RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 SLC19A2O60779 497 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 GAGE7O76087 117 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 LATS1O95835 1130 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 IGHG4P01861 327 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 CRYABP02511 175 aaKnown RBP3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 IFNA6P05013 189 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 CD3GP09693 182 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 GAGE12FP0CL80 117 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 GAGE12GP0CL81 117 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 GAGE12IP0CL82 117 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 GNLYP22749 145 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 HTR2CP28335 458 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 CX3CR1P49238 355 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 SERPINB9P50453 376 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 RPL14P50914 215 aaKnown RBP3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 RWDD2BP57060 319 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 AP3S2P59780 193 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 REEP5Q00765 189 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 PAX2Q02962 417 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 TRAF2Q12933 501 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 GAGE1Q13065 139 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 GAGE4Q13068 117 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 MFAP5Q13361 173 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 MADCAM1Q13477 382 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 SGCAQ16586 387 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 LRRC37A5PQ49AS3 106 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 TP53I3Q53FA7 332 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 BEND6Q5SZJ8 279 aaPredicted RBP3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 TRNP1Q6NT89 227 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 ACSM5Q6NUN0 579 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 STEAP1BQ6NZ63 245 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 PRMT9Q6P2P2 845 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 RFPL4BQ6ZWI9 263 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 ZNF100Q8IYN0 542 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 METTL4Q8N3J2 472 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 ARFGAP1Q8N6T3 406 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 TTC29Q8NA56 475 aaPredicted RBP3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 CCDC112Q8NEF3 446 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 ZNF680Q8NEM1 530 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 SEMA6DQ8NFY4 1073 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 OR5L2Q8NGL0 311 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 OR1B1Q8NGR6 318 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 OR52N5Q8NH56 324 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 C8orf46Q8TAG6 207 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 PLPPR1Q8TBJ4 325 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 TEX47Q8TBZ9 253 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 MRAPQ8TCY5 172 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 GPR148Q8TDV2 347 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 RPL36ALQ969Q0 106 aaKnown RBP3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 UBE2E3Q969T4 207 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 CPNE4Q96A23 557 aaPredicted RBP3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 TMA16Q96EY4 203 aaKnown RBP3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 SNF8Q96H20 258 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 NSL1Q96IY1 281 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 DNAJC1Q96KC8 554 aaKnown RBP3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 TNFRSF13CQ96RJ3 184 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 NEURL2Q9BR09 285 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 NIPSNAP3BQ9BS92 247 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 URM1Q9BTM9 101 aaKnown RBP3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 TRAF4Q9BUZ4 470 aaPredicted RBP3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 UCK2Q9BZX2 261 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 TOLLIPQ9H0E2 274 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 NEUROG2Q9H2A3 272 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 ALG9Q9H6U8 611 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 TRIM45Q9H8W5 580 aaPredicted RBP3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 FOLH1BQ9HBA9 442 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 VCX3AQ9NNX9 186 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 OLFML3Q9NRN5 406 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 PURGQ9UJV8 347 aaKnown RBP3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 AK6Q9Y3D8 172 aaKnown RBP3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 ALG6Q9Y672 507 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 CABIN1Q9Y6J0 2220 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 DCHS2Q6V1P9 2916 aa3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 SPTBN1Q01082 2364 aaKnown RBP3.29□□□□□ -1.88
AC055720.1-201ENST00000539552 ZMYM2Q9UBW7 1377 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 TLN2Q9Y4G6 2542 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 NSG1A0A0A6YYJ2 146 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 A0A1B0GUS0 222 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 RPS10-NUDT3A0A1W2PQS6 291 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 A0A1W2PRF3 423 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 A0A1W2PRM7 423 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 LRIT2A6NDA9 550 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 GOLGA6L10A6NI86 522 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 A8MVM7 634 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 PRMT5O14744 637 aaPredicted RBP3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 AIM2O14862 343 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 CASKO14936 926 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 EPHB6O15197 1021 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 PCDH7O60245 1069 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 KHDRBS3O75525 346 aaKnown RBP3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 SC5DO75845 299 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 ANXA9O76027 345 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 DEXIO95424 95 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 TSPAN13O95857 204 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 F10P00742 488 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 CA1P00915 261 aaPredicted RBP3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 MMP1P03956 469 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 ATP1A1P05023 1023 aaKnown RBP3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 ATP1B1P05026 303 aa3.28□□□□□ -1.88
AC055720.1-201ENST00000539552 IL6P05231 212 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms