RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 NDUFB2O95178 105 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 IGHG1P01857 330 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 HRGP04196 525 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 CD14P08571 375 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 IFNGR2P38484 337 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 IST1P53990 364 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 SH3BGRP55822 239 aaPredicted RBP10.51□□□□□ -0.73
SSBP3-214ENST00000533209 KRTAP10-9P60411 292 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 ERVK-25P63136 954 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 ARF1P84077 181 aaKnown RBP10.51□□□□□ -0.73
SSBP3-214ENST00000533209 TSPAN31Q12999 210 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 TOP3AQ13472 1001 aaPredicted RBP10.51□□□□□ -0.73
SSBP3-214ENST00000533209 PPA1Q15181 289 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 HIST3H3Q16695 136 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 MICAQ29983 383 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 TBRG1Q3YBR2 411 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 HIKESHIQ53FT3 197 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 ALKBH2Q6NS38 261 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 LRFN4Q6PJG9 635 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 THSD4Q6ZMP0 1018 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 HDDC2Q7Z4H3 204 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 TMEM179BQ7Z7N9 219 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 C17orf78Q8N4C9 275 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 NOXO1Q8NFA2 376 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 OR52N5Q8NH56 324 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 ZNF519Q8TB69 540 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 HDAC2Q92769 488 aaKnown RBP10.51□□□□□ -0.73
SSBP3-214ENST00000533209 DUS3LQ96G46 650 aaKnown RBP10.51□□□□□ -0.73
SSBP3-214ENST00000533209 TSPAN32Q96QS1 320 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 GPX7Q96SL4 187 aaPredicted RBP10.51□□□□□ -0.73
SSBP3-214ENST00000533209 KATNB1Q9BVA0 655 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 POLDIP3Q9BY77 421 aaKnown RBP10.51□□□□□ -0.73
SSBP3-214ENST00000533209 ULBP2Q9BZM5 246 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 NELFAQ9H3P2 528 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 YY1AP1Q9H869 796 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 B3GAT2Q9NPZ5 323 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 IL20RAQ9UHF4 553 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 SLC25A15Q9Y619 301 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 ABCA4P78363 2273 aa10.51□□□□□ -0.73
SSBP3-214ENST00000533209 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.5□□□□□ -0.73
SSBP3-214ENST00000533209 A0A1W2PPR1 153 aa10.5□□□□□ -0.73
SSBP3-214ENST00000533209 ZNF99A8MXY4 864 aaPredicted RBP10.5□□□□□ -0.73
SSBP3-214ENST00000533209 TIPRLO75663 272 aa10.5□□□□□ -0.73
SSBP3-214ENST00000533209 GASTP01350 101 aa10.5□□□□□ -0.73
SSBP3-214ENST00000533209 ACADSP16219 412 aa10.5□□□□□ -0.73
SSBP3-214ENST00000533209 RPL4P36578 427 aaKnown RBP10.5□□□□□ -0.73
SSBP3-214ENST00000533209 ACVR1BP36896 505 aa10.5□□□□□ -0.73
SSBP3-214ENST00000533209 CLRN1P58418 232 aa10.5□□□□□ -0.73
SSBP3-214ENST00000533209 GK3PQ14409 553 aa10.5□□□□□ -0.73
SSBP3-214ENST00000533209 ANKRD16Q6P6B7 361 aa10.5□□□□□ -0.73
SSBP3-214ENST00000533209 SMARCD3Q6STE5 483 aa10.5□□□□□ -0.73
SSBP3-214ENST00000533209 ZNF627Q7L945 461 aa10.5□□□□□ -0.73
SSBP3-214ENST00000533209 FAM122BQ7Z309 247 aa10.5□□□□□ -0.73
SSBP3-214ENST00000533209 YTHDF3Q7Z739 585 aaKnown RBP10.5□□□□□ -0.73
SSBP3-214ENST00000533209 TMEM200AQ86VY9 491 aa10.5□□□□□ -0.73
SSBP3-214ENST00000533209 SYT14Q8NB59 555 aa10.5□□□□□ -0.73
SSBP3-214ENST00000533209 FANK1Q8TC84 345 aa10.5□□□□□ -0.73
SSBP3-214ENST00000533209 MAGEE2Q8TD90 523 aaPredicted RBP10.5□□□□□ -0.73
SSBP3-214ENST00000533209 NMD3Q96D46 503 aaKnown RBP10.5□□□□□ -0.73
SSBP3-214ENST00000533209 MUCL1Q96DR8 90 aa10.5□□□□□ -0.73
SSBP3-214ENST00000533209 PIK3IP1Q96FE7 263 aa10.5□□□□□ -0.73
SSBP3-214ENST00000533209 KCNK17Q96T54 332 aa10.5□□□□□ -0.73
SSBP3-214ENST00000533209 OR52D1Q9H346 318 aa10.5□□□□□ -0.73
SSBP3-214ENST00000533209 NRIP3Q9NQ35 241 aa10.5□□□□□ -0.73
SSBP3-214ENST00000533209 NPAP1Q9NZP6 1156 aa10.5□□□□□ -0.73
SSBP3-214ENST00000533209 STX18Q9P2W9 335 aaKnown RBP10.5□□□□□ -0.73
SSBP3-214ENST00000533209 DNAJB9Q9UBS3 223 aa10.5□□□□□ -0.73
SSBP3-214ENST00000533209 ADAM18Q9Y3Q7 739 aa10.5□□□□□ -0.73
SSBP3-214ENST00000533209 LRBAP50851 2863 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 POLQO75417 2590 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 A0A096LPE4 126 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 A0A1W2PPZ6 126 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 A6NIZ1 184 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 GNGT2O14610 69 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 DHHO43323 396 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 SEC14L2O76054 403 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 QDPRP09417 244 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 ZNF133P52736 654 aaPredicted RBP10.49□□□□□ -0.73
SSBP3-214ENST00000533209 RAP1BP61224 184 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 RAP1AP62834 184 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 MYBPC1Q00872 1141 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 RFX4Q33E94 735 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 MESTQ5EB52 335 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 BEX5Q5H9J7 111 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 FAM205BPQ63HN1 556 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 DPY19L2P2Q6ZN68 376 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 ZNF620Q6ZNG0 422 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 SSX8Q7RTT4 187 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 ARIH2OSQ8N7S6 290 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 AQP11Q8NBQ7 271 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 OR10G2Q8NGC3 310 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 GIPC3Q8TF64 312 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 MCHR2Q969V1 340 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 PLPPR2Q96GM1 343 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 Q96M85 177 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 HS3ST6Q96QI5 342 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 FOXB1Q99853 325 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 ALG12Q9BV10 488 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 DGCR6LQ9BY27 220 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 NDEL1Q9GZM8 345 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms