RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 PGA3P0DJD8 388 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 HLA-DOBP13765 273 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 HIST1H1CP16403 213 aaKnown RBP14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 GABRB1P18505 474 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 AGTR1P30556 359 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 CEACAM8P31997 349 aaPredicted RBP14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 BIDP55957 195 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 CLDN17P56750 224 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 IL5RAQ01344 420 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 MAD2L1BPQ15013 274 aaPredicted RBP14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 HIST3H3Q16695 136 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 TMEM236Q5W0B7 351 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 MTFR2Q6P444 385 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 ABHD12BQ7Z5M8 362 aaPredicted RBP14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 IGFN1Q86VF2 1251 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 DOLPP1Q86YN1 238 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 ENTHD1Q8IYW4 607 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 TMEM123Q8N131 208 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 KDM8Q8N371 416 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 ZIC4Q8N9L1 334 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 NPEPL1Q8NDH3 523 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 NOXO1Q8NFA2 376 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 OR2T4Q8NH00 348 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 DDOQ99489 341 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 SFXN3Q9BWM7 321 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 YTHDF1Q9BYJ9 559 aaKnown RBP14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 NMNAT2Q9BZQ4 307 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 RACGAP1Q9H0H5 632 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 ASB6Q9NWX5 421 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 FAM215AQ9Y5M1 114 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 ESPL1Q14674 2120 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 IRGMA1A4Y4 181 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 SLC35F4A4IF30 521 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 HSPB2A8KAH6 182 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 KDM4EB2RXH2 506 aaPredicted RBP14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 WISP2O76076 250 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 STSP08842 583 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 CA7P43166 264 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 MLLT10P55197 1068 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 TOP3AQ13472 1001 aaPredicted RBP14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 HSPB2Q16082 182 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 NRN1LQ496H8 165 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 ZNF362Q5T0B9 420 aaPredicted RBP14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 C1QTNF12Q5T7M4 302 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 LCN1P1Q5VSP4 162 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 CXXC5Q7LFL8 322 aaKnown RBP14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 AAED1Q7RTV5 226 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 CCDC71Q8IV32 467 aaPredicted RBP14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 TCEANCQ8N8B7 351 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 SLC37A3Q8NCC5 494 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 OR52E2Q8NGJ4 325 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 RASD2Q96D21 266 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 OR2M2Q96R28 347 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 CLN6Q9NWW5 311 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 MED29Q9NX70 200 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 FOXD3Q9UJU5 478 aaPredicted RBP14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 BLOC1S6Q9UL45 172 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 RNF6Q9Y252 685 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 SLC22A23A1A5C7 686 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 B8ZZF3 427 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 ARHGEF9O43307 516 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 TLX2O43763 284 aaPredicted RBP14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 TRMUO75648 421 aaKnown RBP14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 SERPINI2O75830 405 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 CCDC159P0C7I6 412 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 CSNK1A1P48729 337 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 PER3P56645 1201 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 CLRN1P58418 232 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 POU4F2Q12837 409 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 CRMP1Q14194 572 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 C10orf128Q5T292 105 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 AADACL4Q5VUY2 407 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 RTL6Q6ICC9 239 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 LEG1Q6P5S2 330 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 RPTNQ6XPR3 784 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 ZBTB46Q86UZ6 589 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 ATCAYQ86WG3 371 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 C20orf196Q8IYI0 205 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 OR4K13Q8NH42 304 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 TMEM54Q969K7 222 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 APH1AQ96BI3 265 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 NMD3Q96D46 503 aaKnown RBP14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 ZNF385AQ96PM9 386 aaKnown RBP14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 TTYH2Q9BSA4 534 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 SLCO5A1Q9H2Y9 848 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 PLCXD1Q9NUJ7 323 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 HAO2Q9NYQ3 351 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 ZNF226Q9NYT6 803 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 GLTPQ9NZD2 209 aa14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 H2AFY2Q9P0M6 372 aaPredicted RBP14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 WARS2Q9UGM6 360 aaKnown RBP14.21□□□□□ -0.14
PRPF40A-212ENST00000545856 FREM1Q5H8C1 2179 aa14.2□□□□□ -0.14
PRPF40A-212ENST00000545856 RPL36A-HNRNPH2H7BZ11 118 aa14.2□□□□□ -0.14
PRPF40A-212ENST00000545856 PRKYO43930 277 aa14.2□□□□□ -0.14
PRPF40A-212ENST00000545856 GNAO1P09471 354 aa14.2□□□□□ -0.14
PRPF40A-212ENST00000545856 CD8BP10966 210 aa14.2□□□□□ -0.14
PRPF40A-212ENST00000545856 KLK2P20151 261 aa14.2□□□□□ -0.14
PRPF40A-212ENST00000545856 OPRM1P35372 400 aa14.2□□□□□ -0.14
PRPF40A-212ENST00000545856 CDKN2AP42771 156 aaKnown RBP14.2□□□□□ -0.14
PRPF40A-212ENST00000545856 OR3A2P47893 321 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms