RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 TXNDC12O95881 172 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 IL2RAP01589 272 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 YES1P07947 543 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 HOXD4P09016 255 aaPredicted RBP9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 PTGER4P35408 488 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 CDKN2AP42771 156 aaKnown RBP9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ZNF84P51523 738 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 BLVRAP53004 296 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 FHL1Q13642 323 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SLC17A1Q14916 467 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 NXNL2Q5VZ03 156 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 AHSA2Q719I0 299 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 MEPCEQ7L2J0 689 aaKnown RBP9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 CD163Q86VB7 1156 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 CNEP1R1Q8N9A8 125 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 OR6X1Q8NH79 312 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ABHD3Q8WU67 409 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 IPCEF1Q8WWN9 437 aaPredicted RBP9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ASB10Q8WXI3 467 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 NSMAFQ92636 917 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 INTS12Q96CB8 462 aaKnown RBP9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SLC25A44Q96H78 314 aaPredicted RBP9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 MYCBPQ99417 103 aaPredicted RBP9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 TM9SF2Q99805 663 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 CDADC1Q9BWV3 514 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 PRDM14Q9GZV8 571 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SEC61A2Q9H9S3 476 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 CCNB1IP1Q9NPC3 277 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 HINT3Q9NQE9 182 aaKnown RBP9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 GLRX2Q9NS18 164 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 UBAP1Q9NZ09 502 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 WARS2Q9UGM6 360 aaKnown RBP9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SCOCQ9UIL1 159 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SH3BGRL2Q9UJC5 107 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 EMC9Q9Y3B6 208 aa9.5□□□□□ -0.89
TNFRSF1A-211ENST00000538363 FAM208BQ5VWN6 2430 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 A0A1W2PPL8 197 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 NPIPB13A6NJU9 1138 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 EIF4E1BA6NMX2 242 aaKnown RBP9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 FAM171A2A8MVW0 826 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ZNF814B7Z6K7 855 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 NPIPB4C9JG80 1138 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SLC1A7O00341 560 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 AHCYL1O43865 530 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 XPNPEP2O43895 674 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 RAMP1O60894 148 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 FADS2O95864 444 aaKnown RBP9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 IGHMP01871 453 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 GYPBP06028 91 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 TSPAN19P0C672 248 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ZNF823P16415 610 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 MYL12AP19105 171 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 KLK2P20151 261 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 PYCR1P32322 319 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 MTNR1AP48039 350 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 CXCR4P61073 352 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SIRPAP78324 504 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 H3F3AP84243 136 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 GUCA2AQ02747 115 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 TEKQ02763 1124 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 POU4F3Q15319 338 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SMN1Q16637 294 aaKnown RBP9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 MESTQ5EB52 335 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 THEM4Q5T1C6 240 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 C1orf185Q5T7R7 199 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 UGT2A3Q6UWM9 527 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 FAM122BQ7Z309 247 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 BCDIN3DQ7Z5W3 292 aaKnown RBP9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 TUSC5Q8IXB3 177 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 Q8NA96 180 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 TSPAN14Q8NG11 270 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 OR51L1Q8NGJ5 315 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 FAM57AQ8TBR7 257 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 CPT1CQ8TCG5 803 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 RNFT2Q96EX2 444 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 WBP1Q96G27 269 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 MRPL48Q96GC5 212 aaKnown RBP9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 COPS4Q9BT78 406 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ALG12Q9BV10 488 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 RBM24Q9BX46 236 aaKnown RBP9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ULBP2Q9BZM5 246 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SYT4Q9H2B2 425 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 TP63Q9H3D4 680 aaPredicted RBP9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 C12orf49Q9H741 205 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 MOKQ9UQ07 419 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 POLR1DQ9Y2S0 133 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 PCDHGB1Q9Y5G3 927 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ZZEF1O43149 2961 aa9.49□□□□□ -0.89
TNFRSF1A-211ENST00000538363 A0A087WXM4 84 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 TRGV8A0A0C4DH27 118 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SLC22A23A1A5C7 686 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 OR6C68A6NDL8 312 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 OR6C65A6NJZ3 312 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 CENPBD1B2RD01 187 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 KDM4EB2RXH2 506 aaPredicted RBP9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 RGS10O43665 173 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 TRAF3IP2O43734 574 aaPredicted RBP9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 TMCC2O75069 709 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 AQP8O94778 261 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms