RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 HOXB9P17482 250 aaPredicted RBP5.85□□□□□ -1.47
LDHA-223ENST00000545215 GPX2P18283 190 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 GATA3P23771 443 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 PRTN3P24158 256 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 ABCD3P28288 659 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 KRT20P35900 424 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 PIGAP37287 484 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 EMDP50402 254 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 NUDT2P50583 147 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 FAM3BP58499 235 aaPredicted RBP5.85□□□□□ -1.47
LDHA-223ENST00000545215 ZNF155Q12901 538 aaPredicted RBP5.85□□□□□ -1.47
LDHA-223ENST00000545215 GAB1Q13480 694 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 RIPK1Q13546 671 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 EBPQ15125 230 aaKnown RBP5.85□□□□□ -1.47
LDHA-223ENST00000545215 TAF9Q16594 264 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 DECR1Q16698 335 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 DNAL1Q4LDG9 190 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 RUNDC3AQ59EK9 446 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 PIGGQ5H8A4 983 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 PAGE3Q5JUK9 113 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 PRAMEF20Q5VT98 475 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 PRAMEF8Q5VWM4 474 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 PRAMEF7Q5VXH5 474 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 SLC22A10Q63ZE4 541 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 CCDC144NLQ6NUI1 221 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 ERICH5Q6P6B1 374 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 C6orf89Q6UWU4 347 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 DLEU7Q6UYE1 221 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 DGAT2L6Q6ZPD8 337 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 Q6ZSN1 163 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 SZRD1Q7Z422 152 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 C6orf120Q7Z4R8 191 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 SERPINA11Q86U17 422 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 PGAM4Q8N0Y7 254 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 DOK4Q8TEW6 326 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 SPACA9Q96E40 222 aaPredicted RBP5.85□□□□□ -1.47
LDHA-223ENST00000545215 BOD1Q96IK1 185 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 SLC35G5Q96KT7 338 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 JSRP1Q96MG2 331 aaPredicted RBP5.85□□□□□ -1.47
LDHA-223ENST00000545215 VSTM2LQ96N03 204 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 NR1H4Q96RI1 486 aaPredicted RBP5.85□□□□□ -1.47
LDHA-223ENST00000545215 GAL3ST4Q96RP7 486 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 SLC6A7Q99884 636 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 PIMREGQ9BSJ6 248 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 THUMPD3Q9BV44 507 aaKnown RBP5.85□□□□□ -1.47
LDHA-223ENST00000545215 CACNG6Q9BXT2 260 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 WWTR1Q9GZV5 400 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 NTN4Q9HB63 628 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 FOLH1BQ9HBA9 442 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 SPAG4Q9NPE6 437 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 IL20Q9NYY1 176 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 PRPF19Q9UMS4 504 aaKnown RBP5.85□□□□□ -1.47
LDHA-223ENST00000545215 BOKQ9UMX3 212 aaPredicted RBP5.85□□□□□ -1.47
LDHA-223ENST00000545215 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 ANKRD65E5RJM6 399 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 FXYD1O00168 92 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 TP53I11O14683 189 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 AIM2O14862 343 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 BCL10O95999 233 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 CLPSP04118 112 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 ATP6V1C1P21283 382 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 MATN1P21941 496 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 MAP3K8P41279 467 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 CDKN2CP42773 168 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 CRATP43155 626 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 EEFSECP57772 596 aaKnown RBP5.84□□□□□ -1.47
LDHA-223ENST00000545215 DSTNP60981 165 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 HPCAP84074 193 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 BNIP1Q12981 228 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 LASP1Q14847 261 aaKnown RBP5.84□□□□□ -1.47
LDHA-223ENST00000545215 EXOSC7Q15024 291 aaKnown RBP5.84□□□□□ -1.47
LDHA-223ENST00000545215 RGNQ15493 299 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 ZSWIM7Q19AV6 140 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 ZNF791Q3KP31 576 aaPredicted RBP5.84□□□□□ -1.47
LDHA-223ENST00000545215 DMRTC1Q5HYR2 192 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 SAMD4BQ5PRF9 694 aaKnown RBP5.84□□□□□ -1.47
LDHA-223ENST00000545215 FAM205BPQ63HN1 556 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 NANOGP8Q6NSW7 305 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 LEG1Q6P5S2 330 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 SHQ1Q6PI26 577 aaKnown RBP5.84□□□□□ -1.47
LDHA-223ENST00000545215 ANGPTL8Q6UXH0 198 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.84□□□□□ -1.47
LDHA-223ENST00000545215 ZNF554Q86TJ5 538 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 C9orf40Q8IXQ3 194 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 POU5F2Q8N7G0 328 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 COX18Q8N8Q8 333 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 SYT8Q8NBV8 401 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 PAQR8Q8TEZ7 354 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 SGCDQ92629 289 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 ADIPOR1Q96A54 375 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 STARD4Q96DR4 205 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 GIMAP5Q96F15 307 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 WDYHV1Q96HA8 205 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 TRNT1Q96Q11 434 aaKnown RBP5.84□□□□□ -1.47
LDHA-223ENST00000545215 ECSITQ9BQ95 431 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 INPP5KQ9BT40 448 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 FAM192AQ9GZU8 254 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 HOXD1Q9GZZ0 328 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 TMEM38AQ9H6F2 299 aa5.84□□□□□ -1.47
LDHA-223ENST00000545215 ZNF703Q9H7S9 590 aaPredicted RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms