RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 IFT27Q9BW83 186 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 HDHD5Q9BXW7 423 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 GABARAPL3Q9BY60 117 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 ENKD1Q9H0I2 346 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 OPN3Q9H1Y3 402 aaPredicted RBP13.77□□□□□ -0.21
CTTN-215ENST00000533931 SLC25A19Q9HC21 320 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 TBC1D23Q9NUY8 699 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 ASB6Q9NWX5 421 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 UPB1Q9UBR1 384 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 TMEFF2Q9UIK5 374 aaPredicted RBP13.77□□□□□ -0.21
CTTN-215ENST00000533931 ORC6Q9Y5N6 252 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 GCN1Q92616 2671 aaKnown RBP13.77□□□□□ -0.21
CTTN-215ENST00000533931 LRRK2Q5S007 2527 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 MED12LQ86YW9 2145 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 ZNF587BE7ETH6 402 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 H3BN98 237 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 XKRYO14609 159 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 EI24O14681 340 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 GRK5P34947 590 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 CD79BP40259 229 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 CSNK1A1P48729 337 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 RAD23AP54725 363 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 ERVK-25P63136 954 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 TGFBR3Q03167 851 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 SLC34A1Q06495 639 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 TFF3Q07654 80 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 ITGADQ13349 1161 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 SLC27A4Q6P1M0 643 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 ZBTB49Q6ZSB9 765 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 IGFN1Q86VF2 1251 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 CBR4Q8N4T8 237 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 C1orf162Q8NEQ5 155 aaPredicted RBP13.76□□□□□ -0.21
CTTN-215ENST00000533931 EMC6Q9BV81 110 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 RBM24Q9BX46 236 aaKnown RBP13.76□□□□□ -0.21
CTTN-215ENST00000533931 TSSK6Q9BXA6 273 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 TEX12Q9BXU0 123 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 PLA2G12AQ9BZM1 189 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 SLC7A10Q9NS82 523 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 TAS2R16Q9NYV7 291 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 PRSS50Q9UI38 385 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 GPR52Q9Y2T5 361 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 RRP15Q9Y3B9 282 aaKnown RBP13.76□□□□□ -0.21
CTTN-215ENST00000533931 ADAM18Q9Y3Q7 739 aa13.76□□□□□ -0.21
CTTN-215ENST00000533931 FAM90A27PA6NNH2 459 aa13.75□□□□□ -0.21
CTTN-215ENST00000533931 TRMUO75648 421 aaKnown RBP13.75□□□□□ -0.21
CTTN-215ENST00000533931 KRT33AO76009 404 aa13.75□□□□□ -0.21
CTTN-215ENST00000533931 SOX14O95416 240 aa13.75□□□□□ -0.21
CTTN-215ENST00000533931 PPP1R3DO95685 299 aa13.75□□□□□ -0.21
CTTN-215ENST00000533931 EDNRAP25101 427 aa13.75□□□□□ -0.21
CTTN-215ENST00000533931 MPGP29372 298 aa13.75□□□□□ -0.21
CTTN-215ENST00000533931 ACVR1BP36896 505 aa13.75□□□□□ -0.21
CTTN-215ENST00000533931 GIPRP48546 466 aa13.75□□□□□ -0.21
CTTN-215ENST00000533931 CRISP1P54107 249 aa13.75□□□□□ -0.21
CTTN-215ENST00000533931 CLRN1P58418 232 aa13.75□□□□□ -0.21
CTTN-215ENST00000533931 TOP3AQ13472 1001 aaPredicted RBP13.75□□□□□ -0.21
CTTN-215ENST00000533931 KRR1Q13601 381 aaKnown RBP13.75□□□□□ -0.21
CTTN-215ENST00000533931 MELKQ14680 651 aa13.75□□□□□ -0.21
CTTN-215ENST00000533931 TRIP10Q15642 601 aa13.75□□□□□ -0.21
CTTN-215ENST00000533931 PGGHGQ32M88 737 aa13.75□□□□□ -0.21
CTTN-215ENST00000533931 NRN1LQ496H8 165 aa13.75□□□□□ -0.21
CTTN-215ENST00000533931 THEM4Q5T1C6 240 aa13.75□□□□□ -0.21
CTTN-215ENST00000533931 ZNF627Q7L945 461 aa13.75□□□□□ -0.21
CTTN-215ENST00000533931 LUZP2Q86TE4 346 aa13.75□□□□□ -0.21
CTTN-215ENST00000533931 UBE2J2Q8N2K1 259 aa13.75□□□□□ -0.21
CTTN-215ENST00000533931 OR6N1Q8NGY5 312 aa13.75□□□□□ -0.21
CTTN-215ENST00000533931 NMD3Q96D46 503 aaKnown RBP13.75□□□□□ -0.21
CTTN-215ENST00000533931 Q96M85 177 aa13.75□□□□□ -0.21
CTTN-215ENST00000533931 ERMAPQ96PL5 475 aaPredicted RBP13.75□□□□□ -0.21
CTTN-215ENST00000533931 PRRG3Q9BZD7 231 aa13.75□□□□□ -0.21
CTTN-215ENST00000533931 GALNT8Q9NY28 637 aa13.75□□□□□ -0.21
CTTN-215ENST00000533931 GLTPQ9NZD2 209 aa13.75□□□□□ -0.21
CTTN-215ENST00000533931 VSX1Q9NZR4 365 aaPredicted RBP13.75□□□□□ -0.21
CTTN-215ENST00000533931 IL20RAQ9UHF4 553 aa13.75□□□□□ -0.21
CTTN-215ENST00000533931 IER3IP1Q9Y5U9 82 aa13.75□□□□□ -0.21
CTTN-215ENST00000533931 TEX13CA0A0J9YWL9 993 aa13.74□□□□□ -0.21
CTTN-215ENST00000533931 PRSS37A4D1T9 235 aa13.74□□□□□ -0.21
CTTN-215ENST00000533931 UPK3AO75631 287 aa13.74□□□□□ -0.21
CTTN-215ENST00000533931 IFNGP01579 166 aa13.74□□□□□ -0.21
CTTN-215ENST00000533931 HMGN1P05114 100 aa13.74□□□□□ -0.21
CTTN-215ENST00000533931 PPP3CBP16298 524 aa13.74□□□□□ -0.21
CTTN-215ENST00000533931 PAX7P23759 505 aa13.74□□□□□ -0.21
CTTN-215ENST00000533931 NOS3P29474 1203 aa13.74□□□□□ -0.21
CTTN-215ENST00000533931 CDK5Q00535 292 aa13.74□□□□□ -0.21
CTTN-215ENST00000533931 CAMK2DQ13557 499 aa13.74□□□□□ -0.21
CTTN-215ENST00000533931 CDSNQ15517 529 aa13.74□□□□□ -0.21
CTTN-215ENST00000533931 MESTQ5EB52 335 aa13.74□□□□□ -0.21
CTTN-215ENST00000533931 C10orf128Q5T292 105 aa13.74□□□□□ -0.21
CTTN-215ENST00000533931 OGFRL1Q5TC84 451 aaPredicted RBP13.74□□□□□ -0.21
CTTN-215ENST00000533931 OR7E24Q6IFN5 339 aa13.74□□□□□ -0.21
CTTN-215ENST00000533931 C17orf78Q8N4C9 275 aa13.74□□□□□ -0.21
CTTN-215ENST00000533931 STEAP2Q8NFT2 490 aa13.74□□□□□ -0.21
CTTN-215ENST00000533931 HDAC2Q92769 488 aaKnown RBP13.74□□□□□ -0.21
CTTN-215ENST00000533931 RBP7Q96R05 134 aa13.74□□□□□ -0.21
CTTN-215ENST00000533931 ULBP2Q9BZM5 246 aa13.74□□□□□ -0.21
CTTN-215ENST00000533931 SLC24A3Q9HC58 644 aa13.74□□□□□ -0.21
CTTN-215ENST00000533931 KLHL21Q9UJP4 597 aa13.74□□□□□ -0.21
CTTN-215ENST00000533931 SOCS2O14508 198 aa13.73□□□□□ -0.21
CTTN-215ENST00000533931 HOXB1P14653 301 aaPredicted RBP13.73□□□□□ -0.21
CTTN-215ENST00000533931 MYBPC1Q00872 1141 aa13.73□□□□□ -0.21
CTTN-215ENST00000533931 ROR2Q01974 943 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms