RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 ZNF208O43345 1280 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 FAM20BO75063 409 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 ERLIN1O75477 346 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 UPK3AO75631 287 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 KRT34O76011 436 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 RSL1D1O76021 490 aaKnown RBP3.88□□□□□ -1.79
SNHG1-214ENST00000540865 ZNF432O94892 652 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 VAMP5O95183 116 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 GPANK1O95872 356 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 IGHMP01871 453 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 PRB2P02812 416 aaPredicted RBP3.88□□□□□ -1.79
SNHG1-214ENST00000540865 SBK3P0C264 359 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 UBTFL6P0CB48 400 aaPredicted RBP3.88□□□□□ -1.79
SNHG1-214ENST00000540865 PPIAL4GP0DN37 164 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 BCKDHAP12694 445 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 ZNF35P13682 527 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 SLC6A2P23975 617 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 MAGEB1P43366 347 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 PKNOX1P55347 436 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 PROK1P58294 105 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 SELENOVP59797 346 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 RPL15P61313 204 aaKnown RBP3.88□□□□□ -1.79
SNHG1-214ENST00000540865 ARF1P84077 181 aaKnown RBP3.88□□□□□ -1.79
SNHG1-214ENST00000540865 ROR2Q01974 943 aaKnown RBP3.88□□□□□ -1.79
SNHG1-214ENST00000540865 NPRL3Q12980 569 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 ZNF154Q13106 437 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 FAM189A2Q15884 450 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 IMPG1Q17R60 797 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 C2orf68Q2NKX9 166 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 TRMT5Q32P41 509 aaKnown RBP3.88□□□□□ -1.79
SNHG1-214ENST00000540865 GLIPR1L2Q4G1C9 344 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 UNC50Q53HI1 259 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 ZNF678Q5SXM1 525 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 PDZK1Q5T2W1 519 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 GKAP1Q5VSY0 366 aaPredicted RBP3.88□□□□□ -1.79
SNHG1-214ENST00000540865 AP1ARQ63HQ0 302 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 RUSC1-AS1Q66K80 236 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 ANKRD26P1Q6NSI1 321 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 ZNF529Q6P280 563 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 TMEM154Q6P9G4 183 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 LINGO2Q7L985 606 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 R3HCC1LQ7Z5L2 792 aaKnown RBP3.88□□□□□ -1.79
SNHG1-214ENST00000540865 MDP1Q86V88 176 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 LRP11Q86VZ4 500 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 TMEM86BQ8N661 226 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 FAM71CQ8NEG0 241 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 ZNF563Q8TA94 476 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 ST7LQ8TDW4 575 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 PPCDCQ96CD2 204 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 DNAJA3Q96EY1 480 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 EGLN2Q96KS0 407 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 ALKBH3Q96Q83 286 aaPredicted RBP3.88□□□□□ -1.79
SNHG1-214ENST00000540865 SDF2Q99470 211 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 GAL3ST1Q99999 423 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 TRIM31Q9BZY9 425 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 DENND2DQ9H6A0 471 aaPredicted RBP3.88□□□□□ -1.79
SNHG1-214ENST00000540865 REEP4Q9H6H4 257 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 EXOSC3Q9NQT5 275 aaKnown RBP3.88□□□□□ -1.79
SNHG1-214ENST00000540865 SIRT3Q9NTG7 399 aaPredicted RBP3.88□□□□□ -1.79
SNHG1-214ENST00000540865 ZCCHC3Q9NUD5 404 aaKnown RBP3.88□□□□□ -1.79
SNHG1-214ENST00000540865 B3GNT2Q9NY97 397 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 MYEF2Q9P2K5 600 aaKnown RBP3.88□□□□□ -1.79
SNHG1-214ENST00000540865 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.88□□□□□ -1.79
SNHG1-214ENST00000540865 KCNE5Q9UJ90 142 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 FAF1Q9UNN5 650 aaPredicted RBP3.88□□□□□ -1.79
SNHG1-214ENST00000540865 SLC35A3Q9Y2D2 325 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 SNX24Q9Y343 169 aa3.88□□□□□ -1.79
SNHG1-214ENST00000540865 POLR3HQ9Y535 204 aaPredicted RBP3.88□□□□□ -1.79
SNHG1-214ENST00000540865 TMED7-TICAM2A0A0A6YYA0 188 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 TMEM72A0PK05 275 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 KRTAP23-1A1A580 65 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 SLC22A23A1A5C7 686 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 LIPT2A6NK58 231 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 SRRM5B3KS81 715 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 TRAPPC2LH3BP13 241 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 UGT2B17O75795 530 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 SUPT7LO94864 414 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 AKR7A3O95154 331 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 AK1P00568 194 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 OPN1MWP04001 364 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 GPIP06744 558 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 GUSBP08236 651 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 CSF1P09603 554 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 MYZAPP0CAP1 466 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 OPN1MW2P0DN77 364 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 OPN1MW3P0DN78 364 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 IGHV4-38-2P0DP08 117 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 ZNF14P17017 642 aaPredicted RBP3.87□□□□□ -1.79
SNHG1-214ENST00000540865 TNFRSF1AP19438 455 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 CCNA2P20248 432 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 PGM1P36871 562 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 MAGEA12P43365 314 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 CCT3P49368 545 aaKnown RBP3.87□□□□□ -1.79
SNHG1-214ENST00000540865 P2RY4P51582 365 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 POLR2HP52434 150 aaKnown RBP3.87□□□□□ -1.79
SNHG1-214ENST00000540865 CLRN1P58418 232 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 CCL8P80075 99 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 GALK2Q01415 458 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 NHLH2Q02577 135 aa3.87□□□□□ -1.79
SNHG1-214ENST00000540865 PAX8Q06710 450 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms