RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 LRBAP50851 2863 aa8.07□□□□□ -1.12
SNHG1-215ENST00000540904 ARPC4-TTLL3A0A0A6YYG9 625 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 TCRBV5S2A0A599 114 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 SHISA9B4DS77 424 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 TRMUO75648 421 aaKnown RBP8.06□□□□□ -1.12
SNHG1-215ENST00000540904 STAMBPO95630 424 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 QDPRP09417 244 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 PGA4P0DJD7 388 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 PGA3P0DJD8 388 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 B4GALT1P15291 398 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 RRM2P31350 389 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 RPL4P36578 427 aaKnown RBP8.06□□□□□ -1.12
SNHG1-215ENST00000540904 SLC9A3P48764 834 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 CTXN1P60606 82 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 RPS4XP62701 263 aaKnown RBP8.06□□□□□ -1.12
SNHG1-215ENST00000540904 MYBPC1Q00872 1141 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 SEC23BQ15437 767 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 DEFB113Q30KQ7 82 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 ZNF672Q499Z4 452 aaPredicted RBP8.06□□□□□ -1.12
SNHG1-215ENST00000540904 DNAL1Q4LDG9 190 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 MTX3Q5HYI7 312 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 ARMC4Q5T2S8 1044 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 C1QTNF12Q5T7M4 302 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 LCN8Q6JVE9 175 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 LRFN4Q6PJG9 635 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 ZNF813Q6ZN06 617 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 TMPRSS11FQ6ZWK6 438 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 HDDC2Q7Z4H3 204 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 MAGEE2Q8TD90 523 aaPredicted RBP8.06□□□□□ -1.12
SNHG1-215ENST00000540904 ASB10Q8WXI3 467 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 TMEM54Q969K7 222 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 FBXW5Q969U6 566 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 SLC7A6OSQ96CW6 309 aaPredicted RBP8.06□□□□□ -1.12
SNHG1-215ENST00000540904 MBD6Q96DN6 1003 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 ASB9Q96DX5 294 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 RADILQ96JH8 1075 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 DHRS1Q96LJ7 313 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 LRGUKQ96M69 825 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 ZNF347Q96SE7 839 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 FOXB1Q99853 325 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 TXNIPQ9H3M7 391 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 KRCC1Q9NPI7 259 aaPredicted RBP8.06□□□□□ -1.12
SNHG1-215ENST00000540904 POU2F3Q9UKI9 436 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 MGAT4BQ9UQ53 548 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 TACC2O95359 2948 aa8.06□□□□□ -1.12
SNHG1-215ENST00000540904 ABCA4P78363 2273 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 IGHV1-18A0A0C4DH31 117 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 SH3PXD2BA1X283 911 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 NPIPB13A6NJU9 1138 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 NPIPB4C9JG80 1138 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 HLA-HP01893 362 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 CD79AP11912 226 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 ACADSP16219 412 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 OMPP47874 163 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 LIMS1P48059 325 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 CDH11P55287 796 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 RPL27P61353 136 aaKnown RBP8.05□□□□□ -1.12
SNHG1-215ENST00000540904 PIGFQ07326 219 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 CD47Q08722 323 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 NPRL3Q12980 569 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 FHL1Q13642 323 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 TESK1Q15569 626 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 ANKDD1AQ495B1 522 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 ZBED5Q49AG3 693 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 FAM98BQ52LJ0 330 aaKnown RBP8.05□□□□□ -1.12
SNHG1-215ENST00000540904 DEPDC4Q8N2C3 294 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 ZNF611Q8N823 705 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 LRRC75AQ8NAA5 344 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 NOXO1Q8NFA2 376 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 HDAC2Q92769 488 aaKnown RBP8.05□□□□□ -1.12
SNHG1-215ENST00000540904 PIGTQ969N2 578 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 MCHR2Q969V1 340 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 SLC38A2Q96QD8 506 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 ALPK1Q96QP1 1244 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 FOXC2Q99958 501 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 BTBD10Q9BSF8 475 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 FUZQ9BT04 418 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 KATNB1Q9BVA0 655 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 MRPL13Q9BYD1 178 aaKnown RBP8.05□□□□□ -1.12
SNHG1-215ENST00000540904 BEX4Q9NWD9 120 aaPredicted RBP8.05□□□□□ -1.12
SNHG1-215ENST00000540904 CISD1Q9NZ45 108 aaKnown RBP8.05□□□□□ -1.12
SNHG1-215ENST00000540904 STX18Q9P2W9 335 aaKnown RBP8.05□□□□□ -1.12
SNHG1-215ENST00000540904 ZNF346Q9UL40 294 aaKnown RBP8.05□□□□□ -1.12
SNHG1-215ENST00000540904 MOKQ9UQ07 419 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 AURKCQ9UQB9 309 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 LAMP3Q9UQV4 416 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 SPG11Q96JI7 2443 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 CSMD1Q96PZ7 3565 aa8.05□□□□□ -1.12
SNHG1-215ENST00000540904 CREBBPQ92793 2442 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 ZNF503-AS2A6NEH8 195 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 UNC119BA6NIH7 251 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 ATP6V1G2-DDX39BF2Z307 99 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 ACOT8O14734 319 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 DHHO43323 396 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 OR10H3O60404 316 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 SMPD2O60906 423 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 DNAJC8O75937 253 aaPredicted RBP8.04□□□□□ -1.12
SNHG1-215ENST00000540904 SLC2A10O95528 541 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 IGHMP01871 453 aa8.04□□□□□ -1.12
SNHG1-215ENST00000540904 SOD3P08294 240 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms