RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 HOXC12P31275 282 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 GPR4P46093 362 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 OMPP47874 163 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 LIMS1P48059 325 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 CSNK1A1P48729 337 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 FXYD6P3P58550 94 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 ADAM8P78325 824 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 MYBPC1Q00872 1141 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 TRIM25Q14258 630 aaKnown RBP8.48□□□□□ -1.05
YBX3-212ENST00000542002 TMEM108Q6UXF1 575 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 B3GLCTQ6Y288 498 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 TMPRSS11FQ6ZWK6 438 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 ZNF627Q7L945 461 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 ZER1Q7Z7L7 766 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 OAFQ86UD1 273 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 ZNF611Q8N823 705 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 SYT14Q8NB59 555 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 OR6N1Q8NGY5 312 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 HDAC2Q92769 488 aaKnown RBP8.48□□□□□ -1.05
YBX3-212ENST00000542002 MCHR2Q969V1 340 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 ZNF566Q969W8 418 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 NMD3Q96D46 503 aaKnown RBP8.48□□□□□ -1.05
YBX3-212ENST00000542002 FAM46AQ96IP4 442 aaKnown RBP8.48□□□□□ -1.05
YBX3-212ENST00000542002 ADAD1Q96M93 576 aaKnown RBP8.48□□□□□ -1.05
YBX3-212ENST00000542002 ZNF75AQ96N20 296 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 THTPAQ9BU02 230 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 C1orf21Q9H246 121 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 ANKRD19PQ9H560 264 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 INIPQ9NRY2 104 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 CISD1Q9NZ45 108 aaKnown RBP8.48□□□□□ -1.05
YBX3-212ENST00000542002 CRNNQ9UBG3 495 aaPredicted RBP8.48□□□□□ -1.05
YBX3-212ENST00000542002 ZNF346Q9UL40 294 aaKnown RBP8.48□□□□□ -1.05
YBX3-212ENST00000542002 AMDHD2Q9Y303 409 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 FAM32AQ9Y421 112 aaKnown RBP8.48□□□□□ -1.05
YBX3-212ENST00000542002 PRRC2AP48634 2157 aaKnown RBP8.48□□□□□ -1.05
YBX3-212ENST00000542002 A0A1W2PRG6 482 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 SH3PXD2BA1X283 911 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 HTR3EA5X5Y0 456 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 MCIDASD6RGH6 385 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 AKAP8O43823 692 aaKnown RBP8.47□□□□□ -1.05
YBX3-212ENST00000542002 IGLV1-44P01699 117 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 HLA-HP01893 362 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 SAGP10523 405 aaPredicted RBP8.47□□□□□ -1.05
YBX3-212ENST00000542002 B4GALT1P15291 398 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 CBR1P16152 277 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 ACADSP16219 412 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 IFNA8P32881 189 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 SH3BGRP55822 239 aaPredicted RBP8.47□□□□□ -1.05
YBX3-212ENST00000542002 CTXN1P60606 82 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 PIGFQ07326 219 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 ALG10Q5BKT4 473 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 PGM2L1Q6PCE3 622 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 KLHL17Q6TDP4 642 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 KLHL24Q6TFL4 600 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 THSD4Q6ZMP0 1018 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 C20orf204Q6ZNR8 217 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 SSX8Q7RTT4 187 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 PIWIL3Q7Z3Z3 882 aaKnown RBP8.47□□□□□ -1.05
YBX3-212ENST00000542002 MDP1Q86V88 176 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 CYP4Z1Q86W10 505 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 SKA3Q8IX90 412 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 ARHGAP24Q8N264 748 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 WFDC11Q8NEX6 87 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 OR4K5Q8NGD3 323 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 SMAP2Q8WU79 429 aaPredicted RBP8.47□□□□□ -1.05
YBX3-212ENST00000542002 ALPK1Q96QP1 1244 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 TSPAN32Q96QS1 320 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 CCL19Q99731 98 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 ULBP2Q9BZM5 246 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 TXNIPQ9H3M7 391 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 BEX4Q9NWD9 120 aaPredicted RBP8.47□□□□□ -1.05
YBX3-212ENST00000542002 IL20RAQ9UHF4 553 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 MOKQ9UQ07 419 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 LAMP3Q9UQV4 416 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 POFUT2Q9Y2G5 429 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 ADAM18Q9Y3Q7 739 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 MAGED1Q9Y5V3 778 aaPredicted RBP8.47□□□□□ -1.05
YBX3-212ENST00000542002 MYO9AB2RTY4 2548 aa8.47□□□□□ -1.05
YBX3-212ENST00000542002 CCDC168Q8NDH2 2452 aa8.46□□□□□ -1.05
YBX3-212ENST00000542002 NPIPB13A6NJU9 1138 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 NPIPB4C9JG80 1138 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 ATP6V1G2-DDX39BF2Z307 99 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 OVOL3O00110 214 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 IMPA2O14732 288 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 DHHO43323 396 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 SLC2A10O95528 541 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 WNT11O96014 354 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 IGKV3-15P01624 115 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 IGHMP01871 453 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 SCG5P05408 212 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 FABP3P05413 133 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 CECR9P0C854 216 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 CALCRP30988 508 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 RRM2P31350 389 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 MAGEA2P43356 314 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 ZNF133P52736 654 aaPredicted RBP8.46□□□□□ -1.06
YBX3-212ENST00000542002 HMGA2P52926 109 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 UBE2NP61088 152 aaKnown RBP8.46□□□□□ -1.06
YBX3-212ENST00000542002 RPL27P61353 136 aaKnown RBP8.46□□□□□ -1.06
YBX3-212ENST00000542002 ERVK-25P63136 954 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms