RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 BLOC1S5-TXNDC5H3BN57 136 aa11.95□□□□□ -0.5
CD9-208ENST00000538834 RNF13O43567 381 aa11.95□□□□□ -0.5
CD9-208ENST00000538834 UBOX5O94941 541 aa11.95□□□□□ -0.5
CD9-208ENST00000538834 CD8AP01732 235 aa11.95□□□□□ -0.5
CD9-208ENST00000538834 F13BP05160 661 aa11.95□□□□□ -0.5
CD9-208ENST00000538834 TAF11Q15544 211 aa11.95□□□□□ -0.5
CD9-208ENST00000538834 NRN1LQ496H8 165 aa11.95□□□□□ -0.5
CD9-208ENST00000538834 C10orf128Q5T292 105 aa11.95□□□□□ -0.5
CD9-208ENST00000538834 FBXW10Q5XX13 1052 aa11.95□□□□□ -0.5
CD9-208ENST00000538834 HMBOX1Q6NT76 420 aa11.95□□□□□ -0.5
CD9-208ENST00000538834 TMEM108Q6UXF1 575 aa11.95□□□□□ -0.5
CD9-208ENST00000538834 DTX2Q86UW9 622 aa11.95□□□□□ -0.5
CD9-208ENST00000538834 CYP4Z1Q86W10 505 aa11.95□□□□□ -0.5
CD9-208ENST00000538834 CCDC36Q8IYA8 594 aa11.95□□□□□ -0.5
CD9-208ENST00000538834 KBTBD8Q8NFY9 601 aa11.95□□□□□ -0.5
CD9-208ENST00000538834 ZNF519Q8TB69 540 aa11.95□□□□□ -0.5
CD9-208ENST00000538834 AKAP1Q92667 903 aaKnown RBP eCLIP11.95□□□□□ -0.5
CD9-208ENST00000538834 PIGTQ969N2 578 aa11.95□□□□□ -0.5
CD9-208ENST00000538834 TNFRSF13CQ96RJ3 184 aa11.95□□□□□ -0.5
CD9-208ENST00000538834 KCNK17Q96T54 332 aa11.95□□□□□ -0.5
CD9-208ENST00000538834 GPA33Q99795 319 aa11.95□□□□□ -0.5
CD9-208ENST00000538834 INIPQ9NRY2 104 aa11.95□□□□□ -0.5
CD9-208ENST00000538834 SIGLEC7Q9Y286 467 aa11.95□□□□□ -0.5
CD9-208ENST00000538834 IGHV1-18A0A0C4DH31 117 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 SH3PXD2BA1X283 911 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 ZNF726A6NNF4 738 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 hCG_2039718K7EN88 272 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 M0R3G1 203 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 ABCD4O14678 606 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 CLOCKO15516 846 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 GMNNO75496 209 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 TRMUO75648 421 aaKnown RBP11.94□□□□□ -0.5
CD9-208ENST00000538834 DIRAS1O95057 198 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 OR6A2O95222 327 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 BCL10O95999 233 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 WNT11O96014 354 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 UMPSP11172 480 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 CBR1P16152 277 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 ACADSP16219 412 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 ITGA2P17301 1181 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 ART1P52961 327 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 BNIP1Q12981 228 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 KEAP1Q14145 624 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 MELKQ14680 651 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 KLHL17Q6TDP4 642 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 B3GLCTQ6Y288 498 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 FAM122BQ7Z309 247 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 ZNF566Q969W8 418 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 ASB9Q96DX5 294 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 GPX7Q96SL4 187 aaPredicted RBP11.94□□□□□ -0.5
CD9-208ENST00000538834 GSX2Q9BZM3 304 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 MAGIXQ9H6Y5 334 aa11.94□□□□□ -0.5
CD9-208ENST00000538834 MOV10Q9HCE1 1003 aaKnown RBP11.94□□□□□ -0.5
CD9-208ENST00000538834 E7EQL1 145 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 DHHO43323 396 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 KRT33AO76009 404 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 SOD3P08294 240 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 CSNK1A1P48729 337 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 ZNF83P51522 516 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 MXRA7P84157 204 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 SPOCK1Q08629 439 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 TRAP1Q12931 704 aaKnown RBP11.93□□□□□ -0.5
CD9-208ENST00000538834 ZBED5Q49AG3 693 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 ALG10Q5BKT4 473 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 CARD17Q5XLA6 110 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 C11orf71Q6IPW1 123 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 SLC25A47Q6Q0C1 308 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 ZNF730Q6ZMV8 503 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 FOXL2NBQ6ZUU3 175 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 ZER1Q7Z7L7 766 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 MYPOPQ86VE0 399 aaPredicted RBP11.93□□□□□ -0.5
CD9-208ENST00000538834 MEX3DQ86XN8 651 aaKnown RBP11.93□□□□□ -0.5
CD9-208ENST00000538834 OR4K5Q8NGD3 323 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 HDAC2Q92769 488 aaKnown RBP11.93□□□□□ -0.5
CD9-208ENST00000538834 POP5Q969H6 163 aaKnown RBP11.93□□□□□ -0.5
CD9-208ENST00000538834 FBXW5Q969U6 566 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 MCHR2Q969V1 340 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 FOXB1Q99853 325 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 DENND2DQ9H6A0 471 aaPredicted RBP11.93□□□□□ -0.5
CD9-208ENST00000538834 UBTD1Q9HAC8 227 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 SMURF2Q9HAU4 748 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 NOX3Q9HBY0 568 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 B3GAT2Q9NPZ5 323 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 NRIP3Q9NQ35 241 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 ZNF346Q9UL40 294 aaKnown RBP11.93□□□□□ -0.5
CD9-208ENST00000538834 TMEM5Q9Y2B1 443 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 FAM32AQ9Y421 112 aaKnown RBP11.93□□□□□ -0.5
CD9-208ENST00000538834 UGT2A1Q9Y4X1 527 aa11.93□□□□□ -0.5
CD9-208ENST00000538834 TRAV27A0A087WT01 109 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 A0A096LPE4 126 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 IGKV1D-43A0A0B4J1Z2 117 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 A0A1W2PPZ6 126 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 A0A1W2PRG6 482 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 EFCAB9A8MZ26 197 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 MGRN1O60291 552 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 IGHG1P01857 330 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 FABP3P05413 133 aa11.92□□□□□ -0.5
CD9-208ENST00000538834 ZNF14P17017 642 aaPredicted RBP11.92□□□□□ -0.5
CD9-208ENST00000538834 CDH2P19022 906 aaPredicted RBP11.92□□□□□ -0.5
CD9-208ENST00000538834 GSSP48637 474 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms