RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 ZNF426Q9BUY5 554 aa11.51□□□□□ -0.57
CPSF6-204ENST00000547486 PCDHAC1Q9H158 963 aa11.51□□□□□ -0.57
CPSF6-204ENST00000547486 VIPAS39Q9H9C1 493 aa11.51□□□□□ -0.57
CPSF6-204ENST00000547486 B3GAT2Q9NPZ5 323 aa11.51□□□□□ -0.57
CPSF6-204ENST00000547486 MEPEQ9NQ76 525 aaPredicted RBP11.51□□□□□ -0.57
CPSF6-204ENST00000547486 GLTPQ9NZD2 209 aa11.51□□□□□ -0.57
CPSF6-204ENST00000547486 RTTNQ86VV8 2226 aa11.5□□□□□ -0.57
CPSF6-204ENST00000547486 LOC100289279A0A1B0GTE1 492 aa11.5□□□□□ -0.57
CPSF6-204ENST00000547486 LRP5LA4QPB2 252 aa11.5□□□□□ -0.57
CPSF6-204ENST00000547486 VSTM5A8MXK1 200 aa11.5□□□□□ -0.57
CPSF6-204ENST00000547486 LYNX1G3V0Z9 82 aa11.5□□□□□ -0.57
CPSF6-204ENST00000547486 FXYD1O00168 92 aa11.5□□□□□ -0.57
CPSF6-204ENST00000547486 OR6A2O95222 327 aa11.5□□□□□ -0.57
CPSF6-204ENST00000547486 ASAH2BP0C7U1 165 aa11.5□□□□□ -0.57
CPSF6-204ENST00000547486 LYNX1P0DP58 116 aa11.5□□□□□ -0.57
CPSF6-204ENST00000547486 APEHP13798 732 aaKnown RBP11.5□□□□□ -0.57
CPSF6-204ENST00000547486 ZNF23P17027 643 aa11.5□□□□□ -0.57
CPSF6-204ENST00000547486 TNFRSF1BP20333 461 aa11.5□□□□□ -0.57
CPSF6-204ENST00000547486 IGFBP5P24593 272 aa11.5□□□□□ -0.57
CPSF6-204ENST00000547486 IL2RGP31785 369 aa11.5□□□□□ -0.57
CPSF6-204ENST00000547486 CSNK1A1P48729 337 aa11.5□□□□□ -0.57
CPSF6-204ENST00000547486 SF3A3Q12874 501 aaKnown RBP eCLIP11.5□□□□□ -0.57
CPSF6-204ENST00000547486 MELKQ14680 651 aa11.5□□□□□ -0.57
CPSF6-204ENST00000547486 RAB39AQ14964 217 aa11.5□□□□□ -0.57
CPSF6-204ENST00000547486 IL17RELQ6ZVW7 336 aa11.5□□□□□ -0.57
CPSF6-204ENST00000547486 LRP11Q86VZ4 500 aa11.5□□□□□ -0.57
CPSF6-204ENST00000547486 CALHM3Q86XJ0 350 aa11.5□□□□□ -0.57
CPSF6-204ENST00000547486 ZNF584Q8IVC4 421 aa11.5□□□□□ -0.57
CPSF6-204ENST00000547486 SLC30A8Q8IWU4 369 aa11.5□□□□□ -0.57
CPSF6-204ENST00000547486 PHC2Q8IXK0 858 aa11.5□□□□□ -0.57
CPSF6-204ENST00000547486 SLC26A7Q8TE54 656 aa11.5□□□□□ -0.57
CPSF6-204ENST00000547486 NEU4Q8WWR8 484 aaPredicted RBP11.5□□□□□ -0.57
CPSF6-204ENST00000547486 TMEM120AQ9BXJ8 343 aa11.5□□□□□ -0.57
CPSF6-204ENST00000547486 MRPL37Q9BZE1 423 aaKnown RBP11.5□□□□□ -0.57
CPSF6-204ENST00000547486 MYOZ1Q9NP98 299 aaPredicted RBP11.5□□□□□ -0.57
CPSF6-204ENST00000547486 NANSQ9NR45 359 aa11.5□□□□□ -0.57
CPSF6-204ENST00000547486 CMAHPQ9Y471 501 aa11.5□□□□□ -0.57
CPSF6-204ENST00000547486 PHF1O43189 567 aaPredicted RBP11.49□□□□□ -0.57
CPSF6-204ENST00000547486 RNF13O43567 381 aa11.49□□□□□ -0.57
CPSF6-204ENST00000547486 LILRA1O75019 489 aa11.49□□□□□ -0.57
CPSF6-204ENST00000547486 GIFP27352 417 aa11.49□□□□□ -0.57
CPSF6-204ENST00000547486 RUNX1T1Q06455 604 aa11.49□□□□□ -0.57
CPSF6-204ENST00000547486 FXNQ16595 210 aa11.49□□□□□ -0.57
CPSF6-204ENST00000547486 FAM120AOSQ5T036 256 aa11.49□□□□□ -0.57
CPSF6-204ENST00000547486 INTS11Q5TA45 600 aaKnown RBP11.49□□□□□ -0.57
CPSF6-204ENST00000547486 FAM166AQ6J272 317 aa11.49□□□□□ -0.57
CPSF6-204ENST00000547486 PIWIL3Q7Z3Z3 882 aaKnown RBP11.49□□□□□ -0.57
CPSF6-204ENST00000547486 NKAIN4Q8IVV8 208 aa11.49□□□□□ -0.57
CPSF6-204ENST00000547486 ZNF786Q8N393 782 aa11.49□□□□□ -0.57
CPSF6-204ENST00000547486 SLC22A24Q8N4F4 322 aa11.49□□□□□ -0.57
CPSF6-204ENST00000547486 ZNF540Q8NDQ6 660 aa11.49□□□□□ -0.57
CPSF6-204ENST00000547486 ZNF566Q969W8 418 aa11.49□□□□□ -0.57
CPSF6-204ENST00000547486 MRPL24Q96A35 216 aaKnown RBP11.49□□□□□ -0.57
CPSF6-204ENST00000547486 LRRC58Q96CX6 371 aa11.49□□□□□ -0.57
CPSF6-204ENST00000547486 SLC25A44Q96H78 314 aaPredicted RBP11.49□□□□□ -0.57
CPSF6-204ENST00000547486 MPP4Q96JB8 637 aa11.49□□□□□ -0.57
CPSF6-204ENST00000547486 ZNF583Q96ND8 569 aa11.49□□□□□ -0.57
CPSF6-204ENST00000547486 SH3GL3Q99963 347 aa11.49□□□□□ -0.57
CPSF6-204ENST00000547486 SIKE1Q9BRV8 207 aa11.49□□□□□ -0.57
CPSF6-204ENST00000547486 SLC19A3Q9BZV2 496 aa11.49□□□□□ -0.57
CPSF6-204ENST00000547486 SHARPINQ9H0F6 387 aa11.49□□□□□ -0.57
CPSF6-204ENST00000547486 TPK1Q9H3S4 243 aa11.49□□□□□ -0.57
CPSF6-204ENST00000547486 CHODLQ9H9P2 273 aa11.49□□□□□ -0.57
CPSF6-204ENST00000547486 ZNF229Q9UJW7 825 aa11.49□□□□□ -0.57
CPSF6-204ENST00000547486 FZR1Q9UM11 496 aa11.49□□□□□ -0.57
CPSF6-204ENST00000547486 SH3GLB1Q9Y371 365 aa11.49□□□□□ -0.57
CPSF6-204ENST00000547486 MXRA5Q9NR99 2828 aa11.49□□□□□ -0.57
CPSF6-204ENST00000547486 BLOC1S5-TXNDC5H3BN57 136 aa11.48□□□□□ -0.57
CPSF6-204ENST00000547486 SHOX2O60902 331 aaPredicted RBP11.48□□□□□ -0.57
CPSF6-204ENST00000547486 TGFAP01135 160 aa11.48□□□□□ -0.57
CPSF6-204ENST00000547486 HIST1H2ABP04908 130 aa11.48□□□□□ -0.57
CPSF6-204ENST00000547486 QDPRP09417 244 aa11.48□□□□□ -0.57
CPSF6-204ENST00000547486 PGA4P0DJD7 388 aa11.48□□□□□ -0.57
CPSF6-204ENST00000547486 PGA3P0DJD8 388 aa11.48□□□□□ -0.57
CPSF6-204ENST00000547486 GLRXP35754 106 aa11.48□□□□□ -0.57
CPSF6-204ENST00000547486 EVX1P49640 407 aa11.48□□□□□ -0.57
CPSF6-204ENST00000547486 SEC24CP53992 1094 aa11.48□□□□□ -0.57
CPSF6-204ENST00000547486 SRSF2Q01130 221 aaKnown RBP11.48□□□□□ -0.57
CPSF6-204ENST00000547486 RIN1Q13671 783 aa11.48□□□□□ -0.57
CPSF6-204ENST00000547486 CYLC2Q14093 348 aaPredicted RBP11.48□□□□□ -0.57
CPSF6-204ENST00000547486 HIST3H3Q16695 136 aa11.48□□□□□ -0.57
CPSF6-204ENST00000547486 TRMT5Q32P41 509 aaKnown RBP11.48□□□□□ -0.57
CPSF6-204ENST00000547486 CGB2Q6NT52 195 aa11.48□□□□□ -0.57
CPSF6-204ENST00000547486 HIST3H2AQ7L7L0 130 aa11.48□□□□□ -0.57
CPSF6-204ENST00000547486 CARM1Q86X55 608 aa11.48□□□□□ -0.57
CPSF6-204ENST00000547486 SNX32Q86XE0 403 aa11.48□□□□□ -0.57
CPSF6-204ENST00000547486 PAQR4Q8N4S7 273 aaPredicted RBP11.48□□□□□ -0.57
CPSF6-204ENST00000547486 PFN4Q8NHR9 129 aa11.48□□□□□ -0.57
CPSF6-204ENST00000547486 UBASH3BQ8TF42 649 aa11.48□□□□□ -0.57
CPSF6-204ENST00000547486 TMEM255BQ8WV15 326 aa11.48□□□□□ -0.57
CPSF6-204ENST00000547486 HIST1H2ACQ93077 130 aa11.48□□□□□ -0.57
CPSF6-204ENST00000547486 SYT3Q9BQG1 590 aa11.48□□□□□ -0.57
CPSF6-204ENST00000547486 DENND2DQ9H6A0 471 aaPredicted RBP11.48□□□□□ -0.57
CPSF6-204ENST00000547486 DYNLRB1Q9NP97 96 aa11.48□□□□□ -0.57
CPSF6-204ENST00000547486 C20orf141Q9NUB4 165 aa11.48□□□□□ -0.57
CPSF6-204ENST00000547486 TMEM38BQ9NVV0 291 aa11.48□□□□□ -0.57
CPSF6-204ENST00000547486 MYEF2Q9P2K5 600 aaKnown RBP11.48□□□□□ -0.57
CPSF6-204ENST00000547486 LPAR3Q9UBY5 353 aa11.48□□□□□ -0.57
CPSF6-204ENST00000547486 REV1Q9UBZ9 1251 aa11.48□□□□□ -0.57
CPSF6-204ENST00000547486 FBXO9Q9UK97 447 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms