RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 ARR3P36575 388 aa12.97□□□□□ -0.33
RAB40B-202ENST00000538809 SERPINF1P36955 418 aa12.97□□□□□ -0.33
RAB40B-202ENST00000538809 RBM34P42696 430 aaKnown RBP12.97□□□□□ -0.33
RAB40B-202ENST00000538809 SLC7A2P52569 658 aa12.97□□□□□ -0.33
RAB40B-202ENST00000538809 TAS2R41P59536 307 aa12.97□□□□□ -0.33
RAB40B-202ENST00000538809 LIPEQ05469 1076 aa12.97□□□□□ -0.33
RAB40B-202ENST00000538809 PIGFQ07326 219 aa12.97□□□□□ -0.33
RAB40B-202ENST00000538809 PIN1Q13526 163 aaPredicted RBP12.97□□□□□ -0.33
RAB40B-202ENST00000538809 SLC35D2Q76EJ3 337 aa12.97□□□□□ -0.33
RAB40B-202ENST00000538809 NANOGNBQ7Z5D8 188 aa12.97□□□□□ -0.33
RAB40B-202ENST00000538809 C10orf105Q8TEF2 133 aa12.97□□□□□ -0.33
RAB40B-202ENST00000538809 TMEM255BQ8WV15 326 aa12.97□□□□□ -0.33
RAB40B-202ENST00000538809 MS4A3Q96HJ5 214 aa12.97□□□□□ -0.33
RAB40B-202ENST00000538809 FOXB1Q99853 325 aa12.97□□□□□ -0.33
RAB40B-202ENST00000538809 VRK1Q99986 396 aaPredicted RBP12.97□□□□□ -0.33
RAB40B-202ENST00000538809 EFCAB1Q9HAE3 211 aa12.97□□□□□ -0.33
RAB40B-202ENST00000538809 MOV10Q9HCE1 1003 aaKnown RBP12.97□□□□□ -0.33
RAB40B-202ENST00000538809 YAE1D1Q9NRH1 226 aa12.97□□□□□ -0.33
RAB40B-202ENST00000538809 ABCD2Q9UBJ2 740 aa12.97□□□□□ -0.33
RAB40B-202ENST00000538809 RIMS3Q9UJD0 308 aa12.97□□□□□ -0.33
RAB40B-202ENST00000538809 A4GNTQ9UNA3 340 aa12.97□□□□□ -0.33
RAB40B-202ENST00000538809 KIAA1324LA8MWY0 1029 aaPredicted RBP12.96□□□□□ -0.33
RAB40B-202ENST00000538809 PDE5AO76074 875 aa12.96□□□□□ -0.33
RAB40B-202ENST00000538809 MT-ND1P03886 318 aa12.96□□□□□ -0.33
RAB40B-202ENST00000538809 THRBP10828 461 aa12.96□□□□□ -0.33
RAB40B-202ENST00000538809 FUT4P22083 530 aa12.96□□□□□ -0.33
RAB40B-202ENST00000538809 PRDX6P30041 224 aa12.96□□□□□ -0.33
RAB40B-202ENST00000538809 LSP1P33241 339 aa12.96□□□□□ -0.33
RAB40B-202ENST00000538809 GSK3BP49841 420 aa12.96□□□□□ -0.33
RAB40B-202ENST00000538809 DSCR9P59020 149 aa12.96□□□□□ -0.33
RAB40B-202ENST00000538809 SNTB2Q13425 540 aaKnown RBP12.96□□□□□ -0.33
RAB40B-202ENST00000538809 GSG1Q2KHT4 349 aa12.96□□□□□ -0.33
RAB40B-202ENST00000538809 KRT80Q6KB66 452 aa12.96□□□□□ -0.33
RAB40B-202ENST00000538809 NUP37Q8NFH4 326 aa12.96□□□□□ -0.33
RAB40B-202ENST00000538809 OR4F15Q8NGB8 312 aa12.96□□□□□ -0.33
RAB40B-202ENST00000538809 OR6X1Q8NH79 312 aa12.96□□□□□ -0.33
RAB40B-202ENST00000538809 LIPHQ8WWY8 451 aa12.96□□□□□ -0.33
RAB40B-202ENST00000538809 TMEM54Q969K7 222 aa12.96□□□□□ -0.33
RAB40B-202ENST00000538809 PRRC1Q96M27 445 aa12.96□□□□□ -0.33
RAB40B-202ENST00000538809 C20orf141Q9NUB4 165 aa12.96□□□□□ -0.33
RAB40B-202ENST00000538809 B3GNT2Q9NY97 397 aa12.96□□□□□ -0.33
RAB40B-202ENST00000538809 ZNF224Q9NZL3 707 aa12.96□□□□□ -0.33
RAB40B-202ENST00000538809 ADAM21Q9UKJ8 722 aa12.96□□□□□ -0.33
RAB40B-202ENST00000538809 FKBP7Q9Y680 259 aa12.96□□□□□ -0.33
RAB40B-202ENST00000538809 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.96□□□□□ -0.34
RAB40B-202ENST00000538809 B9A039 149 aa12.95□□□□□ -0.34
RAB40B-202ENST00000538809 hCG_2039718K7EN88 272 aa12.95□□□□□ -0.34
RAB40B-202ENST00000538809 CXCR6O00574 342 aa12.95□□□□□ -0.34
RAB40B-202ENST00000538809 PIP5K1CO60331 668 aa12.95□□□□□ -0.34
RAB40B-202ENST00000538809 OR7A10O76100 309 aa12.95□□□□□ -0.34
RAB40B-202ENST00000538809 HIST1H2ABP04908 130 aa12.95□□□□□ -0.34
RAB40B-202ENST00000538809 SLC25A16P16260 332 aa12.95□□□□□ -0.34
RAB40B-202ENST00000538809 PTDSS1P48651 473 aaKnown RBP12.95□□□□□ -0.34
RAB40B-202ENST00000538809 NUDT2P50583 147 aa12.95□□□□□ -0.34
RAB40B-202ENST00000538809 EFNB3Q15768 340 aa12.95□□□□□ -0.34
RAB40B-202ENST00000538809 CARTPTQ16568 116 aa12.95□□□□□ -0.34
RAB40B-202ENST00000538809 TMEM249Q2WGJ8 235 aa12.95□□□□□ -0.34
RAB40B-202ENST00000538809 CBLL1Q75N03 491 aa12.95□□□□□ -0.34
RAB40B-202ENST00000538809 HIST3H2AQ7L7L0 130 aa12.95□□□□□ -0.34
RAB40B-202ENST00000538809 VTCN1Q7Z7D3 282 aa12.95□□□□□ -0.34
RAB40B-202ENST00000538809 SVOPLQ8N434 492 aa12.95□□□□□ -0.34
RAB40B-202ENST00000538809 TMEM239Q8WW34 195 aa12.95□□□□□ -0.34
RAB40B-202ENST00000538809 HIST1H2ACQ93077 130 aa12.95□□□□□ -0.34
RAB40B-202ENST00000538809 TPD52L3Q96J77 140 aa12.95□□□□□ -0.34
RAB40B-202ENST00000538809 ZNF75AQ96N20 296 aa12.95□□□□□ -0.34
RAB40B-202ENST00000538809 MAN2C1Q9NTJ4 1040 aa12.95□□□□□ -0.34
RAB40B-202ENST00000538809 GLTPQ9NZD2 209 aa12.95□□□□□ -0.34
RAB40B-202ENST00000538809 BLOC1S5-TXNDC5H3BN57 136 aa12.94□□□□□ -0.34
RAB40B-202ENST00000538809 CRLF1O75462 422 aa12.94□□□□□ -0.34
RAB40B-202ENST00000538809 PRSS23O95084 383 aa12.94□□□□□ -0.34
RAB40B-202ENST00000538809 F12P00748 615 aaPredicted RBP12.94□□□□□ -0.34
RAB40B-202ENST00000538809 F13BP05160 661 aa12.94□□□□□ -0.34
RAB40B-202ENST00000538809 CSF3P09919 207 aa12.94□□□□□ -0.34
RAB40B-202ENST00000538809 PATE4P0C8F1 98 aa12.94□□□□□ -0.34
RAB40B-202ENST00000538809 ZNF14P17017 642 aaPredicted RBP12.94□□□□□ -0.34
RAB40B-202ENST00000538809 NPR2P20594 1047 aa12.94□□□□□ -0.34
RAB40B-202ENST00000538809 GIPRP48546 466 aa12.94□□□□□ -0.34
RAB40B-202ENST00000538809 PDLIM4P50479 330 aa12.94□□□□□ -0.34
RAB40B-202ENST00000538809 GYS2P54840 703 aa12.94□□□□□ -0.34
RAB40B-202ENST00000538809 LSM11P83369 360 aaKnown RBP eCLIP12.94□□□□□ -0.34
RAB40B-202ENST00000538809 MYBPC1Q00872 1141 aa12.94□□□□□ -0.34
RAB40B-202ENST00000538809 RPL18Q07020 188 aaKnown RBP12.94□□□□□ -0.34
RAB40B-202ENST00000538809 DAG1Q14118 895 aa12.94□□□□□ -0.34
RAB40B-202ENST00000538809 TSEN54Q7Z6J9 526 aaKnown RBP12.94□□□□□ -0.34
RAB40B-202ENST00000538809 CCDC36Q8IYA8 594 aa12.94□□□□□ -0.34
RAB40B-202ENST00000538809 CDK20Q8IZL9 346 aa12.94□□□□□ -0.34
RAB40B-202ENST00000538809 FGFBP3Q8TAT2 258 aa12.94□□□□□ -0.34
RAB40B-202ENST00000538809 ZNF566Q969W8 418 aa12.94□□□□□ -0.34
RAB40B-202ENST00000538809 CMTM5Q96DZ9 223 aa12.94□□□□□ -0.34
RAB40B-202ENST00000538809 SGTBQ96EQ0 304 aa12.94□□□□□ -0.34
RAB40B-202ENST00000538809 TNFRSF13CQ96RJ3 184 aa12.94□□□□□ -0.34
RAB40B-202ENST00000538809 SEPHS2Q99611 448 aa12.94□□□□□ -0.34
RAB40B-202ENST00000538809 PLK3Q9H4B4 646 aa12.94□□□□□ -0.34
RAB40B-202ENST00000538809 ZNF442Q9H7R0 627 aa12.94□□□□□ -0.34
RAB40B-202ENST00000538809 SNX13Q9Y5W8 968 aa12.94□□□□□ -0.34
RAB40B-202ENST00000538809 SH3PXD2BA1X283 911 aa12.93□□□□□ -0.34
RAB40B-202ENST00000538809 GMNCA6NCL1 334 aa12.93□□□□□ -0.34
RAB40B-202ENST00000538809 MCIDASD6RGH6 385 aa12.93□□□□□ -0.34
RAB40B-202ENST00000538809 FFAR1O14842 300 aa12.93□□□□□ -0.34
RAB40B-202ENST00000538809 TLX2O43763 284 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms