RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 TMEM255BQ8WV15 326 aa16.5■□□□□ 0.23
TNFRSF1A-212ENST00000539372 TMEM54Q969K7 222 aa16.5■□□□□ 0.23
TNFRSF1A-212ENST00000539372 ZNF442Q9H7R0 627 aa16.5■□□□□ 0.23
TNFRSF1A-212ENST00000539372 GID8Q9NWU2 228 aa16.5■□□□□ 0.23
TNFRSF1A-212ENST00000539372 GLTPQ9NZD2 209 aa16.5■□□□□ 0.23
TNFRSF1A-212ENST00000539372 ZNF224Q9NZL3 707 aa16.5■□□□□ 0.23
TNFRSF1A-212ENST00000539372 CAPN7Q9Y6W3 813 aa16.5■□□□□ 0.23
TNFRSF1A-212ENST00000539372 FAM220BPB1ANY3 271 aa16.49■□□□□ 0.23
TNFRSF1A-212ENST00000539372 BLOC1S5-TXNDC5H3BN57 136 aa16.49■□□□□ 0.23
TNFRSF1A-212ENST00000539372 PATE4P0C8F1 98 aa16.49■□□□□ 0.23
TNFRSF1A-212ENST00000539372 NPR2P20594 1047 aa16.49■□□□□ 0.23
TNFRSF1A-212ENST00000539372 GIPRP48546 466 aa16.49■□□□□ 0.23
TNFRSF1A-212ENST00000539372 UGT2B15P54855 530 aa16.49■□□□□ 0.23
TNFRSF1A-212ENST00000539372 PIN1Q13526 163 aaPredicted RBP16.49■□□□□ 0.23
TNFRSF1A-212ENST00000539372 DAG1Q14118 895 aa16.49■□□□□ 0.23
TNFRSF1A-212ENST00000539372 IL17RDQ8NFM7 739 aa16.49■□□□□ 0.23
TNFRSF1A-212ENST00000539372 ZNF566Q969W8 418 aa16.49■□□□□ 0.23
TNFRSF1A-212ENST00000539372 RCN3Q96D15 328 aa16.49■□□□□ 0.23
TNFRSF1A-212ENST00000539372 RIMS3Q9UJD0 308 aa16.49■□□□□ 0.23
TNFRSF1A-212ENST00000539372 SH3PXD2BA1X283 911 aa16.48■□□□□ 0.23
TNFRSF1A-212ENST00000539372 A8MV72 311 aaPredicted RBP16.48■□□□□ 0.23
TNFRSF1A-212ENST00000539372 VSTM5A8MXK1 200 aa16.48■□□□□ 0.23
TNFRSF1A-212ENST00000539372 RAB36O95755 333 aa16.48■□□□□ 0.23
TNFRSF1A-212ENST00000539372 BCL10O95999 233 aa16.48■□□□□ 0.23
TNFRSF1A-212ENST00000539372 IFNA14P01570 189 aa16.48■□□□□ 0.23
TNFRSF1A-212ENST00000539372 MT-ND1P03886 318 aa16.48■□□□□ 0.23
TNFRSF1A-212ENST00000539372 F13BP05160 661 aa16.48■□□□□ 0.23
TNFRSF1A-212ENST00000539372 ZNF14P17017 642 aaPredicted RBP16.48■□□□□ 0.23
TNFRSF1A-212ENST00000539372 USF1P22415 310 aaPredicted RBP16.48■□□□□ 0.23
TNFRSF1A-212ENST00000539372 PPOXP50336 477 aa16.48■□□□□ 0.23
TNFRSF1A-212ENST00000539372 CYBRD1Q53TN4 286 aa16.48■□□□□ 0.23
TNFRSF1A-212ENST00000539372 LRFN4Q6PJG9 635 aa16.48■□□□□ 0.23
TNFRSF1A-212ENST00000539372 SKA3Q8IX90 412 aa16.48■□□□□ 0.23
TNFRSF1A-212ENST00000539372 ZCCHC24Q8N2G6 241 aaKnown RBP16.48■□□□□ 0.23
TNFRSF1A-212ENST00000539372 OR2T12Q8NG77 320 aa16.48■□□□□ 0.23
TNFRSF1A-212ENST00000539372 FGFBP3Q8TAT2 258 aa16.48■□□□□ 0.23
TNFRSF1A-212ENST00000539372 SLC25A44Q96H78 314 aaPredicted RBP16.48■□□□□ 0.23
TNFRSF1A-212ENST00000539372 TPD52L3Q96J77 140 aa16.48■□□□□ 0.23
TNFRSF1A-212ENST00000539372 ZNF75AQ96N20 296 aa16.48■□□□□ 0.23
TNFRSF1A-212ENST00000539372 C20orf141Q9NUB4 165 aa16.48■□□□□ 0.23
TNFRSF1A-212ENST00000539372 GMPR2Q9P2T1 348 aaKnown RBP16.48■□□□□ 0.23
TNFRSF1A-212ENST00000539372 CHD3Q12873 2000 aaKnown RBP16.48■□□□□ 0.23
TNFRSF1A-212ENST00000539372 TMEM129A0AVI4 362 aa16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 OR7A10O76100 309 aa16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 OR5F1O95221 314 aa16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 PGA4P0DJD7 388 aa16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 PGA3P0DJD8 388 aa16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 FUT1P19526 365 aa16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 NR4A1P22736 598 aa16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 KDELR2P33947 212 aa16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 RBM34P42696 430 aaKnown RBP16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 RAB1AP62820 205 aa16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 VLDLRP98155 873 aa16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 RUNX1T1Q06455 604 aa16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 RPL18Q07020 188 aaKnown RBP16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 GGTLC2Q14390 218 aa16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 RAB39AQ14964 217 aa16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 HSP90B2PQ58FF3 399 aa16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 C6orf52Q5T4I8 152 aa16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 MICU2Q8IYU8 434 aa16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 CDK20Q8IZL9 346 aa16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 TMEM239Q8WW34 195 aa16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 SGTBQ96EQ0 304 aa16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 FOXN4Q96NZ1 517 aa16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 DOK1Q99704 481 aa16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 MDFIQ99750 246 aa16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 PIMREGQ9BSJ6 248 aa16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 RAB1BQ9H0U4 201 aa16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 CCDC134Q9H6E4 229 aa16.47■□□□□ 0.23
TNFRSF1A-212ENST00000539372 VWC2LB2RUY7 222 aa16.46■□□□□ 0.23
TNFRSF1A-212ENST00000539372 UBL3O95164 117 aa16.46■□□□□ 0.23
TNFRSF1A-212ENST00000539372 QDPRP09417 244 aa16.46■□□□□ 0.23
TNFRSF1A-212ENST00000539372 ZNF35P13682 527 aa16.46■□□□□ 0.23
TNFRSF1A-212ENST00000539372 AQP2P41181 271 aa16.46■□□□□ 0.23
TNFRSF1A-212ENST00000539372 NR4A2P43354 598 aa16.46■□□□□ 0.23
TNFRSF1A-212ENST00000539372 CLRN1P58418 232 aa16.46■□□□□ 0.23
TNFRSF1A-212ENST00000539372 MSMPQ1L6U9 139 aa16.46■□□□□ 0.23
TNFRSF1A-212ENST00000539372 PIWIL3Q7Z3Z3 882 aaKnown RBP16.46■□□□□ 0.23
TNFRSF1A-212ENST00000539372 SLC22A24Q8N4F4 322 aa16.46■□□□□ 0.23
TNFRSF1A-212ENST00000539372 SH3GL3Q99963 347 aa16.46■□□□□ 0.23
TNFRSF1A-212ENST00000539372 POLR2J2Q9GZM3 115 aaKnown RBP16.46■□□□□ 0.23
TNFRSF1A-212ENST00000539372 POLR2J3Q9H1A7 115 aaKnown RBP16.46■□□□□ 0.23
TNFRSF1A-212ENST00000539372 DYNLRB1Q9NP97 96 aa16.46■□□□□ 0.23
TNFRSF1A-212ENST00000539372 TMEM38BQ9NVV0 291 aa16.46■□□□□ 0.23
TNFRSF1A-212ENST00000539372 CMTM6Q9NX76 183 aa16.46■□□□□ 0.23
TNFRSF1A-212ENST00000539372 CMAHPQ9Y471 501 aa16.46■□□□□ 0.23
TNFRSF1A-212ENST00000539372 A0A1W2PRG6 482 aa16.45■□□□□ 0.22
TNFRSF1A-212ENST00000539372 ELOVL7A1L3X0 281 aa16.45■□□□□ 0.22
TNFRSF1A-212ENST00000539372 MCIDASD6RGH6 385 aa16.45■□□□□ 0.22
TNFRSF1A-212ENST00000539372 SLC22A2O15244 555 aa16.45■□□□□ 0.22
TNFRSF1A-212ENST00000539372 DHHO43323 396 aa16.45■□□□□ 0.22
TNFRSF1A-212ENST00000539372 PIP5K1CO60331 668 aa16.45■□□□□ 0.22
TNFRSF1A-212ENST00000539372 IGHG1P01857 330 aa16.45■□□□□ 0.22
TNFRSF1A-212ENST00000539372 IGHV4-31P0DP07 118 aa16.45■□□□□ 0.22
TNFRSF1A-212ENST00000539372 LSM11P83369 360 aaKnown RBP eCLIP16.45■□□□□ 0.22
TNFRSF1A-212ENST00000539372 MYBPC1Q00872 1141 aa16.45■□□□□ 0.22
TNFRSF1A-212ENST00000539372 GKAP1Q5VSY0 366 aaPredicted RBP16.45■□□□□ 0.22
TNFRSF1A-212ENST00000539372 CYB5R2Q6BCY4 276 aa16.45■□□□□ 0.22
TNFRSF1A-212ENST00000539372 HIPK1Q86Z02 1210 aa16.45■□□□□ 0.22
TNFRSF1A-212ENST00000539372 SYT14Q8NB59 555 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms