RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 TMEM198Q66K66 360 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ANKRD26P1Q6NSI1 321 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 NOXRED1Q6NXP6 359 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ZCCHC12Q6PEW1 402 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 APOOLQ6UXV4 268 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 UTS2BQ765I0 119 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ABHD13Q7L211 337 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 COMMD2Q86X83 199 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SLC22A9Q8IVM8 553 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ZDHHC21Q8IVQ6 265 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 FAM219AQ8IW50 185 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 PHC2Q8IXK0 858 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 RIMKLAQ8IXN7 391 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 C9orf40Q8IXQ3 194 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 BEST3Q8N1M1 668 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CLEC4FQ8N1N0 589 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 PARP16Q8N5Y8 322 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 TRIML2Q8N7C3 387 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 NANOGP1Q8N7R0 232 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ZNF781Q8N8C0 355 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CCDC63Q8NA47 563 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 DRAXINQ8NBI3 349 aaPredicted RBP2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 MDS2Q8NDY4 140 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CSNK2A3Q8NEV1 391 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 OR4N2Q8NGD1 307 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 OR52B4Q8NGK2 314 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CLHC1Q8NHS4 586 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 M1APQ8TC57 530 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 PROX1Q92786 737 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 HAS2Q92819 552 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SNAPC3Q92966 411 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 NCLNQ969V3 563 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CIDECQ96AQ7 238 aaPredicted RBP2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 MCUR1Q96AQ8 359 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 THOC1Q96FV9 657 aaKnown RBP2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 C16orf58Q96GQ5 468 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 MAGED4Q96JG8 741 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 FCRL1Q96LA6 429 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 MUS81Q96NY9 551 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ZNF347Q96SE7 839 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ZNF607Q96SK3 696 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ASCL2Q99929 193 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 TUBA1CQ9BQE3 449 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SIKE1Q9BRV8 207 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 LMF2Q9BU23 707 aaKnown RBP2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 EBPLQ9BY08 206 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 OR8D2Q9GZM6 311 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 LHPPQ9H008 270 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ADNPQ9H2P0 1102 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 PIGMQ9H3S5 423 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 RPF2Q9H7B2 306 aaKnown RBP2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 TRIM45Q9H8W5 580 aaPredicted RBP2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 MEAF6Q9HAF1 191 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CXorf21Q9HAI6 301 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 HHATLQ9HCP6 504 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SLCO1B3Q9NPD5 702 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SLC52A3Q9NQ40 469 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 PRTFDC1Q9NRG1 225 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 GSN-AS1Q9NRJ2 163 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 PNO1Q9NRX1 252 aaKnown RBP2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 GLRX2Q9NS18 164 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 C14orf105Q9NVL8 296 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ASF1BQ9NVP2 202 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SMPD3Q9NY59 655 aaPredicted RBP2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 FLRT3Q9NZU0 649 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 VPS29Q9UBQ0 182 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 NXT1Q9UKK6 140 aaKnown RBP2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CDC14AQ9UNH5 594 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 GPR132Q9UNW8 380 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 OR10H1Q9Y4A9 318 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 MXRA5Q9NR99 2828 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 INTS1Q8N201 2190 aaKnown RBP2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CMYA5Q8N3K9 4069 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 TRAV24A0A0B4J272 114 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 TRBV11-1A0A0K0K1C0 115 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 A0A1W2PPQ1 181 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 TMEM129A0AVI4 362 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 TMEM120BA0PK00 339 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SLC22A23A1A5C7 686 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 WIPF3A6NGB9 483 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 DNAJC9-AS1A6NH13 148 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 C17orf105B2RV13 164 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ZNF879B4DU55 563 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 NPIPA3F8WFD2 350 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 MKRN2OSH3BPM6 223 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 H3BQF6 201 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 UPK1AO00322 258 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SDHDO14521 159 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 RRHO14718 337 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 AZIN1O14977 448 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 RGS16O15492 202 aaPredicted RBP2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 LRRTM2O43300 516 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ZNF208O43345 1280 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SLC28A2O43868 658 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 PCDH7O60245 1069 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SNX3O60493 162 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 GLRA3O75311 464 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 RGS11O94810 467 aa2.28□□□□□ -2.04
TNFRSF1A-210ENST00000537842 GLSO94925 669 aaPredicted RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms