RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 ZNF432O94892 652 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 LGI1O95970 557 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 OPN1SWP03999 348 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 LPLP06858 475 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 SOD3P08294 240 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 VIMP08670 466 aaKnown RBP6.71□□□□□ -1.34
SNHG1-223ENST00000545440 ZNF43P17038 809 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 GRPRP30550 384 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 SELENOPP49908 381 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 GZMMP51124 257 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 ZNF83P51522 516 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 ARFIP2P53365 341 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 FOXG1P55316 489 aaPredicted RBP6.71□□□□□ -1.34
SNHG1-223ENST00000545440 ATP5J2P56134 94 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 SLC25A3Q00325 362 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 CD83Q01151 205 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 CYLC2Q14093 348 aaPredicted RBP6.71□□□□□ -1.34
SNHG1-223ENST00000545440 OR1Q1Q15612 314 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 NRF1Q16656 503 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 DUSP7Q16829 419 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 VMACQ2NL98 169 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 PGGHGQ32M88 737 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 REP15Q6BDI9 236 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 CGB2Q6NT52 195 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 NIPAL3Q6P499 406 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 ERICH5Q6P6B1 374 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 CCDC80Q76M96 950 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 SMYD1Q8NB12 490 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 GPR32P1Q8NGA4 272 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 OR10A6Q8NH74 314 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 SMAP2Q8WU79 429 aaPredicted RBP6.71□□□□□ -1.34
SNHG1-223ENST00000545440 NEUROG1Q92886 237 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 TAAR8Q969N4 342 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 TAMM41Q96BW9 452 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 SLC25A36Q96CQ1 311 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 LRRC58Q96CX6 371 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 SLC41A3Q96GZ6 507 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 Q96MF0 132 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 OXGR1Q96P68 337 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 BDH2Q9BUT1 245 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 PCDHAC1Q9H158 963 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 MOV10Q9HCE1 1003 aaKnown RBP6.71□□□□□ -1.34
SNHG1-223ENST00000545440 SAR1AQ9NR31 198 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 CISD1Q9NZ45 108 aaKnown RBP6.71□□□□□ -1.34
SNHG1-223ENST00000545440 FN1P02751 2386 aaKnown RBP6.71□□□□□ -1.34
SNHG1-223ENST00000545440 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.7□□□□□ -1.343e-19■■■■■ 78.9
SNHG1-223ENST00000545440 ARPC4-TTLL3A0A0A6YYG9 625 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 A0A1W2PR80 420 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 RPL36A-HNRNPH2H7BZ11 118 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 M0QX08 132 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 M0R1B8 84 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 MRASO14807 208 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 TRAF3IP2O43734 574 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-223ENST00000545440 SLC43A1O75387 559 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 KRT33AO76009 404 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 MT-ATP6P00846 226 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 BGLAPP02818 100 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 NQO1P15559 274 aaKnown RBP6.7□□□□□ -1.34
SNHG1-223ENST00000545440 PI3P19957 117 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 CRYBA2P53672 197 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 CDH12P55289 794 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 CLDN17P56750 224 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 PRPS1P60891 318 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 SRSF2Q01130 221 aaKnown RBP6.7□□□□□ -1.34
SNHG1-223ENST00000545440 SPOCK1Q08629 439 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 KLF10Q13118 480 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 C1DQ13901 141 aaKnown RBP6.7□□□□□ -1.34
SNHG1-223ENST00000545440 VEZF1Q14119 521 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 NPTX1Q15818 432 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 C3orf36Q3SXR2 165 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 TBRG1Q3YBR2 411 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 MMEL1Q495T6 779 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 RABL3Q5HYI8 236 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 C9orf135Q5VTT2 229 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 AGAP6Q5VW22 663 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 MBNL2Q5VZF2 373 aaKnown RBP6.7□□□□□ -1.34
SNHG1-223ENST00000545440 NANOGP8Q6NSW7 305 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 HMBOX1Q6NT76 420 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 ZNF544Q6NX49 715 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 SLC22A25Q6T423 547 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 H1FNTQ75WM6 255 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-223ENST00000545440 SNX32Q86XE0 403 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 CALHM3Q86XJ0 350 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 WDR31Q8NA23 367 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 PCYOX1LQ8NBM8 494 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 OR5AN1Q8NGI8 311 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 OR6T1Q8NGN1 323 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 OR1K1Q8NGR3 316 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 MAGEE2Q8TD90 523 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-223ENST00000545440 ADAMTS16Q8TE57 1224 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 TRMT61AQ96FX7 289 aaKnown RBP6.7□□□□□ -1.34
SNHG1-223ENST00000545440 MCHR1Q99705 422 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 DHRS9Q9BPW9 319 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 WFDC6Q9BQY6 131 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 ZNF426Q9BUY5 554 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 TRAF4Q9BUZ4 470 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-223ENST00000545440 SLC19A3Q9BZV2 496 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 NANOGQ9H9S0 305 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 FKRPQ9H9S5 495 aa6.7□□□□□ -1.34
SNHG1-223ENST00000545440 MRPL39Q9NYK5 338 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms