RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 MDGA2Q7Z553 956 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 OR6V1Q8N148 313 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 GALNT16Q8N428 558 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 OR6X1Q8NH79 312 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 ASB10Q8WXI3 467 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 TM9SF4Q92544 642 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 PNPLA2Q96AD5 504 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 C4orf36Q96KX1 117 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 TBX5Q99593 518 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 CENPOQ9BU64 300 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 NUAK2Q9H093 628 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 TSPAN10Q9H1Z9 355 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-215ENST00000547672 SYT4Q9H2B2 425 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 ASCL3Q9NQ33 180 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 TXNL4BQ9NX01 149 aaKnown RBP12.07□□□□□ -0.48
PTCH1-215ENST00000547672 IL17BQ9UHF5 180 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 A0A075B6Q4 140 aa12.06□□□□□ -0.48
PTCH1-215ENST00000547672 METTL15A6NJ78 407 aa12.06□□□□□ -0.48
PTCH1-215ENST00000547672 AQP7P3A6NL99 342 aa12.06□□□□□ -0.48
PTCH1-215ENST00000547672 CLDN25C9JDP6 229 aa12.06□□□□□ -0.48
PTCH1-215ENST00000547672 SLC16A7O60669 478 aa12.06□□□□□ -0.48
PTCH1-215ENST00000547672 GATBO75879 557 aaKnown RBP12.06□□□□□ -0.48
PTCH1-215ENST00000547672 RGS9O75916 674 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-215ENST00000547672 ZNF432O94892 652 aa12.06□□□□□ -0.48
PTCH1-215ENST00000547672 IGHG1P01857 330 aa12.06□□□□□ -0.48
PTCH1-215ENST00000547672 HRGP04196 525 aa12.06□□□□□ -0.48
PTCH1-215ENST00000547672 IFNGR1P15260 489 aa12.06□□□□□ -0.48
PTCH1-215ENST00000547672 CFL1P23528 166 aaKnown RBP12.06□□□□□ -0.48
PTCH1-215ENST00000547672 PYCR1P32322 319 aa12.06□□□□□ -0.48
PTCH1-215ENST00000547672 SFTPDP35247 375 aa12.06□□□□□ -0.48
PTCH1-215ENST00000547672 AGFG1P52594 562 aaKnown RBP12.06□□□□□ -0.48
PTCH1-215ENST00000547672 RPS3AP61247 264 aaKnown RBP12.06□□□□□ -0.48
PTCH1-215ENST00000547672 POU3F1Q03052 451 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-215ENST00000547672 ZNF468Q5VIY5 522 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-215ENST00000547672 SLC18B1Q6NT16 456 aa12.06□□□□□ -0.48
PTCH1-215ENST00000547672 B3GLCTQ6Y288 498 aa12.06□□□□□ -0.48
PTCH1-215ENST00000547672 ESPNLQ6ZVH7 1005 aa12.06□□□□□ -0.48
PTCH1-215ENST00000547672 TPRA1Q86W33 373 aa12.06□□□□□ -0.48
PTCH1-215ENST00000547672 TIGD4Q8IY51 512 aa12.06□□□□□ -0.48
PTCH1-215ENST00000547672 PM20D2Q8IYS1 436 aa12.06□□□□□ -0.48
PTCH1-215ENST00000547672 OR51L1Q8NGJ5 315 aa12.06□□□□□ -0.48
PTCH1-215ENST00000547672 SLC25A44Q96H78 314 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-215ENST00000547672 TTYH2Q9BSA4 534 aa12.06□□□□□ -0.48
PTCH1-215ENST00000547672 SF3B5Q9BWJ5 86 aaKnown RBP12.06□□□□□ -0.48
PTCH1-215ENST00000547672 OR2B2Q9GZK3 357 aa12.06□□□□□ -0.48
PTCH1-215ENST00000547672 PAQR5Q9NXK6 330 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-215ENST00000547672 QPCTLQ9NXS2 382 aa12.06□□□□□ -0.48
PTCH1-215ENST00000547672 GALNT8Q9NY28 637 aa12.06□□□□□ -0.48
PTCH1-215ENST00000547672 KCNG2Q9UJ96 466 aa12.06□□□□□ -0.48
PTCH1-215ENST00000547672 SF3B6Q9Y3B4 125 aaKnown RBP12.06□□□□□ -0.48
PTCH1-215ENST00000547672 OTOGLQ3ZCN5 2332 aa12.06□□□□□ -0.48
PTCH1-215ENST00000547672 PCNX3Q9H6A9 2034 aa12.06□□□□□ -0.48
PTCH1-215ENST00000547672 TMEM127O75204 238 aa12.05□□□□□ -0.48
PTCH1-215ENST00000547672 TRAPPC6AO75865 159 aa12.05□□□□□ -0.48
PTCH1-215ENST00000547672 ARL6IP5O75915 188 aa12.05□□□□□ -0.48
PTCH1-215ENST00000547672 PLGP00747 810 aaPredicted RBP12.05□□□□□ -0.48
PTCH1-215ENST00000547672 GDF1P27539 372 aa12.05□□□□□ -0.48
PTCH1-215ENST00000547672 NAA10P41227 235 aaPredicted RBP12.05□□□□□ -0.48
PTCH1-215ENST00000547672 DNASE1L1P49184 302 aa12.05□□□□□ -0.48
PTCH1-215ENST00000547672 CLRN1P58418 232 aa12.05□□□□□ -0.48
PTCH1-215ENST00000547672 RAC3P60763 192 aa12.05□□□□□ -0.48
PTCH1-215ENST00000547672 GPR85P60893 370 aa12.05□□□□□ -0.48
PTCH1-215ENST00000547672 MFAP5Q13361 173 aa12.05□□□□□ -0.48
PTCH1-215ENST00000547672 POU4F3Q15319 338 aa12.05□□□□□ -0.48
PTCH1-215ENST00000547672 OR1C1Q15619 314 aa12.05□□□□□ -0.48
PTCH1-215ENST00000547672 INPP5JQ15735 1006 aaPredicted RBP12.05□□□□□ -0.48
PTCH1-215ENST00000547672 TEX30Q5JUR7 227 aa12.05□□□□□ -0.48
PTCH1-215ENST00000547672 SLC25A25Q6KCM7 469 aa12.05□□□□□ -0.48
PTCH1-215ENST00000547672 CDC20BQ86Y33 519 aa12.05□□□□□ -0.48
PTCH1-215ENST00000547672 TEX19Q8NA77 164 aa12.05□□□□□ -0.48
PTCH1-215ENST00000547672 ZNF511Q8NB15 262 aa12.05□□□□□ -0.48
PTCH1-215ENST00000547672 OR2M7Q8NG81 312 aa12.05□□□□□ -0.48
PTCH1-215ENST00000547672 OR6Q1Q8NGQ2 317 aa12.05□□□□□ -0.48
PTCH1-215ENST00000547672 HAS2Q92819 552 aa12.05□□□□□ -0.48
PTCH1-215ENST00000547672 SFXN2Q96NB2 322 aa12.05□□□□□ -0.48
PTCH1-215ENST00000547672 KCNK17Q96T54 332 aa12.05□□□□□ -0.48
PTCH1-215ENST00000547672 SLIRPQ9GZT3 109 aaKnown RBP12.05□□□□□ -0.48
PTCH1-215ENST00000547672 NXF2Q9GZY0 626 aaKnown RBP12.05□□□□□ -0.48
PTCH1-215ENST00000547672 RERGLQ9H628 205 aa12.05□□□□□ -0.48
PTCH1-215ENST00000547672 ISG20L2Q9H9L3 353 aaKnown RBP12.05□□□□□ -0.48
PTCH1-215ENST00000547672 GNG8Q9UK08 70 aa12.05□□□□□ -0.48
PTCH1-215ENST00000547672 MRPS18BQ9Y676 258 aaKnown RBP12.05□□□□□ -0.48
PTCH1-215ENST00000547672 TRBV2A0A0J9YWF9 115 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 OR5H15A6NDH6 313 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 ZNF891A8MT65 544 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-215ENST00000547672 B4DXG7 233 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 TAF4O00268 1085 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 ZNF593O00488 134 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-215ENST00000547672 SELENOFO60613 162 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 ZNF254O75437 659 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 AQP8O94778 261 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 SP1P08047 785 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 MYL9P24844 172 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 ENTPD1P49961 510 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 BIDP55957 195 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 CARD18P57730 90 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 OR12D2P58182 307 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 RPS25P62851 125 aaKnown RBP12.04□□□□□ -0.48
PTCH1-215ENST00000547672 H3F3AP84243 136 aa12.04□□□□□ -0.48
PTCH1-215ENST00000547672 ZNF45Q02386 682 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms