RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 FAM69AQ5T7M9 428 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 SLC6A19Q695T7 634 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 FAM122BQ7Z309 247 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 TMEM99Q8N816 258 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 OR5B2Q96R09 309 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 TAAR6Q96RI8 345 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 TBX5Q99593 518 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 CHCHD6Q9BRQ6 235 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 LHX6Q9UPM6 363 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 PNMA8CA0A1B0GUJ8 204 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 SLC22A31A6NKX4 558 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 TFECO14948 347 aaPredicted RBP16.57■□□□□ 0.24
SMPD1-208ENST00000533123 CLPXO76031 633 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 HIST1H2ABP04908 130 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 CLK1P49759 484 aaKnown RBP16.57■□□□□ 0.24
SMPD1-208ENST00000533123 CTXN1P60606 82 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 RAC1P63000 192 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 MYBPHQ13203 477 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 C19orf48Q6RUI8 117 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 HIST3H2AQ7L7L0 130 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 LSM14AQ8ND56 463 aaKnown RBP16.57■□□□□ 0.24
SMPD1-208ENST00000533123 NPEPL1Q8NDH3 523 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 SLC25A43Q8WUT9 341 aaPredicted RBP16.57■□□□□ 0.24
SMPD1-208ENST00000533123 ZNRF4Q8WWF5 429 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 HIST1H2ACQ93077 130 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 CENPOQ9BU64 300 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 ERVK13-1Q9NX77 482 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 QPCTLQ9NXS2 382 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 KLHL21Q9UJP4 597 aa16.57■□□□□ 0.24
SMPD1-208ENST00000533123 SVILO95425 2214 aa16.56■□□□□ 0.24
SMPD1-208ENST00000533123 OR6C68A6NDL8 312 aa16.56■□□□□ 0.24
SMPD1-208ENST00000533123 H0YC42 278 aa16.56■□□□□ 0.24
SMPD1-208ENST00000533123 CD14P08571 375 aa16.56■□□□□ 0.24
SMPD1-208ENST00000533123 TSPAN19P0C672 248 aa16.56■□□□□ 0.24
SMPD1-208ENST00000533123 ATRXP46100 2492 aa16.56■□□□□ 0.24
SMPD1-208ENST00000533123 MLLT11Q13015 90 aaPredicted RBP16.56■□□□□ 0.24
SMPD1-208ENST00000533123 RGS21Q2M5E4 152 aa16.56■□□□□ 0.24
SMPD1-208ENST00000533123 LIPKQ5VXJ0 399 aa16.56■□□□□ 0.24
SMPD1-208ENST00000533123 C5orf46Q6UWT4 87 aa16.56■□□□□ 0.24
SMPD1-208ENST00000533123 NCCRP1Q6ZVX7 275 aaPredicted RBP16.56■□□□□ 0.24
SMPD1-208ENST00000533123 ZDHHC11Q9H8X9 412 aa16.56■□□□□ 0.24
SMPD1-208ENST00000533123 TAS2R5Q9NYW4 299 aa16.56■□□□□ 0.24
SMPD1-208ENST00000533123 LIPGQ9Y5X9 500 aa16.56■□□□□ 0.24
SMPD1-208ENST00000533123 C12orf71A8MTZ7 269 aa16.55■□□□□ 0.24
SMPD1-208ENST00000533123 OR2T1O43869 369 aa16.55■□□□□ 0.24
SMPD1-208ENST00000533123 CDKN2AP42771 156 aaKnown RBP16.55■□□□□ 0.24
SMPD1-208ENST00000533123 CLDN20P56880 219 aa16.55■□□□□ 0.24
SMPD1-208ENST00000533123 OR7A5Q15622 319 aa16.55■□□□□ 0.24
SMPD1-208ENST00000533123 ZNF485Q8NCK3 441 aa16.55■□□□□ 0.24
SMPD1-208ENST00000533123 ZMYND19Q96E35 227 aaPredicted RBP16.55■□□□□ 0.24
SMPD1-208ENST00000533123 DDOQ99489 341 aa16.55■□□□□ 0.24
SMPD1-208ENST00000533123 POTEKPQ9BYX7 375 aa16.55■□□□□ 0.24
SMPD1-208ENST00000533123 ADGRL4Q9HBW9 690 aa16.55■□□□□ 0.24
SMPD1-208ENST00000533123 ACKR4Q9NPB9 350 aa16.55■□□□□ 0.24
SMPD1-208ENST00000533123 SPTA1P02549 2419 aa16.55■□□□□ 0.24
SMPD1-208ENST00000533123 FTCDNL1E5RQL4 147 aa16.55■□□□□ 0.24
SMPD1-208ENST00000533123 C11orf98E9PRG8 122 aa16.55■□□□□ 0.24
SMPD1-208ENST00000533123 M0R3G1 203 aa16.55■□□□□ 0.24
SMPD1-208ENST00000533123 LRRTM2O43300 516 aa16.55■□□□□ 0.24
SMPD1-208ENST00000533123 WISP2O76076 250 aa16.55■□□□□ 0.24
SMPD1-208ENST00000533123 FKBP2P26885 142 aaKnown RBP16.55■□□□□ 0.24
SMPD1-208ENST00000533123 IDUAP35475 653 aa16.55■□□□□ 0.24
SMPD1-208ENST00000533123 MAMDC2Q7Z304 686 aaPredicted RBP16.55■□□□□ 0.24
SMPD1-208ENST00000533123 UBQLNLQ8IYU4 475 aa16.55■□□□□ 0.24
SMPD1-208ENST00000533123 ZFP41Q8N8Y5 198 aa16.55■□□□□ 0.24
SMPD1-208ENST00000533123 OR10H4Q8NGA5 316 aa16.55■□□□□ 0.24
SMPD1-208ENST00000533123 TSPAN32Q96QS1 320 aa16.55■□□□□ 0.24
SMPD1-208ENST00000533123 LDAHQ9H6V9 325 aa16.55■□□□□ 0.24
SMPD1-208ENST00000533123 ASB6Q9NWX5 421 aa16.55■□□□□ 0.24
SMPD1-208ENST00000533123 SEC14L5O43304 696 aa16.54■□□□□ 0.24
SMPD1-208ENST00000533123 LALBAP00709 142 aa16.54■□□□□ 0.24
SMPD1-208ENST00000533123 MT-ATP6P00846 226 aa16.54■□□□□ 0.24
SMPD1-208ENST00000533123 GRPRP30550 384 aa16.54■□□□□ 0.24
SMPD1-208ENST00000533123 LEG1Q6P5S2 330 aa16.54■□□□□ 0.24
SMPD1-208ENST00000533123 TRILQ7L0X0 811 aa16.54■□□□□ 0.24
SMPD1-208ENST00000533123 PHC2Q8IXK0 858 aa16.54■□□□□ 0.24
SMPD1-208ENST00000533123 MFSD8Q8NHS3 518 aa16.54■□□□□ 0.24
SMPD1-208ENST00000533123 DYNC2LI1Q8TCX1 351 aa16.54■□□□□ 0.24
SMPD1-208ENST00000533123 ZHX1-C8orf76Q96EF9 292 aa16.54■□□□□ 0.24
SMPD1-208ENST00000533123 H7C1C5 153 aa16.54■□□□□ 0.24
SMPD1-208ENST00000533123 IDH3BO43837 385 aa16.54■□□□□ 0.24
SMPD1-208ENST00000533123 GPX5O75715 221 aa16.54■□□□□ 0.24
SMPD1-208ENST00000533123 PLGP00747 810 aaPredicted RBP16.54■□□□□ 0.24
SMPD1-208ENST00000533123 SBK2P0C263 348 aa16.54■□□□□ 0.24
SMPD1-208ENST00000533123 POU3F2P20265 443 aaPredicted RBP16.54■□□□□ 0.24
SMPD1-208ENST00000533123 SDHAP31040 664 aa16.54■□□□□ 0.24
SMPD1-208ENST00000533123 LCN6P62502 163 aa16.54■□□□□ 0.24
SMPD1-208ENST00000533123 ARMC4Q5T2S8 1044 aa16.54■□□□□ 0.24
SMPD1-208ENST00000533123 TIMP4Q99727 224 aa16.54■□□□□ 0.24
SMPD1-208ENST00000533123 JAM3Q9BX67 310 aa16.54■□□□□ 0.24
SMPD1-208ENST00000533123 RACGAP1Q9H0H5 632 aa16.54■□□□□ 0.24
SMPD1-208ENST00000533123 EXO5Q9H790 373 aa16.54■□□□□ 0.24
SMPD1-208ENST00000533123 ISG20L2Q9H9L3 353 aaKnown RBP16.54■□□□□ 0.24
SMPD1-208ENST00000533123 NDUFB11Q9NX14 153 aa16.54■□□□□ 0.24
SMPD1-208ENST00000533123 TUBD1Q9UJT1 453 aa16.54■□□□□ 0.24
SMPD1-208ENST00000533123 HDGFL3Q9Y3E1 203 aa16.54■□□□□ 0.24
SMPD1-208ENST00000533123 A0A0J9YW62 118 aa16.53■□□□□ 0.24
SMPD1-208ENST00000533123 LIPT2A6NK58 231 aa16.53■□□□□ 0.24
SMPD1-208ENST00000533123 FAM171A2A8MVW0 826 aa16.53■□□□□ 0.24
SMPD1-208ENST00000533123 TNFSF11O14788 317 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms