RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 SRMP19623 302 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 ITPKBP27987 946 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 THBS4P35443 961 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 STXBP1P61764 594 aaKnown RBP11.37□□□□□ -0.59
USP3-203ENST00000538686 TLE4Q04727 773 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 DHRS2Q13268 280 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 ZNF311Q5JNZ3 666 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 GGNBP1Q5YKI7 109 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 ABLIM2Q6H8Q1 611 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 FBXO22Q8NEZ5 403 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 LKAAEAR1Q8TD35 194 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 DCUN1D4Q92564 292 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 ADGRG7Q96K78 797 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 FBXO44Q9H4M3 255 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 PDFQ9HBH1 243 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 SPACA1Q9HBV2 294 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 BPIFA1Q9NP55 256 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 SPHK2Q9NRA0 654 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 ICKQ9UPZ9 632 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 STARD10Q9Y365 291 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 NINQ8N4C6 2090 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 A0A087WUU8 490 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 A0A0B4J2A0 478 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.37□□□□□ -0.59
USP3-203ENST00000538686 CDRT15L2A8MXV6 281 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 SLC16A5O15375 505 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 DNAJB6O75190 326 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 DFFBO76075 338 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 EDNRBP24530 442 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 IGFALSP35858 605 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 MC3RP41968 323 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 RPS23P62266 143 aaKnown RBP11.37□□□□□ -0.59
USP3-203ENST00000538686 ACTA2P62736 377 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 ACTG2P63267 376 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 DLK1P80370 383 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 GXYLT1Q4G148 440 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 STEAP1BQ6NZ63 245 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 MR1Q95460 341 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 SAMD8Q96LT4 415 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 OR2M4Q96R27 311 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 TBX5Q99593 518 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 CHST6Q9GZX3 395 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 GSX1Q9H4S2 264 aaPredicted RBP11.37□□□□□ -0.59
USP3-203ENST00000538686 MYNNQ9NPC7 610 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 OR5V1Q9UGF6 321 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 SHPKQ9UHJ6 478 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 SLC22A14Q9Y267 594 aa11.37□□□□□ -0.59
USP3-203ENST00000538686 MYBPHLA2RUH7 354 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 ANKRD66B4E2M5 251 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 UMAD1C9J7I0 102 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 HSBP1L1C9JCN9 74 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 DCTN6O00399 190 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 KCNQ2O43526 872 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 GUSBP08236 651 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 CLTBP09497 229 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 OR5AC1P0C628 307 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 NDUFV2P19404 249 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 OR1E1P30953 314 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 PPM1AP35813 382 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 LPAR6P43657 344 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 CDKN1BP46527 198 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 MEF2DQ14814 521 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 CDK5R1Q15078 307 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 ZNF697Q5TEC3 545 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 PRPF38BQ5VTL8 546 aaKnown RBP11.36□□□□□ -0.59
USP3-203ENST00000538686 KHDRBS2Q5VWX1 349 aaKnown RBP11.36□□□□□ -0.59
USP3-203ENST00000538686 ZNF585AQ6P3V2 769 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 ZNF620Q6ZNG0 422 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 TMED4Q7Z7H5 227 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 THNSL2Q86YJ6 484 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 RNF175Q8N4F7 328 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 ACOT4Q8N9L9 421 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 CHST13Q8NET6 341 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 DNAJB3Q8WWF6 145 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 MUCL1Q96DR8 90 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 PHB2Q99623 299 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 SRMSQ9H3Y6 488 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 GJD2Q9UKL4 321 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 A0A087WWC5 75 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 A0A087WZY1 265 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 M0R3H8 397 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 GAPDHSO14556 408 aaPredicted RBP11.36□□□□□ -0.59
USP3-203ENST00000538686 PRAMEF4O60810 478 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 PAPLNO95428 1278 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 THEGLP0DJG4 465 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 GZMBP10144 247 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 PCSK1P29120 753 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 PYCR1P32322 319 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 PPICP45877 212 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 XKR4Q5GH76 650 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 PRAMEF9Q5VWM5 478 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 RPL22L1Q6P5R6 122 aaKnown RBP11.36□□□□□ -0.59
USP3-203ENST00000538686 TMEM205Q6UW68 189 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 C5orf24Q7Z6I8 188 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 GRASPQ7Z6J2 395 aaPredicted RBP11.36□□□□□ -0.59
USP3-203ENST00000538686 SYT9Q86SS6 491 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 CPEB3Q8NE35 698 aaKnown RBP11.36□□□□□ -0.59
USP3-203ENST00000538686 OR13C5Q8NGS8 318 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 SPPL3Q8TCT6 385 aa11.36□□□□□ -0.59
USP3-203ENST00000538686 NTNG2Q96CW9 530 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms