RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 GAL3ST1Q99999 423 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 NRSN2Q9GZP1 204 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 LOC105371267A0A1B0GV96 52 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 FAM221BA6H8Z2 402 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 NAP1L6A6NFF2 107 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 OR4C45A6NMZ5 311 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 C11orf98E9PRG8 122 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 ACOT7O00154 380 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 RAB40ALP0C0E4 278 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 THEGLP0DJG4 465 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 VSIG10L2P0DP72 767 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 UBL4AP11441 157 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 FZD2Q14332 565 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 PCGF3Q3KNV8 242 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 BIVMQ86UB2 503 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 ZNF595Q8IYB9 648 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 PM20D2Q8IYS1 436 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 RAB40AQ8WXH6 277 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 TAAR8Q969N4 342 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 NXF5Q9H1B4 397 aaKnown RBP14.34□□□□□ -0.11
LDLR-204ENST00000545707 PNO1Q9NRX1 252 aaKnown RBP14.34□□□□□ -0.11
LDLR-204ENST00000545707 TAS2R5Q9NYW4 299 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 MAB21L2Q9Y586 359 aa14.34□□□□□ -0.11
LDLR-204ENST00000545707 C17orf105B2RV13 164 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 KDM4BO94953 1096 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 PLGP00747 810 aaPredicted RBP14.33□□□□□ -0.12
LDLR-204ENST00000545707 ASAH2BP0C7U1 165 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 CALCBP10092 127 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 CENPAP49450 140 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 SKP2Q13309 424 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 TOMM34Q15785 309 aaPredicted RBP14.33□□□□□ -0.12
LDLR-204ENST00000545707 ISXQ2M1V0 245 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 GLRX5Q86SX6 157 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 CDH24Q86UP0 819 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 ZNF563Q8TA94 476 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 ADOQ96SZ5 270 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 NKX2-4Q9H2Z4 354 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 ZNF275Q9NSD4 429 aaPredicted RBP14.33□□□□□ -0.12
LDLR-204ENST00000545707 KCNG2Q9UJ96 466 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 GTF2A1LQ9UNN4 478 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 TRBV5-5A0A0J9YX44 114 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 A0A1W2PPL8 197 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 TEX46H3BTG2 121 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 SULT1B1O43704 296 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 CREBL2O60519 120 aaPredicted RBP14.33□□□□□ -0.12
LDLR-204ENST00000545707 GLSO94925 669 aaPredicted RBP14.33□□□□□ -0.12
LDLR-204ENST00000545707 IFNGR1P15260 489 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 TACR3P29371 465 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 SLC25A1P53007 311 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 RAB14P61106 215 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 IGLV3-21P80748 117 aaPredicted RBP14.33□□□□□ -0.12
LDLR-204ENST00000545707 SHHQ15465 462 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 OLFML2AQ68BL7 652 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 LRRN1Q6UXK5 716 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 OR5M1Q8NGP8 315 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 GSX2Q9BZM3 304 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 CYP8B1Q9UNU6 501 aa14.33□□□□□ -0.12
LDLR-204ENST00000545707 PLSCR5A0PG75 271 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 POM121CA8CG34 1229 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 DOK2O60496 412 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 NDUFB6O95139 128 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 RLN1P04808 185 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 GUSBP08236 651 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 RABIFP47224 123 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 DMWDQ09019 674 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 FNDC7Q5VTL7 733 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 TMEM65Q6PI78 240 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 OR4C16Q8NGL9 310 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 DVL3Q92997 716 aaPredicted RBP14.32□□□□□ -0.12
LDLR-204ENST00000545707 SLC19A3Q9BZV2 496 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 OR8D2Q9GZM6 311 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 UBQLN4Q9NRR5 601 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 RDH8Q9NYR8 311 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 KCNN3Q9UGI6 736 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 SPTY2D1-AS1A0A0U1RR47 76 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 L7N2F9 121 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 SCDO00767 359 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 UTS2O95399 124 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 PROS1P07225 676 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 RRASP10301 218 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 PNMTP11086 282 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 ALOX5APP20292 161 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 KIR3DL2P43630 455 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.32□□□□□ -0.12
LDLR-204ENST00000545707 ZNF626Q68DY1 528 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 BPHLQ86WA6 291 aaPredicted RBP14.32□□□□□ -0.12
LDLR-204ENST00000545707 OR8S1Q8NH09 359 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 RADILQ96JH8 1075 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 LCORQ96JN0 433 aaPredicted RBP14.32□□□□□ -0.12
LDLR-204ENST00000545707 EMC3Q9P0I2 261 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 CLEC1BQ9P126 229 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 MOKQ9UQ07 419 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 SLC22A13Q9Y226 551 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 HS3ST3A1Q9Y663 406 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 SEC16AO15027 2179 aa14.32□□□□□ -0.12
LDLR-204ENST00000545707 OR5K4A6NMS3 321 aa14.31□□□□□ -0.12
LDLR-204ENST00000545707 ZNF264O43296 627 aa14.31□□□□□ -0.12
LDLR-204ENST00000545707 RBBP9O75884 186 aa14.31□□□□□ -0.12
LDLR-204ENST00000545707 HLA-DQA2P01906 255 aa14.31□□□□□ -0.12
LDLR-204ENST00000545707 FAM198BQ6UWH4 519 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms