.45
CTDSP2-204ENST00000548823 NKX6-1P78426 367 aaPredicted RBP17.83■□□□□ 0.45
CTDSP2-204ENST00000548823 POU4F2Q12837 409 aa17.83■□□□□ 0.45
CTDSP2-204ENST00000548823 TSTQ16762 297 aaKnown RBP17.83■□□□□ 0.45
CTDSP2-204ENST00000548823 SLC35F1Q5T1Q4 408 aa17.83■□□□□ 0.45
CTDSP2-204ENST00000548823 C16orf47Q6ZP98 133 aaPredicted RBP17.83■□□□□ 0.45
CTDSP2-204ENST00000548823 DND1Q8IYX4 353 aaKnown RBP17.83■□□□□ 0.45
CTDSP2-204ENST00000548823 LRRC17Q8N6Y2 441 aa17.83■□□□□ 0.45
CTDSP2-204ENST00000548823 LRRC75AQ8NAA5 344 aa17.83■□□□□ 0.45
CTDSP2-204ENST00000548823 ZNF485Q8NCK3 441 aa17.83■□□□□ 0.45
CTDSP2-204ENST00000548823 BBS1Q8NFJ9 593 aa17.83■□□□□ 0.45
CTDSP2-204ENST00000548823 OR52N1Q8NH53 320 aa17.83■□□□□ 0.45
CTDSP2-204ENST00000548823 DYNC2LI1Q8TCX1 351 aa17.83■□□□□ 0.45
CTDSP2-204ENST00000548823 COX4I2Q96KJ9 171 aa17.83■□□□□ 0.45
CTDSP2-204ENST00000548823 DACH2Q96NX9 599 aa17.83■□□□□ 0.45
CTDSP2-204ENST00000548823 KLHDC3Q9BQ90 382 aa17.83■□□□□ 0.45
CTDSP2-204ENST00000548823 Q9UFV3 132 aa17.83■□□□□ 0.45
CTDSP2-204ENST00000548823 TMED7-TICAM2A0A0A6YYA0 188 aa17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 CCDC182A6NF36 153 aa17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 MCIDASD6RGH6 385 aa17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 NPIPA2E9PIF3 369 aa17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 NPIPA3F8WFD2 350 aa17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 NPIPB7O75200 414 aa17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 CLPXO76031 633 aa17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 NUDT14O95848 222 aa17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 TXNDC12O95881 172 aa17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 BGLAPP02818 100 aa17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 HSMCR30P0CW71 290 aa17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 NR4A1P22736 598 aa17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 MAP2K6P52564 334 aa17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 MLF1P58340 268 aa17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 CRMP1Q14194 572 aa17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 DAZAP2Q15038 168 aaPredicted RBP17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 TOMM34Q15785 309 aaPredicted RBP17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 SSX1Q16384 188 aa17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 DGUOKQ16854 277 aa17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 USP43Q70EL4 1123 aa17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 OR9Q1Q8NGQ5 310 aa17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 TBC1D15Q8TC07 691 aa17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 KISS1RQ969F8 398 aaPredicted RBP17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 SECISBP2Q96T21 854 aaKnown RBP17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 DDOQ99489 341 aa17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 TEAD3Q99594 435 aa17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 ZNF649Q9BS31 505 aa17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 SEC14L4Q9UDX3 406 aa17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 TMED7Q9Y3B3 224 aa17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 IER3IP1Q9Y5U9 82 aa17.82■□□□□ 0.44
CTDSP2-204ENST00000548823 FAM183AA6NL82 134 aa17.81■□□□□ 0.44
CTDSP2-204ENST00000548823 FIGNL2A6NMB9 653 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms