RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 CDC34P49427 236 aaPredicted RBP11.66□□□□□ -0.54
SPG11-203ENST00000535302 TAS2R31P59538 309 aa11.66□□□□□ -0.54
SPG11-203ENST00000535302 SHHQ15465 462 aa11.66□□□□□ -0.54
SPG11-203ENST00000535302 VASH2Q86V25 355 aa11.66□□□□□ -0.54
SPG11-203ENST00000535302 CNTN4Q8IWV2 1026 aa11.66□□□□□ -0.54
SPG11-203ENST00000535302 FAM58AQ8N1B3 248 aa11.66□□□□□ -0.54
SPG11-203ENST00000535302 OR51H1Q8NH63 302 aa11.66□□□□□ -0.54
SPG11-203ENST00000535302 C2CD4CQ8TF44 421 aa11.66□□□□□ -0.54
SPG11-203ENST00000535302 PRRT1Q99946 306 aa11.66□□□□□ -0.54
SPG11-203ENST00000535302 WDR76Q9H967 626 aa11.66□□□□□ -0.54
SPG11-203ENST00000535302 BARX1Q9HBU1 254 aaPredicted RBP11.66□□□□□ -0.54
SPG11-203ENST00000535302 CDHR4A6H8M9 788 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 ABHD16AO95870 558 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 TMEM244Q5VVB8 128 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 CHCHD4Q8N4Q1 142 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 AGBL5Q8NDL9 886 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 THOC3Q96J01 351 aaKnown RBP11.65□□□□□ -0.54
SPG11-203ENST00000535302 ARV1Q9H2C2 271 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 C6orf106Q9H6K1 298 aaPredicted RBP11.65□□□□□ -0.54
SPG11-203ENST00000535302 RAB9BQ9NP90 201 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 CEPT1Q9Y6K0 416 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 SERTM1A2A2V5 107 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 LINC01553A4QN01 128 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 MEGF11A6BM72 1044 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 TMEM235A6NFC5 223 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 METTL15A6NJ78 407 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 A8MVM7 634 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 RPS16P62249 146 aaKnown RBP11.65□□□□□ -0.54
SPG11-203ENST00000535302 PLA1AQ53H76 456 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 PGAP1Q75T13 922 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 LAX1Q8IWV1 398 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 PM20D2Q8IYS1 436 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 DNAJC22Q8N4W6 341 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 ST8SIA2Q92186 375 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 TM4SF18Q96CE8 201 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 RAB3CQ96E17 227 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 CRYBG1Q9Y4K1 1723 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 TMED7-TICAM2A0A0A6YYA0 188 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 PDGFAP04085 211 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 TRHRP34981 398 aaPredicted RBP11.65□□□□□ -0.54
SPG11-203ENST00000535302 NPY4RP50391 375 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 MRPS21P82921 87 aaKnown RBP11.65□□□□□ -0.54
SPG11-203ENST00000535302 THNSL2Q86YJ6 484 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 KHSRPQ92945 711 aaKnown RBP eCLIP11.65□□□□□ -0.542e-6■■■□□ 17.9
SPG11-203ENST00000535302 SLC19A3Q9BZV2 496 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 POFUT1Q9H488 388 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 SSUH2Q9Y2M2 353 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 TMED7Q9Y3B3 224 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 FBXO7Q9Y3I1 522 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 SELENOFO60613 162 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 ITGAMP11215 1152 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 SHC1P29353 583 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 GALEQ14376 348 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 OPN5Q6U736 354 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 OR52H1Q8NGJ2 320 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 SLC41A2Q96JW4 573 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 EMC6Q9BV81 110 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 BOLA1Q9Y3E2 137 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 SERINC4A6NH21 518 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 GAPDHSO14556 408 aaPredicted RBP11.65□□□□□ -0.54
SPG11-203ENST00000535302 RNF224P0DH78 156 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 NOVP48745 357 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 PGFP49763 221 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 UBE2IP63279 158 aaKnown RBP11.65□□□□□ -0.54
SPG11-203ENST00000535302 TATDN3Q17R31 274 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 TMEM179BQ7Z7N9 219 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 RTN4RL1Q86UN2 441 aaPredicted RBP11.65□□□□□ -0.54
SPG11-203ENST00000535302 EDAQ92838 391 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 WBP2Q969T9 261 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 ZNF436Q9C0F3 470 aaPredicted RBP11.65□□□□□ -0.54
SPG11-203ENST00000535302 ASB4Q9Y574 426 aa11.65□□□□□ -0.54
SPG11-203ENST00000535302 FAM221AA4D161 298 aa11.65□□□□□ -0.55
SPG11-203ENST00000535302 SULT1C2O00338 296 aa11.65□□□□□ -0.55
SPG11-203ENST00000535302 TCN2P20062 427 aa11.65□□□□□ -0.55
SPG11-203ENST00000535302 GPR176Q14439 515 aa11.65□□□□□ -0.55
SPG11-203ENST00000535302 SOWAHCQ53LP3 525 aaPredicted RBP11.65□□□□□ -0.55
SPG11-203ENST00000535302 TMEM41BQ5BJD5 291 aa11.65□□□□□ -0.55
SPG11-203ENST00000535302 CPPED1Q9BRF8 314 aaPredicted RBP11.65□□□□□ -0.55
SPG11-203ENST00000535302 NTNG1Q9Y2I2 539 aa11.65□□□□□ -0.55
SPG11-203ENST00000535302 TCRBV3S1A0A5B6 114 aa11.64□□□□□ -0.55
SPG11-203ENST00000535302 AGAP14A8MT82 685 aa11.64□□□□□ -0.55
SPG11-203ENST00000535302 RRASP10301 218 aa11.64□□□□□ -0.55
SPG11-203ENST00000535302 TNFSF8P32971 234 aa11.64□□□□□ -0.55
SPG11-203ENST00000535302 ARL6IP1Q15041 203 aa11.64□□□□□ -0.55
SPG11-203ENST00000535302 DUSP7Q16829 419 aa11.64□□□□□ -0.55
SPG11-203ENST00000535302 FRMPD2BQ6IN97 320 aa11.64□□□□□ -0.55
SPG11-203ENST00000535302 RETREG3Q86VR2 466 aa11.64□□□□□ -0.55
SPG11-203ENST00000535302 OR14A16Q8NHC5 309 aa11.64□□□□□ -0.55
SPG11-203ENST00000535302 UPRTQ96BW1 309 aa11.64□□□□□ -0.55
SPG11-203ENST00000535302 GPR78Q96P69 363 aa11.64□□□□□ -0.55
SPG11-203ENST00000535302 ZNF587Q96SQ5 575 aaPredicted RBP11.64□□□□□ -0.55
SPG11-203ENST00000535302 GLIPR2Q9H4G4 154 aa11.64□□□□□ -0.55
SPG11-203ENST00000535302 HEYLQ9NQ87 328 aaPredicted RBP11.64□□□□□ -0.55
SPG11-203ENST00000535302 CGGBP1Q9UFW8 167 aaPredicted RBP11.64□□□□□ -0.55
SPG11-203ENST00000535302 MRPS28Q9Y2Q9 187 aaKnown RBP11.64□□□□□ -0.55
SPG11-203ENST00000535302 ANKRD61A6NGH8 418 aa11.64□□□□□ -0.55
SPG11-203ENST00000535302 SLC22A25Q6T423 547 aa11.64□□□□□ -0.55
SPG11-203ENST00000535302 ZBED3Q96IU2 234 aaPredicted RBP11.64□□□□□ -0.55
SPG11-203ENST00000535302 FGF21Q9NSA1 209 aa11.64□□□□□ -0.55
SPG11-203ENST00000535302 PIGLQ9Y2B2 252 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms