RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 PHF3Q92576 2039 aaKnown RBP20.46■□□□□ 0.87
HOMER3-205ENST00000542541 DOCK7Q96N67 2140 aa20.46■□□□□ 0.87
HOMER3-205ENST00000542541 ARHGAP21Q5T5U3 1957 aa20.46■□□□□ 0.87
HOMER3-205ENST00000542541 RELNP78509 3460 aa20.46■□□□□ 0.87
HOMER3-205ENST00000542541 RIIAD1A6NNX1 92 aa20.45■□□□□ 0.87
HOMER3-205ENST00000542541 DLGAP1O14490 977 aa20.45■□□□□ 0.87
HOMER3-205ENST00000542541 TRMUO75648 421 aaKnown RBP20.45■□□□□ 0.87
HOMER3-205ENST00000542541 CD8BP10966 210 aa20.45■□□□□ 0.87
HOMER3-205ENST00000542541 HIST1H1CP16403 213 aaKnown RBP20.45■□□□□ 0.87
HOMER3-205ENST00000542541 CLRN1P58418 232 aa20.45■□□□□ 0.87
HOMER3-205ENST00000542541 CARD17Q5XLA6 110 aa20.45■□□□□ 0.87
HOMER3-205ENST00000542541 MED12LQ86YW9 2145 aa20.45■□□□□ 0.87
HOMER3-205ENST00000542541 DHRSXQ8N5I4 330 aa20.45■□□□□ 0.87
HOMER3-205ENST00000542541 PLEKHA8Q96JA3 519 aa20.45■□□□□ 0.87
HOMER3-205ENST00000542541 HRASLS5Q96KN8 279 aa20.45■□□□□ 0.87
HOMER3-205ENST00000542541 MBOAT4Q96T53 435 aa20.45■□□□□ 0.87
HOMER3-205ENST00000542541 MRPL13Q9BYD1 178 aaKnown RBP20.45■□□□□ 0.87
HOMER3-205ENST00000542541 B3GAT2Q9NPZ5 323 aa20.45■□□□□ 0.87
HOMER3-205ENST00000542541 KRT33AO76009 404 aa20.45■□□□□ 0.86
HOMER3-205ENST00000542541 CNOT4O95628 575 aaKnown RBP20.45■□□□□ 0.86
HOMER3-205ENST00000542541 PGA4P0DJD7 388 aa20.45■□□□□ 0.86
HOMER3-205ENST00000542541 PGA3P0DJD8 388 aa20.45■□□□□ 0.86
HOMER3-205ENST00000542541 BMP5P22003 454 aa20.45■□□□□ 0.86
HOMER3-205ENST00000542541 CHRNB4P30926 498 aa20.45■□□□□ 0.86
HOMER3-205ENST00000542541 CSNK1A1P48729 337 aa20.45■□□□□ 0.86
HOMER3-205ENST00000542541 ITGADQ13349 1161 aa20.45■□□□□ 0.86
HOMER3-205ENST00000542541 MESTQ5EB52 335 aa20.45■□□□□ 0.86
HOMER3-205ENST00000542541 TTC23Q5W5X9 447 aa20.45■□□□□ 0.86
HOMER3-205ENST00000542541 CCDC71Q8IV32 467 aaPredicted RBP20.45■□□□□ 0.86
HOMER3-205ENST00000542541 GPR137CQ8N3F9 429 aa20.45■□□□□ 0.86
HOMER3-205ENST00000542541 OR52E2Q8NGJ4 325 aa20.45■□□□□ 0.86
HOMER3-205ENST00000542541 OR4K13Q8NH42 304 aa20.45■□□□□ 0.86
HOMER3-205ENST00000542541 RBP7Q96R05 134 aa20.45■□□□□ 0.86
HOMER3-205ENST00000542541 SNX18Q96RF0 628 aa20.45■□□□□ 0.86
HOMER3-205ENST00000542541 KCNK17Q96T54 332 aa20.45■□□□□ 0.86
HOMER3-205ENST00000542541 LINC00470Q9BZP3 86 aa20.45■□□□□ 0.86
HOMER3-205ENST00000542541 CMC2Q9NRP2 79 aa20.45■□□□□ 0.86
HOMER3-205ENST00000542541 TVP23BQ9NYZ1 205 aa20.45■□□□□ 0.86
HOMER3-205ENST00000542541 UPB1Q9UBR1 384 aa20.45■□□□□ 0.86
HOMER3-205ENST00000542541 LOC100130705A0A1B0GUX0 176 aa20.44■□□□□ 0.86
HOMER3-205ENST00000542541 PRSS37A4D1T9 235 aa20.44■□□□□ 0.86
HOMER3-205ENST00000542541 SLC16A6O15403 523 aa20.44■□□□□ 0.86
HOMER3-205ENST00000542541 SMNDC1O75940 238 aaKnown RBP eCLIP20.44■□□□□ 0.86
HOMER3-205ENST00000542541 CGAP01215 116 aa20.44■□□□□ 0.86
HOMER3-205ENST00000542541 ZNF3P17036 446 aa20.44■□□□□ 0.86
HOMER3-205ENST00000542541 CDC42P60953 191 aa20.44■□□□□ 0.86
HOMER3-205ENST00000542541 RUNX1T1Q06455 604 aa20.44■□□□□ 0.86
HOMER3-205ENST00000542541 SNAPC1Q16533 368 aa20.44■□□□□ 0.86
HOMER3-205ENST00000542541 C20orf196Q8IYI0 205 aa20.44■□□□□ 0.86
HOMER3-205ENST00000542541 UBE2J2Q8N2K1 259 aa20.44■□□□□ 0.86
HOMER3-205ENST00000542541 NOXO1Q8NFA2 376 aa20.44■□□□□ 0.86
HOMER3-205ENST00000542541 HDAC2Q92769 488 aaKnown RBP20.44■□□□□ 0.86
HOMER3-205ENST00000542541 GLTPQ9NZD2 209 aa20.44■□□□□ 0.86
HOMER3-205ENST00000542541 GMPPBQ9Y5P6 360 aa20.44■□□□□ 0.86
HOMER3-205ENST00000542541 MSTNO14793 375 aa20.43■□□□□ 0.86
HOMER3-205ENST00000542541 RENP00797 406 aa20.43■□□□□ 0.86
HOMER3-205ENST00000542541 HSPA13P48723 471 aa20.43■□□□□ 0.86
HOMER3-205ENST00000542541 ADORA2A-AS1P86434 159 aa20.43■□□□□ 0.86
HOMER3-205ENST00000542541 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.43■□□□□ 0.86
HOMER3-205ENST00000542541 THEM4Q5T1C6 240 aa20.43■□□□□ 0.86
HOMER3-205ENST00000542541 FBXW9Q5XUX1 488 aa20.43■□□□□ 0.86
HOMER3-205ENST00000542541 C12orf73Q69YU5 71 aa20.43■□□□□ 0.86
HOMER3-205ENST00000542541 IZUMO2Q6UXV1 221 aa20.43■□□□□ 0.86
HOMER3-205ENST00000542541 TFAP2EQ6VUC0 442 aa20.43■□□□□ 0.86
HOMER3-205ENST00000542541 ABHD12BQ7Z5M8 362 aaPredicted RBP20.43■□□□□ 0.86
HOMER3-205ENST00000542541 SYT14Q8NB59 555 aa20.43■□□□□ 0.86
HOMER3-205ENST00000542541 CYGBQ8WWM9 190 aa20.43■□□□□ 0.86
HOMER3-205ENST00000542541 FOXD3Q9UJU5 478 aaPredicted RBP20.43■□□□□ 0.86
HOMER3-205ENST00000542541 NDRG4Q9ULP0 352 aaKnown RBP20.43■□□□□ 0.86
HOMER3-205ENST00000542541 H0YAE9 185 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 SURF4O15260 269 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 GGT2P36268 569 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 CDKN2AP42771 156 aaKnown RBP20.42■□□□□ 0.86
HOMER3-205ENST00000542541 AQP4P55087 323 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 CD47Q08722 323 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 KEAP1Q14145 624 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 HIST3H3Q16695 136 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 ZNF362Q5T0B9 420 aaPredicted RBP20.42■□□□□ 0.86
HOMER3-205ENST00000542541 TSPO2Q5TGU0 170 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 LEG1Q6P5S2 330 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.42■□□□□ 0.86
HOMER3-205ENST00000542541 TMEM54Q969K7 222 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 NMNAT3Q96T66 252 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 ADI1Q9BV57 179 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 SLC7A10Q9NS82 523 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 MYO7BQ6PIF6 2116 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 SLC22A23A1A5C7 686 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 E9PQ18 207 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 M0R3G1 203 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 PAICSP22234 425 aaKnown RBP20.42■□□□□ 0.86
HOMER3-205ENST00000542541 BEND4Q6ZU67 534 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 PTCHD4Q6ZW05 846 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 MRGPRGQ86SM5 289 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 WDFY1Q8IWB7 410 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 ZNF610Q8N9Z0 462 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 SDR9C7Q8NEX9 313 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 PITX2Q99697 317 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 ASB6Q9NWX5 421 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 IMPAD1Q9NX62 359 aa20.42■□□□□ 0.86
HOMER3-205ENST00000542541 VSX1Q9NZR4 365 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms