RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 GATSQ8NAP1 163 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 DEFB124Q8NES8 71 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 YIPF5Q969M3 257 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 RAB11FIP5Q9BXF6 653 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 C20orf85Q9H1P6 137 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 ESRP2Q9H6T0 727 aaKnown RBP13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 TMEM27Q9HBJ8 222 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 RPS6KB2Q9UBS0 482 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 EXOGQ9Y2C4 368 aaKnown RBP13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 ADAM18Q9Y3Q7 739 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 NUBP2Q9Y5Y2 271 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 C2orf74A8MZ97 194 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 LINC00587B1AMM8 73 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 DNASE2O00115 360 aaPredicted RBP13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 TO15178 435 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 RCBTB2O95199 551 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 NFYAP23511 347 aaPredicted RBP13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 TMEM44Q2T9K0 475 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 METAP1DQ6UB28 335 aaPredicted RBP13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 OR14A2Q96R54 314 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 PRSS27Q9BQR3 290 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 PITHD1Q9GZP4 211 aaPredicted RBP13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 LDAHQ9H6V9 325 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 TRBV23-1A0A0A0MS06 115 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 IDSB3KWA1 339 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 OR10H2O60403 315 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 CER1O95813 267 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 SBK2P0C263 348 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 ZNF3P17036 446 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 MTNR1BP49286 362 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 OTPQ5XKR4 325 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 TMEM52Q8NDY8 209 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 OR4N2Q8NGD1 307 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 SLC22A11Q9NSA0 550 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 TMEM184BQ9Y519 407 aaPredicted RBP13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 ACOD1A6NK06 481 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 OR5K4A6NMS3 321 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 PTP4A3O75365 173 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 CCL4P13236 92 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 RAB3AP20336 220 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 ADH7P40394 386 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 CCR4P51679 360 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 TNFRSF17Q02223 184 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 FAM209BQ5JX69 171 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 ZNF425Q6IV72 752 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 RNF44Q7L0R7 432 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 MRGPREQ86SM8 312 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 CBLN2Q8IUK8 224 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 NANPQ8TBE9 248 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 SLC25A28Q96A46 364 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 DERL3Q96Q80 235 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 OR2A5Q96R48 311 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 OCIAD1Q9NX40 245 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 ZNF346Q9UL40 294 aaKnown RBP13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 SLC22A31A6NKX4 558 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 NUDT21O43809 227 aaKnown RBP13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 ACHEP22303 614 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 EDNRAP25101 427 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 C2orf68Q2NKX9 166 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 EIPR1Q53HC9 387 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 CLRN3Q8NCR9 226 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 OR5M1Q8NGP8 315 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 OR51Q1Q8NH59 317 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 GAL3ST3Q96A11 431 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 MEPEQ9NQ76 525 aaPredicted RBP13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 EDARQ9UNE0 448 aa13.04□□□□□ -0.32
SFSWAP-210ENST00000541286 TRBV2A0A0J9YWF9 115 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 BHLHE40O14503 412 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 CT62P0C5K7 136 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 ATF1P18846 271 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 NDUFS1P28331 727 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 HLXQ14774 488 aaPredicted RBP13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 SLC16A13Q7RTY0 426 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 ZNF619Q8N2I2 560 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 BVESQ8NE79 360 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 ACOT12Q8WYK0 555 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 RERGQ96A58 199 aaPredicted RBP13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 CMSS1Q9BQ75 279 aaKnown RBP13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 MED17Q9NVC6 651 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 ZMIZ1Q9ULJ6 1067 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 IER3IP1Q9Y5U9 82 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 GDNFP39905 211 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 SOX2P48431 317 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 KCNJ3P48549 501 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 RBMS2Q15434 407 aaKnown RBP13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 NR0B2Q15466 257 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 ALG10BQ5I7T1 473 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 APOOLQ6UXV4 268 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 OR9A4Q8NGU2 314 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 ADAMTS14Q8WXS8 1223 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 FBXO17Q96EF6 278 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 C10orf90Q96M02 699 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 TAS2R3Q9NYW6 316 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 DAPP1Q9UN19 280 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 PRELID3BQ9Y3B1 194 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 SDK2Q58EX2 2172 aa13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 A0A0A6YYC8 382 aaPredicted RBP13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 I3L1I5 382 aaPredicted RBP13.03□□□□□ -0.32
SFSWAP-210ENST00000541286 GPR31O00270 319 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms