RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 SULT2B1O00204 365 aa13.81□□□□□ -0.2
SMARCA4-207ENST00000541122 P04436 131 aa13.81□□□□□ -0.2
SMARCA4-207ENST00000541122 NAT1P18440 290 aa13.81□□□□□ -0.2
SMARCA4-207ENST00000541122 BCKDHBP21953 392 aa13.81□□□□□ -0.2
SMARCA4-207ENST00000541122 ACSM5Q6NUN0 579 aa13.81□□□□□ -0.2
SMARCA4-207ENST00000541122 FAM199XQ6PEV8 388 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-207ENST00000541122 KIAA0907Q7Z7F0 614 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-207ENST00000541122 BAP18Q8IXM2 172 aa13.81□□□□□ -0.2
SMARCA4-207ENST00000541122 SMIM4Q8WVI0 70 aa13.81□□□□□ -0.2
SMARCA4-207ENST00000541122 ZNF768Q9H5H4 540 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-207ENST00000541122 A0A0A6YYC8 382 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 I3L1I5 382 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 BCL2L11O43521 198 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 GALR3O60755 368 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 ACHEP22303 614 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 BLVRBP30043 206 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 TAF9Q16594 264 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 PDLIM3Q53GG5 364 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 PAQR6Q6TCH4 344 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 ZNF836Q6ZNA1 936 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 OR1S2Q8NGQ3 325 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 MACROD1Q9BQ69 325 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 STRCQ7RTU9 1775 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 UMAD1C9J7I0 102 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 F10P00742 488 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 THBS1P07996 1170 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 PRPH2P23942 346 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 POU3F1Q03052 451 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 CAMK2BQ13554 666 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 RBM39Q14498 530 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 DEFB110Q30KQ9 67 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 TMEM99Q8N816 258 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 OR9K2Q8NGE7 335 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 OR13C8Q8NGS7 320 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 SDSLQ96GA7 329 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 CUTCQ9NTM9 273 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 A0A087WUU8 490 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 TCRBV21S2A2A0A5A6 115 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 ARGFXA6NJG6 315 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 CEBPZOSA8MTT3 80 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 ZNF93P35789 620 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 PSMB3P49720 205 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 PMPCAQ10713 525 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 CATR1Q13166 79 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 C1orf61Q13536 156 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 ZNF239Q16600 458 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 PLCXD3Q63HM9 321 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 ANKRD34AQ69YU3 496 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 MISPQ8IVT2 679 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 CAPNS2Q96L46 248 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 ADOQ96SZ5 270 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 STACQ99469 402 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 ADAM19Q9H013 955 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 C12orf10Q9HB07 376 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 KCNIP2Q9NS61 270 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 B3GALT5Q9Y2C3 310 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 LRP5LA4QPB2 252 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 LGALS8O00214 317 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 LILRB3O75022 631 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 ACSM4P0C7M7 580 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 SLC6A12P48065 614 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 LTB4R2Q9NPC1 389 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 HINT3Q9NQE9 182 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 GNG13Q9P2W3 67 aa13.8□□□□□ -0.2
SMARCA4-207ENST00000541122 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 ZNF587BE7ETH6 402 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 TNFSF12O43508 249 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 PMP2P02689 132 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 CTSAP10619 480 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 GALP22466 123 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 F2RL1P55085 397 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 CST9LP1Q5W188 147 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 DLK2Q6UY11 383 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 SLC35D2Q76EJ3 337 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 NAXDQ8IW45 347 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 LSMEM1Q8N8F7 131 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 VN1R3Q9BXE9 311 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 RNF32Q9H0A6 362 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 RARRES3Q9UL19 164 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 SOD1P00441 154 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 KITLGP21583 273 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 MEP1BQ16820 701 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 FAM57BQ71RH2 274 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 FAM71CQ8NEG0 241 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 SHDQ96IW2 340 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 SLC6A18Q96N87 628 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 LYSMD1Q96S90 227 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 SPACA1Q9HBV2 294 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 NECAP2Q9NVZ3 263 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 OR52A1Q9UKL2 312 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 MAST2Q6P0Q8 1798 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 MYO10Q9HD67 2058 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 TRAV1-2A0A0B4J238 106 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 PPP5D1E7EU14 171 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 OR13C7P0DN81 318 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 NPPBP16860 134 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 CD80P33681 288 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 SFTPDP35247 375 aa13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 ATPAF1Q5TC12 328 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-207ENST00000541122 KIAA0895LQ68EN5 471 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms