RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 SNTB2Q13425 540 aaKnown RBP13.37□□□□□ -0.27
CPSF1-211ENST00000533492 GGTLC2Q14390 218 aa13.37□□□□□ -0.27
CPSF1-211ENST00000533492 CYB5R2Q6BCY4 276 aa13.37□□□□□ -0.27
CPSF1-211ENST00000533492 KRT80Q6KB66 452 aa13.37□□□□□ -0.27
CPSF1-211ENST00000533492 DEF8Q6ZN54 512 aa13.37□□□□□ -0.27
CPSF1-211ENST00000533492 PIWIL3Q7Z3Z3 882 aaKnown RBP13.37□□□□□ -0.27
CPSF1-211ENST00000533492 NANOGNBQ7Z5D8 188 aa13.37□□□□□ -0.27
CPSF1-211ENST00000533492 TSPYL5Q86VY4 417 aaPredicted RBP13.37□□□□□ -0.27
CPSF1-211ENST00000533492 HIPK1Q86Z02 1210 aa13.37□□□□□ -0.27
CPSF1-211ENST00000533492 WDFY1Q8IWB7 410 aa13.37□□□□□ -0.27
CPSF1-211ENST00000533492 SVOPLQ8N434 492 aa13.37□□□□□ -0.27
CPSF1-211ENST00000533492 C10orf82Q8WW14 230 aa13.37□□□□□ -0.27
CPSF1-211ENST00000533492 SLC25A44Q96H78 314 aaPredicted RBP13.37□□□□□ -0.27
CPSF1-211ENST00000533492 ZNF426Q9BUY5 554 aa13.37□□□□□ -0.27
CPSF1-211ENST00000533492 DENND2DQ9H6A0 471 aaPredicted RBP13.37□□□□□ -0.27
CPSF1-211ENST00000533492 NOX3Q9HBY0 568 aa13.37□□□□□ -0.27
CPSF1-211ENST00000533492 CMAHPQ9Y471 501 aa13.37□□□□□ -0.27
CPSF1-211ENST00000533492 LOC390937A0A1W2PQ73 354 aa13.36□□□□□ -0.27
CPSF1-211ENST00000533492 UBL3O95164 117 aa13.36□□□□□ -0.27
CPSF1-211ENST00000533492 MT-ND1P03886 318 aa13.36□□□□□ -0.27
CPSF1-211ENST00000533492 ASAH2BP0C7U1 165 aa13.36□□□□□ -0.27
CPSF1-211ENST00000533492 TNFRSF1BP20333 461 aa13.36□□□□□ -0.27
CPSF1-211ENST00000533492 NR4A1P22736 598 aa13.36□□□□□ -0.27
CPSF1-211ENST00000533492 GIPRP48546 466 aa13.36□□□□□ -0.27
CPSF1-211ENST00000533492 MELKQ14680 651 aa13.36□□□□□ -0.27
CPSF1-211ENST00000533492 CHRFAM7AQ494W8 412 aa13.36□□□□□ -0.27
CPSF1-211ENST00000533492 IQCCQ4KMZ1 466 aa13.36□□□□□ -0.27
CPSF1-211ENST00000533492 HSP90B2PQ58FF3 399 aa13.36□□□□□ -0.27
CPSF1-211ENST00000533492 C6orf52Q5T4I8 152 aa13.36□□□□□ -0.27
CPSF1-211ENST00000533492 ZNF540Q8NDQ6 660 aa13.36□□□□□ -0.27
CPSF1-211ENST00000533492 TMEM54Q969K7 222 aa13.36□□□□□ -0.27
CPSF1-211ENST00000533492 MS4A3Q96HJ5 214 aa13.36□□□□□ -0.27
CPSF1-211ENST00000533492 ZNF583Q96ND8 569 aa13.36□□□□□ -0.27
CPSF1-211ENST00000533492 FOXN4Q96NZ1 517 aa13.36□□□□□ -0.27
CPSF1-211ENST00000533492 KCNK17Q96T54 332 aa13.36□□□□□ -0.27
CPSF1-211ENST00000533492 DOK1Q99704 481 aa13.36□□□□□ -0.27
CPSF1-211ENST00000533492 PRSS27Q9BQR3 290 aa13.36□□□□□ -0.27
CPSF1-211ENST00000533492 POLR2J2Q9GZM3 115 aaKnown RBP13.36□□□□□ -0.27
CPSF1-211ENST00000533492 POLR2J3Q9H1A7 115 aaKnown RBP13.36□□□□□ -0.27
CPSF1-211ENST00000533492 DYNLRB1Q9NP97 96 aa13.36□□□□□ -0.27
CPSF1-211ENST00000533492 MEPEQ9NQ76 525 aaPredicted RBP13.36□□□□□ -0.27
CPSF1-211ENST00000533492 RIMS3Q9UJD0 308 aa13.36□□□□□ -0.27
CPSF1-211ENST00000533492 FBXL3Q9UKT7 428 aa13.36□□□□□ -0.27
CPSF1-211ENST00000533492 CAPN7Q9Y6W3 813 aa13.36□□□□□ -0.27
CPSF1-211ENST00000533492 YLPM1P49750 1951 aaKnown RBP13.36□□□□□ -0.27
CPSF1-211ENST00000533492 RTTNQ86VV8 2226 aa13.35□□□□□ -0.27
CPSF1-211ENST00000533492 A0A1W2PRG6 482 aa13.35□□□□□ -0.27
CPSF1-211ENST00000533492 MCIDASD6RGH6 385 aa13.35□□□□□ -0.27
CPSF1-211ENST00000533492 SHOX2O60902 331 aaPredicted RBP13.35□□□□□ -0.27
CPSF1-211ENST00000533492 OR5F1O95221 314 aa13.35□□□□□ -0.27
CPSF1-211ENST00000533492 FARS2O95363 451 aaKnown RBP13.35□□□□□ -0.27
CPSF1-211ENST00000533492 IFNA2P01563 188 aa13.35□□□□□ -0.27
CPSF1-211ENST00000533492 OR8G3PP0DMU2 310 aa13.35□□□□□ -0.27
CPSF1-211ENST00000533492 FUT1P19526 365 aa13.35□□□□□ -0.27
CPSF1-211ENST00000533492 IFNA8P32881 189 aa13.35□□□□□ -0.27
CPSF1-211ENST00000533492 LSP1P33241 339 aa13.35□□□□□ -0.27
CPSF1-211ENST00000533492 RBM34P42696 430 aaKnown RBP13.35□□□□□ -0.27
CPSF1-211ENST00000533492 NR4A2P43354 598 aa13.35□□□□□ -0.27
CPSF1-211ENST00000533492 OR1E2P47887 323 aa13.35□□□□□ -0.27
CPSF1-211ENST00000533492 CLRN1P58418 232 aa13.35□□□□□ -0.27
CPSF1-211ENST00000533492 GALK2Q01415 458 aa13.35□□□□□ -0.27
CPSF1-211ENST00000533492 GUCY1A3Q02108 690 aa13.35□□□□□ -0.27
CPSF1-211ENST00000533492 PIN1Q13526 163 aaPredicted RBP13.35□□□□□ -0.27
CPSF1-211ENST00000533492 LRRC23Q53EV4 343 aaPredicted RBP13.35□□□□□ -0.27
CPSF1-211ENST00000533492 CYBRD1Q53TN4 286 aa13.35□□□□□ -0.27
CPSF1-211ENST00000533492 GKAP1Q5VSY0 366 aaPredicted RBP13.35□□□□□ -0.27
CPSF1-211ENST00000533492 CGB2Q6NT52 195 aa13.35□□□□□ -0.27
CPSF1-211ENST00000533492 NKAIN4Q8IVV8 208 aa13.35□□□□□ -0.27
CPSF1-211ENST00000533492 SKA3Q8IX90 412 aa13.35□□□□□ -0.27
CPSF1-211ENST00000533492 SLC22A24Q8N4F4 322 aa13.35□□□□□ -0.27
CPSF1-211ENST00000533492 OR2T12Q8NG77 320 aa13.35□□□□□ -0.27
CPSF1-211ENST00000533492 TMEM239Q8WW34 195 aa13.35□□□□□ -0.27
CPSF1-211ENST00000533492 NEU4Q8WWR8 484 aaPredicted RBP13.35□□□□□ -0.27
CPSF1-211ENST00000533492 SGTBQ96EQ0 304 aa13.35□□□□□ -0.27
CPSF1-211ENST00000533492 TMEM129A0AVI4 362 aa13.34□□□□□ -0.27
CPSF1-211ENST00000533492 FAM220BPB1ANY3 271 aa13.34□□□□□ -0.27
CPSF1-211ENST00000533492 DHHO43323 396 aa13.34□□□□□ -0.27
CPSF1-211ENST00000533492 IGHG1P01857 330 aa13.34□□□□□ -0.27
CPSF1-211ENST00000533492 QDPRP09417 244 aa13.34□□□□□ -0.27
CPSF1-211ENST00000533492 PATE4P0C8F1 98 aa13.34□□□□□ -0.27
CPSF1-211ENST00000533492 ZNF35P13682 527 aa13.34□□□□□ -0.27
CPSF1-211ENST00000533492 ZNF14P17017 642 aaPredicted RBP13.34□□□□□ -0.27
CPSF1-211ENST00000533492 KDELR2P33947 212 aa13.34□□□□□ -0.27
CPSF1-211ENST00000533492 GZMKP49863 264 aa13.34□□□□□ -0.27
CPSF1-211ENST00000533492 UGT2B15P54855 530 aa13.34□□□□□ -0.27
CPSF1-211ENST00000533492 RAB39AQ14964 217 aa13.34□□□□□ -0.27
CPSF1-211ENST00000533492 PODNL1Q6PEZ8 512 aa13.34□□□□□ -0.27
CPSF1-211ENST00000533492 LRFN4Q6PJG9 635 aa13.34□□□□□ -0.27
CPSF1-211ENST00000533492 ZCCHC24Q8N2G6 241 aaKnown RBP13.34□□□□□ -0.27
CPSF1-211ENST00000533492 PFN4Q8NHR9 129 aa13.34□□□□□ -0.27
CPSF1-211ENST00000533492 TMEM255BQ8WV15 326 aa13.34□□□□□ -0.27
CPSF1-211ENST00000533492 LZICQ8WZA0 190 aa13.34□□□□□ -0.27
CPSF1-211ENST00000533492 TPD52L3Q96J77 140 aa13.34□□□□□ -0.27
CPSF1-211ENST00000533492 ZNF75AQ96N20 296 aa13.34□□□□□ -0.27
CPSF1-211ENST00000533492 MDFIQ99750 246 aa13.34□□□□□ -0.27
CPSF1-211ENST00000533492 RNF121Q9H920 327 aa13.34□□□□□ -0.27
CPSF1-211ENST00000533492 TMEM38BQ9NVV0 291 aa13.34□□□□□ -0.27
CPSF1-211ENST00000533492 ZNF224Q9NZL3 707 aa13.34□□□□□ -0.27
CPSF1-211ENST00000533492 AP3M1Q9Y2T2 418 aa13.34□□□□□ -0.27
CPSF1-211ENST00000533492 MED31Q9Y3C7 131 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms