RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 NEBLO76041 1014 aa4.43□□□□□ -1.7
CASP4-213ENST00000534356 STSP08842 583 aa4.43□□□□□ -1.7
CASP4-213ENST00000534356 TNNI1P19237 187 aa4.43□□□□□ -1.7
CASP4-213ENST00000534356 ATP5A1P25705 553 aaKnown RBP4.43□□□□□ -1.7
CASP4-213ENST00000534356 ATP5C1P36542 298 aaKnown RBP4.43□□□□□ -1.7
CASP4-213ENST00000534356 BPIFB3P59826 476 aa4.43□□□□□ -1.7
CASP4-213ENST00000534356 RGS1Q08116 209 aa4.43□□□□□ -1.7
CASP4-213ENST00000534356 CLEC20AQ6ZU45 233 aa4.43□□□□□ -1.7
CASP4-213ENST00000534356 FRA10AC1Q70Z53 315 aa4.43□□□□□ -1.7
CASP4-213ENST00000534356 CENPUQ71F23 418 aa4.43□□□□□ -1.7
CASP4-213ENST00000534356 NELFCDQ8IXH7 590 aa4.43□□□□□ -1.7
CASP4-213ENST00000534356 DDI1Q8WTU0 396 aa4.43□□□□□ -1.7
CASP4-213ENST00000534356 SDSLQ96GA7 329 aa4.43□□□□□ -1.7
CASP4-213ENST00000534356 ANKRD36BP1Q96IX9 119 aa4.43□□□□□ -1.7
CASP4-213ENST00000534356 EHD1Q9H4M9 534 aa4.43□□□□□ -1.7
CASP4-213ENST00000534356 ASCL3Q9NQ33 180 aa4.43□□□□□ -1.7
CASP4-213ENST00000534356 ANAPC11Q9NYG5 84 aa4.43□□□□□ -1.7
CASP4-213ENST00000534356 SCML2Q9UQR0 700 aa4.43□□□□□ -1.7
CASP4-213ENST00000534356 KIF3AQ9Y496 699 aa4.43□□□□□ -1.7
CASP4-213ENST00000534356 U3KQA8 63 aa4.43□□□□□ -1.7
CASP4-213ENST00000534356 ZNF233A6NK53 670 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 LAD1O00515 517 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 HBQ1P09105 142 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 CPN1P15169 458 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 MAGEA5P43359 124 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 BDKRB1P46663 353 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 RPL29P47914 159 aaKnown RBP4.42□□□□□ -1.7
CASP4-213ENST00000534356 C21orf59P57076 290 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 TNNC1P63316 161 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 BDH1Q02338 343 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 CYP24A1Q07973 514 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 DOPEY1Q5JWR5 2465 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 C1orf220Q5T0J3 134 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 C9orf64Q5T6V5 341 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 METTL11BQ5VVY1 283 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 ARSKQ6UWY0 536 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 ANKRD37Q7Z713 158 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 MMAAQ8IVH4 418 aaKnown RBP4.42□□□□□ -1.7
CASP4-213ENST00000534356 STK40Q8N2I9 435 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 OR10H4Q8NGA5 316 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 OR2A12Q8NGT7 310 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 IL1F10Q8WWZ1 152 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 MED8Q96G25 268 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 SLC30A2Q9BRI3 323 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 LLPHQ9BRT6 129 aaKnown RBP4.42□□□□□ -1.7
CASP4-213ENST00000534356 TRPM6Q9BX84 2022 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 MRPL13Q9BYD1 178 aaKnown RBP4.42□□□□□ -1.7
CASP4-213ENST00000534356 ISG20L2Q9H9L3 353 aaKnown RBP4.42□□□□□ -1.7
CASP4-213ENST00000534356 CSNK1G1Q9HCP0 422 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 DMAP1Q9NPF5 467 aaPredicted RBP4.42□□□□□ -1.7
CASP4-213ENST00000534356 PAK1IP1Q9NWT1 392 aaPredicted RBP4.42□□□□□ -1.7
CASP4-213ENST00000534356 FBXL12Q9NXK8 326 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 MRPL39Q9NYK5 338 aaKnown RBP4.42□□□□□ -1.7
CASP4-213ENST00000534356 OR1A1Q9P1Q5 309 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 NYNRINQ9P2P1 1898 aaKnown RBP4.42□□□□□ -1.7
CASP4-213ENST00000534356 XPO7Q9UIA9 1087 aaKnown RBP4.42□□□□□ -1.7
CASP4-213ENST00000534356 ANAPC7Q9UJX3 599 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 CENPEQ02224 2701 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 SCN8AQ9UQD0 1980 aa4.42□□□□□ -1.7
CASP4-213ENST00000534356 MED13Q9UHV7 2174 aa4.41□□□□□ -1.7
CASP4-213ENST00000534356 LRRK1Q38SD2 2015 aa4.41□□□□□ -1.7
CASP4-213ENST00000534356 LRRIQ3A6PVS8 624 aaPredicted RBP4.41□□□□□ -1.7
CASP4-213ENST00000534356 TBL1XO60907 577 aa4.41□□□□□ -1.7
CASP4-213ENST00000534356 MBD3O95983 291 aa4.41□□□□□ -1.7
CASP4-213ENST00000534356 ELK1P19419 428 aa4.41□□□□□ -1.7
CASP4-213ENST00000534356 VDAC1P21796 283 aa4.41□□□□□ -1.7
CASP4-213ENST00000534356 PSMD8P48556 350 aa4.41□□□□□ -1.7
CASP4-213ENST00000534356 KRTAP12-2P59991 146 aa4.41□□□□□ -1.7
CASP4-213ENST00000534356 OTUD4Q01804 1114 aaKnown RBP4.41□□□□□ -1.7
CASP4-213ENST00000534356 OC90Q02509 493 aaPredicted RBP4.41□□□□□ -1.7
CASP4-213ENST00000534356 SNRNP35Q16560 246 aaKnown RBP4.41□□□□□ -1.7
CASP4-213ENST00000534356 TPRG1LQ5T0D9 272 aa4.41□□□□□ -1.7
CASP4-213ENST00000534356 LRRC8BQ6P9F7 803 aa4.41□□□□□ -1.7
CASP4-213ENST00000534356 LINC01561Q8N1V8 128 aa4.41□□□□□ -1.7
CASP4-213ENST00000534356 OR2L5Q8NG80 312 aa4.41□□□□□ -1.7
CASP4-213ENST00000534356 NANPQ8TBE9 248 aa4.41□□□□□ -1.7
CASP4-213ENST00000534356 SMARCD1Q96GM5 515 aa4.41□□□□□ -1.7
CASP4-213ENST00000534356 PKNOX2Q96KN3 472 aa4.41□□□□□ -1.7
CASP4-213ENST00000534356 IL4I1Q96RQ9 567 aa4.41□□□□□ -1.7
CASP4-213ENST00000534356 ZNF184Q99676 751 aaPredicted RBP4.41□□□□□ -1.7
CASP4-213ENST00000534356 GSDMCQ9BYG8 508 aa4.41□□□□□ -1.7
CASP4-213ENST00000534356 BLZF1Q9H2G9 400 aa4.41□□□□□ -1.7
CASP4-213ENST00000534356 AGPAT3Q9NRZ7 376 aa4.41□□□□□ -1.7
CASP4-213ENST00000534356 RIMS3Q9UJD0 308 aa4.41□□□□□ -1.7
CASP4-213ENST00000534356 ANKRD17O75179 2603 aaKnown RBP4.4□□□□□ -1.7
CASP4-213ENST00000534356 FAM231BA6NCW3 169 aa4.4□□□□□ -1.71
CASP4-213ENST00000534356 OR6C65A6NJZ3 312 aa4.4□□□□□ -1.71
CASP4-213ENST00000534356 B4DXG7 233 aa4.4□□□□□ -1.71
CASP4-213ENST00000534356 STX7O15400 261 aaKnown RBP4.4□□□□□ -1.71
CASP4-213ENST00000534356 SLC31A1O15431 190 aa4.4□□□□□ -1.71
CASP4-213ENST00000534356 DRD3P35462 400 aa4.4□□□□□ -1.71
CASP4-213ENST00000534356 LONP1P36776 959 aaKnown RBP4.4□□□□□ -1.71
CASP4-213ENST00000534356 CSKP41240 450 aa4.4□□□□□ -1.71
CASP4-213ENST00000534356 EFNA3P52797 238 aa4.4□□□□□ -1.71
CASP4-213ENST00000534356 RPS24P62847 133 aaKnown RBP4.4□□□□□ -1.71
CASP4-213ENST00000534356 SCGB2A2Q13296 93 aa4.4□□□□□ -1.71
CASP4-213ENST00000534356 ATXN7L3Q14CW9 347 aaPredicted RBP4.4□□□□□ -1.71
CASP4-213ENST00000534356 CST6Q15828 149 aa4.4□□□□□ -1.71
CASP4-213ENST00000534356 SPATA46Q5T0L3 261 aa4.4□□□□□ -1.71
CASP4-213ENST00000534356 ASPHD2Q6ICH7 369 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms