RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 OR13C5Q8NGS8 318 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 FOXN4Q96NZ1 517 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 RAB11FIP5Q9BXF6 653 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 IL17CQ9P0M4 197 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 CXorf51AA0A1B0GTR3 108 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 A0A1B0GWJ7 208 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 MAGEB4O15481 346 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-213ENST00000537002 TAPBPO15533 448 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 CLN5O75503 358 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 PAPLNO95428 1278 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 IGHV2-70P01814 119 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 HMGN2P05204 90 aaKnown RBP4.98□□□□□ -1.61
PTPRD-213ENST00000537002 FPR3P25089 353 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 TAGLN2P37802 199 aaKnown RBP4.98□□□□□ -1.61
PTPRD-213ENST00000537002 OR7A5Q15622 319 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 GPR148Q8TDV2 347 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 P2RY12Q9H244 342 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 CXCL16Q9H2A7 254 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 NCOR1P1Q9H4R4 102 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 NOX4Q9NPH5 578 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 IL26Q9NPH9 171 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-213ENST00000537002 ICKQ9UPZ9 632 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 ANKRD31Q8N7Z5 1873 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 HSPB2A8KAH6 182 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 PLPP2O43688 288 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 NME2P1O60361 137 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 SCAF4O95104 1147 aaKnown RBP4.98□□□□□ -1.61
PTPRD-213ENST00000537002 CFDP00746 253 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-213ENST00000537002 CTSEP14091 401 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 MC3RP41968 323 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 RBP2P50120 134 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 FXYD4P59646 89 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 SPOCK1Q08629 439 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 HSPB2Q16082 182 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 OR52W1Q6IF63 320 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 SCD5Q86SK9 330 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 LINC01465Q8N7H1 131 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 OR13C2Q8NGS9 318 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 PTCHD1Q96NR3 888 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 SPACA1Q9HBV2 294 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 PNO1Q9NRX1 252 aaKnown RBP4.98□□□□□ -1.61
PTPRD-213ENST00000537002 SCN8AQ9UQD0 1980 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 OR6C76A6NM76 312 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 EIF3GO75821 320 aaKnown RBP eCLIP4.97□□□□□ -1.61
PTPRD-213ENST00000537002 CD8AP01732 235 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 AOAHP28039 575 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 RABIFP47224 123 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 PKIAP61925 76 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 PJVKQ0ZLH3 352 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 PNLIPRP3Q17RR3 467 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 SLC36A2Q495M3 483 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 PLPP5Q8NEB5 264 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 OR2AK2Q8NG84 335 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 FAM213BQ8TBF2 198 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 SFXN5Q8TD22 340 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 SLC38A5Q8WUX1 472 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 BPIFA2Q96DR5 249 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 TMEM68Q96MH6 324 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 MACROD1Q9BQ69 325 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF559Q9BR84 538 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 C2orf88Q9BSF0 95 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 OR52A5Q9H2C5 316 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 GAR1Q9NY12 217 aaKnown RBP4.97□□□□□ -1.61
PTPRD-213ENST00000537002 SLC6A14Q9UN76 642 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 TBC1D3DA0A087WVF3 549 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 TBC1D3IA0A087WXS9 549 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 TBC1D3EA0A087X179 549 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 TBC1D3KA0A087X1G2 549 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 TBC1D3FA6NER0 549 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-213ENST00000537002 SEC14L6B5MCN3 397 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 TBC1D3LB9A6J9 549 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 CRYBA1P05813 215 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 ACAA1P09110 424 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-213ENST00000537002 TBC1D3HP0C7X1 549 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 EPHA1P21709 976 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 RIDAP52758 137 aaKnown RBP4.97□□□□□ -1.61
PTPRD-213ENST00000537002 TAS2R60P59551 318 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 SLC25A35Q3KQZ1 300 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 ALG10BQ5I7T1 473 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 TBC1D3GQ6DHY5 549 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 TBC1D3CQ6IPX1 549 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 REC114Q7Z4M0 266 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 LRRTM1Q86UE6 522 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 MISPQ8IVT2 679 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 TBC1D3Q8IZP1 549 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-213ENST00000537002 OR4K17Q8NGC6 315 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 OR5M1Q8NGP8 315 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 CDS1Q92903 461 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 MED16Q9Y2X0 877 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 TMED3Q9Y3Q3 217 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 M0QZK8 103 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 GGCTO75223 188 aaKnown RBP4.97□□□□□ -1.61
PTPRD-213ENST00000537002 ABCD3P28288 659 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 KCNJ3P48549 501 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 SIRPAP78324 504 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 CDK5Q00535 292 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 INSL4Q14641 139 aa4.97□□□□□ -1.61
PTPRD-213ENST00000537002 SMAD2Q15796 467 aaKnown RBP4.97□□□□□ -1.61
PTPRD-213ENST00000537002 EXOSC6Q5RKV6 272 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms