RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 GPR55Q9Y2T6 319 aaPredicted RBP11.53□□□□□ -0.56
COL4A6-209ENST00000545689 DOCK1Q14185 1865 aa11.52□□□□□ -0.56
COL4A6-209ENST00000545689 ARRB2P32121 409 aa11.52□□□□□ -0.56
COL4A6-209ENST00000545689 CATR1Q13166 79 aa11.52□□□□□ -0.56
COL4A6-209ENST00000545689 CALHM3Q86XJ0 350 aa11.52□□□□□ -0.56
COL4A6-209ENST00000545689 SLC7A6Q92536 515 aa11.52□□□□□ -0.56
COL4A6-209ENST00000545689 NKX3-1Q99801 234 aaPredicted RBP11.52□□□□□ -0.56
COL4A6-209ENST00000545689 TNFRSF12AQ9NP84 129 aa11.52□□□□□ -0.56
COL4A6-209ENST00000545689 FGF20Q9NP95 211 aaPredicted RBP11.52□□□□□ -0.56
COL4A6-209ENST00000545689 MYOTQ9UBF9 498 aa11.52□□□□□ -0.56
COL4A6-209ENST00000545689 H7C1Q1 480 aa11.52□□□□□ -0.56
COL4A6-209ENST00000545689 I6L893 689 aaPredicted RBP11.52□□□□□ -0.56
COL4A6-209ENST00000545689 K7ESM1 405 aa11.52□□□□□ -0.56
COL4A6-209ENST00000545689 TIGD3Q6B0B8 471 aa11.52□□□□□ -0.56
COL4A6-209ENST00000545689 ESPNLQ6ZVH7 1005 aa11.52□□□□□ -0.56
COL4A6-209ENST00000545689 BCDIN3DQ7Z5W3 292 aaKnown RBP11.52□□□□□ -0.56
COL4A6-209ENST00000545689 GOT1L1Q8NHS2 421 aaPredicted RBP11.52□□□□□ -0.56
COL4A6-209ENST00000545689 FOXN4Q96NZ1 517 aa11.52□□□□□ -0.56
COL4A6-209ENST00000545689 DNAJB11Q9UBS4 358 aa11.52□□□□□ -0.56
COL4A6-209ENST00000545689 LHX6Q9UPM6 363 aa11.52□□□□□ -0.56
COL4A6-209ENST00000545689 EMC9Q9Y3B6 208 aa11.52□□□□□ -0.56
COL4A6-209ENST00000545689 ENPP1P22413 925 aa11.52□□□□□ -0.57
COL4A6-209ENST00000545689 NLGN4YQ8NFZ3 816 aaPredicted RBP11.52□□□□□ -0.57
COL4A6-209ENST00000545689 BAHD1Q8TBE0 780 aaPredicted RBP11.52□□□□□ -0.57
COL4A6-209ENST00000545689 LAT2Q9GZY6 243 aa11.52□□□□□ -0.57
COL4A6-209ENST00000545689 FGF22Q9HCT0 170 aa11.52□□□□□ -0.57
COL4A6-209ENST00000545689 ZNF749O43361 778 aa11.52□□□□□ -0.57
COL4A6-209ENST00000545689 C1QBP02746 253 aa11.52□□□□□ -0.57
COL4A6-209ENST00000545689 PAPD4Q6PIY7 484 aaKnown RBP11.52□□□□□ -0.57
COL4A6-209ENST00000545689 RLN3Q8WXF3 142 aa11.52□□□□□ -0.57
COL4A6-209ENST00000545689 MSI2Q96DH6 328 aaKnown RBP11.52□□□□□ -0.57
COL4A6-209ENST00000545689 NUDT22Q9BRQ3 303 aa11.52□□□□□ -0.57
COL4A6-209ENST00000545689 CNTNAP3Q9BZ76 1288 aa11.52□□□□□ -0.57
COL4A6-209ENST00000545689 ULBP3Q9BZM4 244 aa11.52□□□□□ -0.57
COL4A6-209ENST00000545689 CXXC1Q9P0U4 656 aaPredicted RBP11.52□□□□□ -0.57
COL4A6-209ENST00000545689 SELENOFO60613 162 aa11.52□□□□□ -0.57
COL4A6-209ENST00000545689 NSA2O95478 260 aaKnown RBP11.52□□□□□ -0.57
COL4A6-209ENST00000545689 HBE1P02100 147 aa11.52□□□□□ -0.57
COL4A6-209ENST00000545689 CHRNB1P11230 501 aa11.52□□□□□ -0.57
COL4A6-209ENST00000545689 HTR4Q13639 388 aa11.52□□□□□ -0.57
COL4A6-209ENST00000545689 Q6ZTK2 550 aa11.52□□□□□ -0.57
COL4A6-209ENST00000545689 OCSTAMPQ9BR26 566 aa11.52□□□□□ -0.57
COL4A6-209ENST00000545689 TMEM43Q9BTV4 400 aa11.52□□□□□ -0.57
COL4A6-209ENST00000545689 FGF21Q9NSA1 209 aa11.52□□□□□ -0.57
COL4A6-209ENST00000545689 MCRIP1C9JLW8 97 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 H0YIG0 161 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 TMPRSS11DO60235 418 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 ALOX12BO75342 701 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 PEX11BO96011 259 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 ZNF44P15621 663 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 S100A11P31949 105 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 ZNF93P35789 620 aaPredicted RBP11.51□□□□□ -0.57
COL4A6-209ENST00000545689 TPMTP51580 245 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 CLDN12P56749 244 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 ZNF674Q2M3X9 581 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 MDGA2Q7Z553 956 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 RBM45Q8IUH3 476 aaKnown RBP11.51□□□□□ -0.57
COL4A6-209ENST00000545689 NT5CQ8TCD5 201 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 SIGLEC6O43699 453 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 MED6O75586 246 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 HOXB5P09067 269 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 RFX2P48378 723 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 SLC9A3R2Q15599 337 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 COMTD1Q86VU5 262 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 RASD2Q96D21 266 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.51□□□□□ -0.57
COL4A6-209ENST00000545689 ANKRD33BA6NCL7 494 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 SLC34A2O95436 690 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 GIPP09681 153 aaPredicted RBP11.51□□□□□ -0.57
COL4A6-209ENST00000545689 DPP4P27487 766 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 RNF141Q8WVD5 230 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 OR6C1Q96RD1 312 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 SDHAF2Q9NX18 166 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 P2RY10O00398 339 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 GPR171O14626 319 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 TBX19O60806 448 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 GPX5O75715 221 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 CD1CP29017 333 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 SDHAP31040 664 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 EGR3Q06889 387 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 OR5M10Q6IEU7 315 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 LCN10Q6JVE6 187 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 GJC3Q8NFK1 279 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 TSSK2Q96PF2 358 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 HINT2Q9BX68 163 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 MMP17Q9ULZ9 603 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 COPS3Q9UNS2 423 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 RAB19A4D1S5 217 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 PLRG1O43660 514 aaKnown RBP11.51□□□□□ -0.57
COL4A6-209ENST00000545689 LIPCP11150 499 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 DIO1P49895 249 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 DOK3Q7L591 496 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 ASB13Q8WXK3 278 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 WBP2Q969T9 261 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 UTP23Q9BRU9 249 aaKnown RBP11.51□□□□□ -0.57
COL4A6-209ENST00000545689 FKRPQ9H9S5 495 aa11.51□□□□□ -0.57
COL4A6-209ENST00000545689 A0A1B0GV50 99 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 MSTNO14793 375 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 YY2O15391 372 aa11.5□□□□□ -0.57
COL4A6-209ENST00000545689 LALBAP00709 142 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms