RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 PTGER3P43115 390 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 GPR4P46093 362 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 CEBPDP49716 269 aaPredicted RBP2.7□□□□□ -1.98
USP28-210ENST00000542033 AKR1D1P51857 326 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 NAPAP54920 295 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 CLDN8P56748 225 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 AP3S2P59780 193 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 SNAP25P60880 206 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 NUTF2P61970 127 aaKnown RBP2.7□□□□□ -1.98
USP28-210ENST00000542033 TNNC1P63316 161 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 PSPHP78330 225 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 CSNK1G2P78368 415 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 MS4A2Q01362 244 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 DHODHQ02127 395 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 CD300CQ08708 224 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 ILKQ13418 452 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 TFDP2Q14188 446 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 PIGHQ14442 188 aaPredicted RBP2.7□□□□□ -1.98
USP28-210ENST00000542033 TRIP10Q15642 601 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 TRIP13Q15645 432 aaPredicted RBP2.7□□□□□ -1.98
USP28-210ENST00000542033 ZSWIM7Q19AV6 140 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 KNOP1Q1ED39 458 aaKnown RBP2.7□□□□□ -1.98
USP28-210ENST00000542033 SLC5A12Q1EHB4 618 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 MICBQ29980 383 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 ZNF181Q2M3W8 571 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 GOLGA7BQ2TAP0 167 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 HKDC1Q2TB90 917 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 HNRNPA1L2Q32P51 320 aaKnown RBP2.7□□□□□ -1.98
USP28-210ENST00000542033 NDUFAF6Q330K2 333 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 ANKRD55Q3KP44 614 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 ZNF528Q3MIS6 628 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 POM121L1PQ3SYA9 428 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 RFTN2Q52LD8 501 aaPredicted RBP2.7□□□□□ -1.98
USP28-210ENST00000542033 ACSBG2Q5FVE4 666 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 SPANXN4Q5MJ08 99 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 PIP5KL1Q5T9C9 394 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 SEL1L2Q5TEA6 688 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 MFSD14CQ5VZR4 134 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 FRMPD2BQ6IN97 320 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 SLC25A25Q6KCM7 469 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 LCLAT1Q6UWP7 414 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 CES3Q6UWW8 571 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 TMIGD1Q6UXZ0 262 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 CENPUQ71F23 418 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 GDPD3Q7L5L3 318 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 PAGE2Q7Z2X7 111 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 MRPL52Q86TS9 123 aaKnown RBP2.7□□□□□ -1.98
USP28-210ENST00000542033 DHFR2Q86XF0 187 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 PHF13Q86YI8 300 aaPredicted RBP2.7□□□□□ -1.98
USP28-210ENST00000542033 DND1Q8IYX4 353 aaKnown RBP2.7□□□□□ -1.98
USP28-210ENST00000542033 STK40Q8N2I9 435 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 ZNF786Q8N393 782 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 PARP8Q8N3A8 854 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 PACRGLQ8N7B6 248 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 SYT14Q8NB59 555 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 ACBD4Q8NC06 268 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 MAPK1IP1LQ8NDC0 245 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 C17orf47Q8NEP4 570 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 OR5M1Q8NGP8 315 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 OR2T34Q8NGX1 318 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 OR6F1Q8NGZ6 308 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 OR4K15Q8NH41 348 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 OR52J3Q8NH60 311 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 NDNFQ8TB73 568 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 ZFAND1Q8TCF1 268 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 GPR148Q8TDV2 347 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 ISOC1Q96CN7 298 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 PAGE5Q96GU1 130 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 DEFB118Q96PH6 123 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 RAB40CQ96S21 281 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 ATOH8Q96SQ7 321 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 PFDN5Q99471 154 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 TEAD3Q99594 435 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 PRRT1Q99946 306 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 TTYH2Q9BSA4 534 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 LRRC61Q9BV99 259 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 RBM24Q9BX46 236 aaKnown RBP2.7□□□□□ -1.98
USP28-210ENST00000542033 ANGPTL4Q9BY76 406 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 NLNQ9BYT8 704 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 TMEM117Q9H0C3 514 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 FNDC4Q9H6D8 234 aaPredicted RBP2.7□□□□□ -1.98
USP28-210ENST00000542033 GPN2Q9H9Y4 310 aaPredicted RBP2.7□□□□□ -1.98
USP28-210ENST00000542033 EFCAB1Q9HAE3 211 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 C3orf14Q9HBI5 128 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 MRPL47Q9HD33 250 aaKnown RBP2.7□□□□□ -1.98
USP28-210ENST00000542033 UBE2TQ9NPD8 197 aaPredicted RBP2.7□□□□□ -1.98
USP28-210ENST00000542033 MCUBQ9NWR8 336 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 MIOXQ9UGB7 285 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 ADAM28Q9UKQ2 775 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 RPH3ALQ9UNE2 315 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 FOXJ3Q9UPW0 622 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 BAIAP2Q9UQB8 552 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 KCNIP3Q9Y2W7 256 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 WIPI2Q9Y4P8 454 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 POLR3HQ9Y535 204 aaPredicted RBP2.7□□□□□ -1.98
USP28-210ENST00000542033 ALG5Q9Y673 324 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 NAV1Q8NEY1 1877 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 NESP48681 1621 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 CACNA1FO60840 1977 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 LRRIQ1Q96JM4 1722 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms