RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 KCTD21Q4G0X4 260 aa1.75□□□□□ -2.13
MDM2-227ENST00000540709 SFT2D3Q587I9 215 aa1.75□□□□□ -2.13
MDM2-227ENST00000540709 ABHD13Q7L211 337 aa1.75□□□□□ -2.13
MDM2-227ENST00000540709 STRADAQ7RTN6 431 aa1.75□□□□□ -2.13
MDM2-227ENST00000540709 BHLHA15Q7RTS1 189 aaPredicted RBP1.75□□□□□ -2.13
MDM2-227ENST00000540709 TRPV1Q8NER1 839 aa1.75□□□□□ -2.13
MDM2-227ENST00000540709 ZNF461Q8TAF7 563 aa1.75□□□□□ -2.13
MDM2-227ENST00000540709 MAGEE2Q8TD90 523 aaPredicted RBP1.75□□□□□ -2.13
MDM2-227ENST00000540709 EMG1Q92979 244 aaKnown RBP1.75□□□□□ -2.13
MDM2-227ENST00000540709 STMN2Q93045 179 aa1.75□□□□□ -2.13
MDM2-227ENST00000540709 SECISBP2Q96T21 854 aaKnown RBP1.75□□□□□ -2.13
MDM2-227ENST00000540709 SH3GL3Q99963 347 aa1.75□□□□□ -2.13
MDM2-227ENST00000540709 RPP21Q9H633 154 aaKnown RBP1.75□□□□□ -2.13
MDM2-227ENST00000540709 YY1AP1Q9H869 796 aa1.75□□□□□ -2.13
MDM2-227ENST00000540709 SH3BGRL2Q9UJC5 107 aa1.75□□□□□ -2.13
MDM2-227ENST00000540709 GGA2Q9UJY4 613 aa1.75□□□□□ -2.13
MDM2-227ENST00000540709 TMEM14AQ9Y6G1 99 aa1.75□□□□□ -2.13
MDM2-227ENST00000540709 AP1M2Q9Y6Q5 423 aa1.75□□□□□ -2.13
MDM2-227ENST00000540709 DHX57Q6P158 1386 aaKnown RBP1.74□□□□□ -2.13
MDM2-227ENST00000540709 MN1Q10571 1320 aaPredicted RBP1.74□□□□□ -2.13
MDM2-227ENST00000540709 A0A0B4J2A0 478 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 PCP4L1A6NKN8 68 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 K7EQM0 130 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 FGF1P05230 155 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 OPRD1P41143 372 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 CD86P42081 329 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 DUSP3P51452 185 aaPredicted RBP1.74□□□□□ -2.13
MDM2-227ENST00000540709 CCR8P51685 355 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 BPIFB3P59826 476 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 POLR2FP61218 127 aaKnown RBP1.74□□□□□ -2.13
MDM2-227ENST00000540709 RAP1AP62834 184 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 SCRN3Q0VDG4 424 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 ERCC8Q13216 396 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 CCDC92Q53HC0 331 aaPredicted RBP1.74□□□□□ -2.13
MDM2-227ENST00000540709 HES5Q5TA89 166 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 OR4F3Q6IEY1 312 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 Q6ZPB1 254 aaPredicted RBP1.74□□□□□ -2.13
MDM2-227ENST00000540709 TMEM179Q6ZVK1 233 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 TMEM135Q86UB9 458 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 MFSD9Q8NBP5 474 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 SYAP1Q96A49 352 aaPredicted RBP1.74□□□□□ -2.13
MDM2-227ENST00000540709 RBMXL1Q96E39 390 aaKnown RBP1.74□□□□□ -2.13
MDM2-227ENST00000540709 PDXPQ96GD0 296 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 ZNF607Q96SK3 696 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 FOXC2Q99958 501 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 OSBPL11Q9BXB4 747 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 GABARAPL3Q9BY60 117 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 PARD6BQ9BYG5 372 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 MFFQ9GZY8 342 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 RMND5AQ9H871 391 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 RAB18Q9NP72 206 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 ADAP2Q9NPF8 381 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 SMOXQ9NWM0 555 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 SHPKQ9UHJ6 478 aa1.74□□□□□ -2.13
MDM2-227ENST00000540709 MSH6P52701 1360 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 CENPJQ9HC77 1338 aaPredicted RBP1.73□□□□□ -2.13
MDM2-227ENST00000540709 RPL36A-HNRNPH2H7BZ11 118 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 DYNC1I1O14576 645 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 MAGEB3O15480 346 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 CBR3O75828 277 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 ERLIN2O94905 339 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 CLDN9O95484 217 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 PTMAP06454 111 aaKnown RBP1.73□□□□□ -2.13
MDM2-227ENST00000540709 AK4P27144 223 aaPredicted RBP1.73□□□□□ -2.13
MDM2-227ENST00000540709 FDFT1P37268 417 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 KRTAP12-3P60328 96 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 RPS21P63220 83 aaKnown RBP1.73□□□□□ -2.13
MDM2-227ENST00000540709 SLC7A9P82251 487 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 FGL1Q08830 312 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 ELP6Q0PNE2 266 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 GINS1Q14691 196 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 DGUOKQ16854 277 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 EXOC3L2Q2M3D2 409 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 DNLZQ5SXM8 178 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 BIVMQ86UB2 503 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 CEP112Q8N8E3 955 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 OR2T34Q8NGX1 318 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 SGK3Q96BR1 496 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 DTNBP1Q96EV8 351 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 HSFY1Q96LI6 401 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 SLC38A2Q96QD8 506 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 SORT1Q99523 831 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 COPS8Q99627 209 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 PLA2G12AQ9BZM1 189 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 RAB33BQ9H082 229 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 PARP12Q9H0J9 701 aaKnown RBP1.73□□□□□ -2.13
MDM2-227ENST00000540709 AZI2Q9H6S1 392 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 NIPAL2Q9H841 368 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 LIN28AQ9H9Z2 209 aaKnown RBP1.73□□□□□ -2.13
MDM2-227ENST00000540709 HMG20AQ9NP66 347 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 ISYNA1Q9NPH2 558 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 ZNF355PQ9NSJ1 428 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 ZNRD1Q9P1U0 126 aa1.73□□□□□ -2.13
MDM2-227ENST00000540709 F11RQ9Y624 299 aaKnown RBP1.73□□□□□ -2.13
MDM2-227ENST00000540709 IGKV3D-11A0A0A0MRZ8 115 aa1.72□□□□□ -2.13
MDM2-227ENST00000540709 A0A1B0GVI7 797 aa1.72□□□□□ -2.13
MDM2-227ENST00000540709 CIB4A0PJX0 185 aa1.72□□□□□ -2.13
MDM2-227ENST00000540709 ZNF705GA8MUZ8 300 aaPredicted RBP1.72□□□□□ -2.13
MDM2-227ENST00000540709 H0YHG0 523 aa1.72□□□□□ -2.13
MDM2-227ENST00000540709 KMOO15229 486 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms