RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 NLRC3Q7RTR2 1065 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 MAP6Q96JE9 813 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 PLA2G12AQ9BZM1 189 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 CYSLTR2Q9NS75 346 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 DAPP1Q9UN19 280 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 A4GNTQ9UNA3 340 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 MRPS28Q9Y2Q9 187 aaKnown RBP11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 OR6C65A6NJZ3 312 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 GJE1A6NN92 205 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 UTS2O95399 124 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 DRD1P21728 446 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 MFGE8Q08431 387 aaPredicted RBP11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 WDR88Q6ZMY6 472 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 MDGA2Q7Z553 956 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 C19orf47Q8N9M1 422 aaKnown RBP11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 C3orf49Q96BT1 292 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 OR52A5Q9H2C5 316 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 KIR3DX1Q9H7L2 352 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 SCPEP1Q9HB40 452 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 KIF25Q9UIL4 384 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 SSX4O60224 188 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 ATG12O94817 140 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 OR2F2O95006 317 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 WDPCPO95876 746 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 SPI1P17947 270 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 ITGB8P26012 769 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 OR2F1Q13607 317 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 Q6ZNB5 142 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 LIX1LQ8IVB5 337 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 ZBTB44Q8NCP5 570 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 OR10R2Q8NGX6 335 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 SLC25A32Q9H2D1 315 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 HCFC2Q9Y5Z7 792 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 P2RY10O00398 339 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 HCRTR1O43613 425 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 NUDT21O43809 227 aaKnown RBP11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 RAE1P78406 368 aaKnown RBP11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 ACSM1Q08AH1 577 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 SIGIRRQ6IA17 410 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 OR5M10Q6IEU7 315 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 FAM57BQ71RH2 274 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 IL17RCQ8NAC3 791 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 OR5T1Q8NG75 326 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 SMIM4Q8WVI0 70 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 TCTN2Q96GX1 697 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 TOX2Q96NM4 488 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 ELF4Q99607 663 aaPredicted RBP11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 ABCA3Q99758 1704 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 AUNIPQ9H7T9 357 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 MED16Q9Y2X0 877 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 HRH3Q9Y5N1 445 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 OIP5O43482 229 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 CD22P20273 847 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 HMGA2P52926 109 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 FLI1Q01543 452 aaPredicted RBP11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 EXOSC6Q5RKV6 272 aaKnown RBP11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 ADIPOR2Q86V24 386 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 LDAHQ9H6V9 325 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 SMCO4Q9NRQ5 59 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 SLC23A1Q9UHI7 598 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 PLEKHM1Q9Y4G2 1056 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 COL4A1P02462 1669 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 GALR3O60755 368 aaPredicted RBP11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 CTNSO60931 367 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 CNR1P21554 472 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 MMP15P51511 669 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 ZP2Q05996 745 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 H3F3CQ6NXT2 135 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 TPSD1Q9BZJ3 242 aa11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 NXF5Q9H1B4 397 aaKnown RBP11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 THAP10Q9P2Z0 257 aaPredicted RBP11.23□□□□□ -0.61
NPC1L1-204ENST00000546276 FER1L6Q2WGJ9 1857 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 CCSO14618 274 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 ZNF217O75362 1048 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 IGHA2P01877 340 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 SMAD2Q15796 467 aaKnown RBP11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 SLC25A35Q3KQZ1 300 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 MANEAQ5SRI9 462 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 FCRL6Q6DN72 434 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 CMSS1Q9BQ75 279 aaKnown RBP11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 NUDT22Q9BRQ3 303 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 KCNIP1Q9NZI2 227 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 KLHL13Q9P2N7 655 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 RPH3AQ9Y2J0 694 aaPredicted RBP11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 TMED7-TICAM2A0A0A6YYA0 188 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 SERTM1A2A2V5 107 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 MAGEB4O15481 346 aaPredicted RBP11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 DOK2O60496 412 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 IFNA4P05014 189 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 HBQ1P09105 142 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 EPXP11678 715 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 YPEL5P62699 121 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 RPL23AP62750 156 aaKnown RBP11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 PMPCAQ10713 525 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 FAM27D1Q5T7N8 215 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 WDSUB1Q8N9V3 476 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 LCORQ96JN0 433 aaPredicted RBP11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 VN1R3Q9BXE9 311 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 NMNAT2Q9BZQ4 307 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 493.5 ms