RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 ALG10Q5BKT4 473 aa8.78□□□□□ -1
CDH13-204ENST00000539548 TMEM196Q5HYL7 178 aa8.78□□□□□ -1
CDH13-204ENST00000539548 EMC4Q5J8M3 183 aa8.78□□□□□ -1
CDH13-204ENST00000539548 WBP2NLQ6ICG8 309 aa8.78□□□□□ -1
CDH13-204ENST00000539548 OR7E24Q6IFN5 339 aa8.78□□□□□ -1
CDH13-204ENST00000539548 ARSKQ6UWY0 536 aa8.78□□□□□ -1
CDH13-204ENST00000539548 KRT77Q7Z794 578 aa8.78□□□□□ -1
CDH13-204ENST00000539548 PDZD9Q8IXQ8 264 aa8.78□□□□□ -1
CDH13-204ENST00000539548 ZNF676Q8N7Q3 588 aa8.78□□□□□ -1
CDH13-204ENST00000539548 ZBTB44Q8NCP5 570 aa8.78□□□□□ -1
CDH13-204ENST00000539548 LSM14AQ8ND56 463 aaKnown RBP8.78□□□□□ -1
CDH13-204ENST00000539548 BVESQ8NE79 360 aa8.78□□□□□ -1
CDH13-204ENST00000539548 OR5M9Q8NGP3 310 aa8.78□□□□□ -1
CDH13-204ENST00000539548 PHOSPHO2Q8TCD6 241 aa8.78□□□□□ -1
CDH13-204ENST00000539548 GPR148Q8TDV2 347 aa8.78□□□□□ -1
CDH13-204ENST00000539548 MCHR2Q969V1 340 aa8.78□□□□□ -1
CDH13-204ENST00000539548 TOE1Q96GM8 510 aaKnown RBP8.78□□□□□ -1
CDH13-204ENST00000539548 GABRG3Q99928 467 aa8.78□□□□□ -1
CDH13-204ENST00000539548 COMMD4Q9H0A8 199 aa8.78□□□□□ -1
CDH13-204ENST00000539548 ALX4Q9H161 411 aaPredicted RBP8.78□□□□□ -1
CDH13-204ENST00000539548 FBRSQ9HAH7 460 aa8.78□□□□□ -1
CDH13-204ENST00000539548 HRASLS2Q9NWW9 162 aa8.78□□□□□ -1
CDH13-204ENST00000539548 LAMP5Q9UJQ1 280 aa8.78□□□□□ -1
CDH13-204ENST00000539548 FXYD6-FXYD2A0A087WZ82 144 aa8.78□□□□□ -1
CDH13-204ENST00000539548 SLC22A23A1A5C7 686 aa8.78□□□□□ -1
CDH13-204ENST00000539548 DCTN6O00399 190 aa8.78□□□□□ -1
CDH13-204ENST00000539548 GOSR2O14653 212 aa8.78□□□□□ -1
CDH13-204ENST00000539548 PRAMEF2O60811 474 aa8.78□□□□□ -1
CDH13-204ENST00000539548 PROS1P07225 676 aa8.78□□□□□ -1
CDH13-204ENST00000539548 MELTFP08582 738 aa8.78□□□□□ -1
CDH13-204ENST00000539548 ALOX5APP20292 161 aa8.78□□□□□ -1
CDH13-204ENST00000539548 GPR3P46089 330 aa8.78□□□□□ -1
CDH13-204ENST00000539548 PGDP52209 483 aa8.78□□□□□ -1
CDH13-204ENST00000539548 DMWDQ09019 674 aa8.78□□□□□ -1
CDH13-204ENST00000539548 RASGEF1BQ0VAM2 473 aa8.78□□□□□ -1
CDH13-204ENST00000539548 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.78□□□□□ -1
CDH13-204ENST00000539548 NKAIN2Q5VXU1 208 aa8.78□□□□□ -1
CDH13-204ENST00000539548 ATG4DQ86TL0 474 aaPredicted RBP8.78□□□□□ -1
CDH13-204ENST00000539548 CDH26Q8IXH8 852 aa8.78□□□□□ -1
CDH13-204ENST00000539548 PRSS35Q8N3Z0 413 aa8.78□□□□□ -1
CDH13-204ENST00000539548 ARHGEF39Q8N4T4 335 aa8.78□□□□□ -1
CDH13-204ENST00000539548 C10orf53Q8N6V4 93 aa8.78□□□□□ -1
CDH13-204ENST00000539548 OR6K3Q8NGY3 331 aa8.78□□□□□ -1
CDH13-204ENST00000539548 THRSPQ92748 146 aa8.78□□□□□ -1
CDH13-204ENST00000539548 TMEM106AQ96A25 262 aa8.78□□□□□ -1
CDH13-204ENST00000539548 MOGAT1Q96PD6 335 aa8.78□□□□□ -1
CDH13-204ENST00000539548 CCDC3Q9BQI4 270 aa8.78□□□□□ -1
CDH13-204ENST00000539548 FXYD6Q9H0Q3 95 aa8.78□□□□□ -1
CDH13-204ENST00000539548 WDR76Q9H967 626 aa8.78□□□□□ -1
CDH13-204ENST00000539548 MMP25Q9NPA2 562 aa8.78□□□□□ -1
CDH13-204ENST00000539548 SLC17A5Q9NRA2 495 aa8.78□□□□□ -1
CDH13-204ENST00000539548 CPNE7Q9UBL6 633 aa8.78□□□□□ -1
CDH13-204ENST00000539548 IKZF2Q9UKS7 526 aa8.78□□□□□ -1
CDH13-204ENST00000539548 TMEM14AQ9Y6G1 99 aa8.78□□□□□ -1
CDH13-204ENST00000539548 MPDZO75970 2070 aa8.77□□□□□ -1
CDH13-204ENST00000539548 TRAV18A0A075B6X5 111 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 TVP23AA6NH52 213 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 POM121CA8CG34 1229 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 H0YC42 278 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 HCRTR1O43613 425 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 SRPX2O60687 465 aaPredicted RBP8.77□□□□□ -1.01
CDH13-204ENST00000539548 ASAH2BP0C7U1 165 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 RNH1P13489 461 aaKnown RBP8.77□□□□□ -1.01
CDH13-204ENST00000539548 GTF2F2P13984 249 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 RPA2P15927 270 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 GDI1P31150 447 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 PRSS3P35030 304 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 ADH7P40394 386 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 EFNB2P52799 333 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 OC90Q02509 493 aaPredicted RBP8.77□□□□□ -1.01
CDH13-204ENST00000539548 ZNF273Q14593 569 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 ALG11Q2TAA5 492 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 DCAF12L2Q5VW00 463 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 ZNF660Q6AZW8 331 aaPredicted RBP8.77□□□□□ -1.01
CDH13-204ENST00000539548 FDX2Q6P4F2 183 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 TSSK4Q6SA08 328 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 OR51D1Q8NGF3 324 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 OR4D10Q8NGI6 311 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 OR51S1Q8NGJ8 323 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 OR10AC1Q8NH08 325 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 ELSPBP1Q96BH3 223 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 SIPA1Q96FS4 1042 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 DCBLD2Q96PD2 775 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 DMRTA2Q96SC8 542 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 C1orf198Q9H425 327 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 LDAHQ9H6V9 325 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 APMAPQ9HDC9 416 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 EXOSC3Q9NQT5 275 aaKnown RBP8.77□□□□□ -1.01
CDH13-204ENST00000539548 GRHPRQ9UBQ7 328 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 OR10H1Q9Y4A9 318 aa8.77□□□□□ -1.01
CDH13-204ENST00000539548 A0A1W2PQF6 199 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 BLACEA4D250 179 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 D6RAR5 112 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 LGALS8O00214 317 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 PHYHO14832 338 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 AKR7A3O95154 331 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 ITGB2P05107 769 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 COL9A1P20849 921 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 MPGP29372 298 aa8.76□□□□□ -1.01
CDH13-204ENST00000539548 KIR3DL2P43630 455 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms