RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 NKAIN2Q5VXU1 208 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 DPPA2Q7Z7J5 298 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 SLC22A24Q8N4F4 322 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 ZNF511Q8NB15 262 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 SCARB1Q8WTV0 552 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 DECR2Q9NUI1 292 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 COL1A1P02452 1464 aaPredicted RBP14.27□□□□□ -0.12
CHD4-210ENST00000544040 F6UZH7 168 aa14.27□□□□□ -0.12
CHD4-210ENST00000544040 GNB1P62873 340 aa14.27□□□□□ -0.12
CHD4-210ENST00000544040 TNFRSF17Q02223 184 aa14.27□□□□□ -0.12
CHD4-210ENST00000544040 SLCO5A1Q9H2Y9 848 aa14.27□□□□□ -0.12
CHD4-210ENST00000544040 TAAR2Q9P1P5 351 aa14.27□□□□□ -0.12
CHD4-210ENST00000544040 DUSP13Q9UII6 198 aa14.27□□□□□ -0.12
CHD4-210ENST00000544040 SSUH2Q9Y2M2 353 aa14.27□□□□□ -0.12
CHD4-210ENST00000544040 MYH7P12883 1935 aa14.27□□□□□ -0.12
CHD4-210ENST00000544040 LOC100289279A0A1B0GTE1 492 aa14.27□□□□□ -0.12
CHD4-210ENST00000544040 TRABD2BA6NFA1 517 aa14.27□□□□□ -0.12
CHD4-210ENST00000544040 CBY3A6NI87 242 aa14.27□□□□□ -0.12
CHD4-210ENST00000544040 SRMP19623 302 aa14.27□□□□□ -0.12
CHD4-210ENST00000544040 ELAVL4P26378 380 aaKnown RBP14.27□□□□□ -0.12
CHD4-210ENST00000544040 GLIPR1L1Q6UWM5 242 aa14.27□□□□□ -0.12
CHD4-210ENST00000544040 CATSPERDQ86XM0 798 aa14.27□□□□□ -0.12
CHD4-210ENST00000544040 MFSD9Q8NBP5 474 aa14.27□□□□□ -0.12
CHD4-210ENST00000544040 ZNF296Q8WUU4 475 aaPredicted RBP14.27□□□□□ -0.12
CHD4-210ENST00000544040 SLC6A18Q96N87 628 aa14.27□□□□□ -0.12
CHD4-210ENST00000544040 KLF16Q9BXK1 252 aaPredicted RBP14.27□□□□□ -0.12
CHD4-210ENST00000544040 RNF167Q9H6Y7 350 aa14.27□□□□□ -0.12
CHD4-210ENST00000544040 GPR160Q9UJ42 338 aa14.27□□□□□ -0.12
CHD4-210ENST00000544040 ZNF724A8MTY0 619 aa14.27□□□□□ -0.13
CHD4-210ENST00000544040 M0QZQ0 153 aa14.27□□□□□ -0.13
CHD4-210ENST00000544040 NXNL2Q5VZ03 156 aa14.27□□□□□ -0.13
CHD4-210ENST00000544040 OR13F1Q8NGS4 319 aa14.27□□□□□ -0.13
CHD4-210ENST00000544040 SAGE1Q9NXZ1 904 aa14.27□□□□□ -0.13
CHD4-210ENST00000544040 PTTG3PQ9NZH4 202 aa14.27□□□□□ -0.13
CHD4-210ENST00000544040 CD207Q9UJ71 328 aa14.27□□□□□ -0.13
CHD4-210ENST00000544040 SCML1Q9UN30 329 aa14.27□□□□□ -0.13
CHD4-210ENST00000544040 ZC3H12DA2A288 527 aaKnown RBP14.27□□□□□ -0.13
CHD4-210ENST00000544040 CR2P20023 1033 aa14.27□□□□□ -0.13
CHD4-210ENST00000544040 F2RP25116 425 aa14.27□□□□□ -0.13
CHD4-210ENST00000544040 MEP1BQ16820 701 aa14.27□□□□□ -0.13
CHD4-210ENST00000544040 RHOUQ7L0Q8 258 aa14.27□□□□□ -0.13
CHD4-210ENST00000544040 RETREG3Q86VR2 466 aa14.27□□□□□ -0.13
CHD4-210ENST00000544040 RNF113BQ8IZP6 322 aaKnown RBP14.27□□□□□ -0.13
CHD4-210ENST00000544040 OR5M1Q8NGP8 315 aa14.27□□□□□ -0.13
CHD4-210ENST00000544040 PFN4Q8NHR9 129 aa14.27□□□□□ -0.13
CHD4-210ENST00000544040 UBE2FQ969M7 185 aa14.27□□□□□ -0.13
CHD4-210ENST00000544040 MOKQ9UQ07 419 aa14.27□□□□□ -0.13
CHD4-210ENST00000544040 TMEM184BQ9Y519 407 aaPredicted RBP14.27□□□□□ -0.13
CHD4-210ENST00000544040 SERINC4A6NH21 518 aa14.27□□□□□ -0.13
CHD4-210ENST00000544040 CRYM-AS1A6NIL9 109 aa14.27□□□□□ -0.13
CHD4-210ENST00000544040 DCTN6O00399 190 aa14.27□□□□□ -0.13
CHD4-210ENST00000544040 KDM4DQ6B0I6 523 aa14.27□□□□□ -0.13
CHD4-210ENST00000544040 ZNF425Q6IV72 752 aa14.27□□□□□ -0.13
CHD4-210ENST00000544040 ZNF331Q9NQX6 463 aaPredicted RBP14.27□□□□□ -0.13
CHD4-210ENST00000544040 TM7SF3Q9NS93 570 aa14.27□□□□□ -0.13
CHD4-210ENST00000544040 BOKQ9UMX3 212 aaPredicted RBP14.27□□□□□ -0.13
CHD4-210ENST00000544040 SRPK3Q9UPE1 567 aa14.27□□□□□ -0.13
CHD4-210ENST00000544040 TMED7-TICAM2A0A0A6YYA0 188 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 GALR3O60755 368 aaPredicted RBP14.26□□□□□ -0.13
CHD4-210ENST00000544040 UTS2O95399 124 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 CTSAP10619 480 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 BHLHE23Q8NDY6 225 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 OR51H1Q8NH63 302 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 C12orf49Q9H741 205 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 TMED7Q9Y3B3 224 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 KIR2DS5A0A0G2JLQ3 304 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 A0A0G2JNG1 304 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 KIR2DS3K7RE56 304 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 SOCS7O14512 581 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 LIPAP38571 399 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 HSD17B7P56937 341 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 KIR2DS5Q14953 304 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 RAB35Q15286 201 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 KCNIP2Q9NS61 270 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 GPR55Q9Y2T6 319 aaPredicted RBP14.26□□□□□ -0.13
CHD4-210ENST00000544040 HTR1FP30939 366 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 PIGAP37287 484 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 ZNF239Q16600 458 aaKnown RBP14.26□□□□□ -0.13
CHD4-210ENST00000544040 CD300LGQ6UXG3 332 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 SLC39A5Q6ZMH5 540 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 TMEM102Q8N9M5 508 aaPredicted RBP14.26□□□□□ -0.13
CHD4-210ENST00000544040 DIMT1Q9UNQ2 313 aaKnown RBP14.26□□□□□ -0.13
CHD4-210ENST00000544040 CSAG2Q9Y5P2 127 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 BCAT2O15382 392 aaPredicted RBP14.26□□□□□ -0.13
CHD4-210ENST00000544040 PMS2P2O95744 297 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 ABHD16AO95870 558 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 HCCSP53701 268 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 ACKR1Q16570 336 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 LPCAT3Q6P1A2 487 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 NLRC3Q7RTR2 1065 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 GDF7Q7Z4P5 450 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 TIMM29Q9BSF4 260 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 PBX4Q9BYU1 374 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 DRGXA6NNA5 263 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 GLI4P10075 376 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 HNRNPA1L2Q32P51 320 aaKnown RBP14.26□□□□□ -0.13
CHD4-210ENST00000544040 C4orf17Q53FE4 359 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 PPP1R3BQ86XI6 285 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 CLDN22Q8N7P3 220 aa14.26□□□□□ -0.13
CHD4-210ENST00000544040 OR5K2Q8NHB8 316 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms