RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 B3GAT2Q9NPZ5 323 aa15.96■□□□□ 0.15
SNRPA1-203ENST00000540017 IGHV1-18A0A0C4DH31 117 aa15.95■□□□□ 0.14
SNRPA1-203ENST00000540017 SOD3P08294 240 aa15.95■□□□□ 0.14
SNRPA1-203ENST00000540017 DANCRP0C864 163 aa15.95■□□□□ 0.14
SNRPA1-203ENST00000540017 CDH11P55287 796 aa15.95■□□□□ 0.14
SNRPA1-203ENST00000540017 UBE2NP61088 152 aaKnown RBP15.95■□□□□ 0.14
SNRPA1-203ENST00000540017 TRIM25Q14258 630 aaKnown RBP15.95■□□□□ 0.14
SNRPA1-203ENST00000540017 HIST3H3Q16695 136 aa15.95■□□□□ 0.14
SNRPA1-203ENST00000540017 PGGHGQ32M88 737 aa15.95■□□□□ 0.14
SNRPA1-203ENST00000540017 ALG10Q5BKT4 473 aa15.95■□□□□ 0.14
SNRPA1-203ENST00000540017 C1QTNF12Q5T7M4 302 aa15.95■□□□□ 0.14
SNRPA1-203ENST00000540017 ZNF627Q7L945 461 aa15.95■□□□□ 0.14
SNRPA1-203ENST00000540017 OAFQ86UD1 273 aa15.95■□□□□ 0.14
SNRPA1-203ENST00000540017 MYPOPQ86VE0 399 aaPredicted RBP15.95■□□□□ 0.14
SNRPA1-203ENST00000540017 PIGTQ969N2 578 aa15.95■□□□□ 0.14
SNRPA1-203ENST00000540017 FBXW5Q969U6 566 aa15.95■□□□□ 0.14
SNRPA1-203ENST00000540017 FAM46AQ96IP4 442 aaKnown RBP15.95■□□□□ 0.14
SNRPA1-203ENST00000540017 ZNF347Q96SE7 839 aa15.95■□□□□ 0.14
SNRPA1-203ENST00000540017 SEPHS2Q99611 448 aa15.95■□□□□ 0.14
SNRPA1-203ENST00000540017 SEC61A2Q9H9S3 476 aa15.95■□□□□ 0.14
SNRPA1-203ENST00000540017 IL1RAPQ9NPH3 570 aa15.95■□□□□ 0.14
SNRPA1-203ENST00000540017 BEX4Q9NWD9 120 aaPredicted RBP15.95■□□□□ 0.14
SNRPA1-203ENST00000540017 CRNNQ9UBG3 495 aaPredicted RBP15.95■□□□□ 0.14
SNRPA1-203ENST00000540017 PRPF19Q9UMS4 504 aaKnown RBP15.95■□□□□ 0.14
SNRPA1-203ENST00000540017 POFUT2Q9Y2G5 429 aa15.95■□□□□ 0.14
SNRPA1-203ENST00000540017 MAGED1Q9Y5V3 778 aaPredicted RBP15.95■□□□□ 0.14
SNRPA1-203ENST00000540017 MCIDASD6RGH6 385 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 E7EQL1 145 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 TRMUO75648 421 aaKnown RBP15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 FABP3P05413 133 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 CELA3BP08861 270 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 HOXB1P14653 301 aaPredicted RBP15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 B4GALT1P15291 398 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 ACADSP16219 412 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 ITGA2P17301 1181 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 OMPP47874 163 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 LIMS1P48059 325 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 MYBPC1Q00872 1141 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 LCN8Q6JVE9 175 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 SLC22A25Q6T423 547 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 ZNF813Q6ZN06 617 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 RRM2BQ7LG56 351 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 KRTAP1-3Q8IUG1 177 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 ZDHHC21Q8IVQ6 265 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 SYT14Q8NB59 555 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 NOXO1Q8NFA2 376 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 OR4K5Q8NGD3 323 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 SMAP2Q8WU79 429 aaPredicted RBP15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 HTRA1Q92743 480 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 HDAC2Q92769 488 aaKnown RBP15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 SLC7A6OSQ96CW6 309 aaPredicted RBP15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 SLC38A2Q96QD8 506 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 GPA33Q99795 319 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 FOXB1Q99853 325 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 TXNIPQ9H3M7 391 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 NOX3Q9HBY0 568 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 CISD1Q9NZ45 108 aaKnown RBP15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 ZNF224Q9NZL3 707 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 ZNF346Q9UL40 294 aaKnown RBP15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 MGAT4BQ9UQ53 548 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 LAMP3Q9UQV4 416 aa15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 MAP1AP78559 2803 aaPredicted RBP15.94■□□□□ 0.14
SNRPA1-203ENST00000540017 SH3PXD2BA1X283 911 aa15.93■□□□□ 0.14
SNRPA1-203ENST00000540017 NPIPB13A6NJU9 1138 aa15.93■□□□□ 0.14
SNRPA1-203ENST00000540017 NPIPB4C9JG80 1138 aa15.93■□□□□ 0.14
SNRPA1-203ENST00000540017 DHHO43323 396 aa15.93■□□□□ 0.14
SNRPA1-203ENST00000540017 IGLV1-44P01699 117 aa15.93■□□□□ 0.14
SNRPA1-203ENST00000540017 IGHG1P01857 330 aa15.93■□□□□ 0.14
SNRPA1-203ENST00000540017 QDPRP09417 244 aa15.93■□□□□ 0.14
SNRPA1-203ENST00000540017 SLC9A3P48764 834 aa15.93■□□□□ 0.14
SNRPA1-203ENST00000540017 DAP3P51398 398 aaKnown RBP15.93■□□□□ 0.14
SNRPA1-203ENST00000540017 CLRN1P58418 232 aa15.93■□□□□ 0.14
SNRPA1-203ENST00000540017 CTXN1P60606 82 aa15.93■□□□□ 0.14
SNRPA1-203ENST00000540017 SPIBQ01892 262 aa15.93■□□□□ 0.14
SNRPA1-203ENST00000540017 TOP3AQ13472 1001 aaPredicted RBP15.93■□□□□ 0.14
SNRPA1-203ENST00000540017 MDP1Q86V88 176 aa15.93■□□□□ 0.14
SNRPA1-203ENST00000540017 DHFR2Q86XF0 187 aa15.93■□□□□ 0.14
SNRPA1-203ENST00000540017 CDK20Q8IZL9 346 aa15.93■□□□□ 0.14
SNRPA1-203ENST00000540017 MCHR2Q969V1 340 aa15.93■□□□□ 0.14
SNRPA1-203ENST00000540017 MCUR1Q96AQ8 359 aa15.93■□□□□ 0.14
SNRPA1-203ENST00000540017 CCDC124Q96CT7 223 aaKnown RBP15.93■□□□□ 0.14
SNRPA1-203ENST00000540017 NMD3Q96D46 503 aaKnown RBP15.93■□□□□ 0.14
SNRPA1-203ENST00000540017 THTPAQ9BU02 230 aa15.93■□□□□ 0.14
SNRPA1-203ENST00000540017 B3GNT2Q9NY97 397 aa15.93■□□□□ 0.14
SNRPA1-203ENST00000540017 MOKQ9UQ07 419 aa15.93■□□□□ 0.14
SNRPA1-203ENST00000540017 VPS13CQ709C8 3753 aa15.93■□□□□ 0.14
SNRPA1-203ENST00000540017 HIVEP1P15822 2718 aa15.93■□□□□ 0.14
SNRPA1-203ENST00000540017 IGKV1D-43A0A0B4J1Z2 117 aa15.92■□□□□ 0.14
SNRPA1-203ENST00000540017 ATP6V1G2-DDX39BF2Z307 99 aa15.92■□□□□ 0.14
SNRPA1-203ENST00000540017 ACOT8O14734 319 aa15.92■□□□□ 0.14
SNRPA1-203ENST00000540017 SMPD2O60906 423 aa15.92■□□□□ 0.14
SNRPA1-203ENST00000540017 PTP4A3O75365 173 aa15.92■□□□□ 0.14
SNRPA1-203ENST00000540017 GADD45GO95257 159 aa15.92■□□□□ 0.14
SNRPA1-203ENST00000540017 IGKV3-15P01624 115 aa15.92■□□□□ 0.14
SNRPA1-203ENST00000540017 CD8AP01732 235 aa15.92■□□□□ 0.14
SNRPA1-203ENST00000540017 IGHMP01871 453 aa15.92■□□□□ 0.14
SNRPA1-203ENST00000540017 HLA-HP01893 362 aa15.92■□□□□ 0.14
SNRPA1-203ENST00000540017 CECR9P0C854 216 aa15.92■□□□□ 0.14
SNRPA1-203ENST00000540017 CBR1P16152 277 aa15.92■□□□□ 0.14
SNRPA1-203ENST00000540017 RRM2P31350 389 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms