RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 RETREG3Q86VR2 466 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 SNX32Q86XE0 403 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 PAQR4Q8N4S7 273 aaPredicted RBP11.11□□□□□ -0.63
COPB1-209ENST00000533096 SLC30A7Q8NEW0 376 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 TIMD4Q96H15 378 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 LRR1Q96L50 414 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 GAL3ST1Q99999 423 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 PAIP2Q9BPZ3 127 aaKnown RBP11.11□□□□□ -0.63
COPB1-209ENST00000533096 ASPNQ9BXN1 380 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 UNKLQ9H9P5 680 aaKnown RBP11.11□□□□□ -0.63
COPB1-209ENST00000533096 AIG1Q9NVV5 245 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 ZNF224Q9NZL3 707 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 SLC7A8Q9UHI5 535 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 OPN4Q9UHM6 478 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.11□□□□□ -0.63
COPB1-209ENST00000533096 TENM1Q9UKZ4 2725 aa11.11□□□□□ -0.63
COPB1-209ENST00000533096 DSPPQ9NZW4 1301 aa11.1□□□□□ -0.63
COPB1-209ENST00000533096 NUP214P35658 2090 aaPredicted RBP11.1□□□□□ -0.63
COPB1-209ENST00000533096 IGKV1D-42A0A075B6H8 117 aa11.1□□□□□ -0.63
COPB1-209ENST00000533096 C5orf58C9J3I9 102 aa11.1□□□□□ -0.63
COPB1-209ENST00000533096 CLDN25C9JDP6 229 aa11.1□□□□□ -0.63
COPB1-209ENST00000533096 SPRY3O43610 288 aa11.1□□□□□ -0.63
COPB1-209ENST00000533096 TYROBPO43914 113 aa11.1□□□□□ -0.63
COPB1-209ENST00000533096 ZNF500O60304 480 aaPredicted RBP11.1□□□□□ -0.63
COPB1-209ENST00000533096 DEAF1O75398 565 aaPredicted RBP11.1□□□□□ -0.63
COPB1-209ENST00000533096 OR6A2O95222 327 aa11.1□□□□□ -0.63
COPB1-209ENST00000533096 IGHV2-5P01817 119 aa11.1□□□□□ -0.63
COPB1-209ENST00000533096 CCNOP22674 350 aa11.1□□□□□ -0.63
COPB1-209ENST00000533096 ETV4P43268 484 aa11.1□□□□□ -0.63
COPB1-209ENST00000533096 CSNK1A1P48729 337 aa11.1□□□□□ -0.63
COPB1-209ENST00000533096 BIDP55957 195 aa11.1□□□□□ -0.63
COPB1-209ENST00000533096 LRRC74AQ0VAA2 488 aa11.1□□□□□ -0.63
COPB1-209ENST00000533096 BAMBIQ13145 260 aa11.1□□□□□ -0.63
COPB1-209ENST00000533096 PCGF3Q3KNV8 242 aa11.1□□□□□ -0.63
COPB1-209ENST00000533096 C6orf10Q5SRN2 563 aa11.1□□□□□ -0.63
COPB1-209ENST00000533096 ZNF584Q8IVC4 421 aa11.1□□□□□ -0.63
COPB1-209ENST00000533096 BCL6BQ8N143 479 aaPredicted RBP11.1□□□□□ -0.63
COPB1-209ENST00000533096 SLC22A24Q8N4F4 322 aa11.1□□□□□ -0.63
COPB1-209ENST00000533096 DCLRE1CQ96SD1 692 aaKnown RBP11.1□□□□□ -0.63
COPB1-209ENST00000533096 SORT1Q99523 831 aa11.1□□□□□ -0.63
COPB1-209ENST00000533096 SLCO1C1Q9NYB5 712 aa11.1□□□□□ -0.63
COPB1-209ENST00000533096 GPR45Q9Y5Y3 372 aa11.1□□□□□ -0.63
COPB1-209ENST00000533096 DYSFO75923 2080 aa11.09□□□□□ -0.63
COPB1-209ENST00000533096 SLC22A3O75751 556 aa11.09□□□□□ -0.63
COPB1-209ENST00000533096 SBK2P0C263 348 aa11.09□□□□□ -0.63
COPB1-209ENST00000533096 OR8G3PP0DMU2 310 aa11.09□□□□□ -0.63
COPB1-209ENST00000533096 KITP10721 976 aa11.09□□□□□ -0.63
COPB1-209ENST00000533096 MAKP20794 623 aa11.09□□□□□ -0.63
COPB1-209ENST00000533096 EPHA3P29320 983 aa11.09□□□□□ -0.63
COPB1-209ENST00000533096 PCGF2P35227 344 aa11.09□□□□□ -0.63
COPB1-209ENST00000533096 UCP2P55851 309 aa11.09□□□□□ -0.63
COPB1-209ENST00000533096 HNRNPA0Q13151 305 aaKnown RBP11.09□□□□□ -0.63
COPB1-209ENST00000533096 WDR88Q6ZMY6 472 aa11.09□□□□□ -0.63
COPB1-209ENST00000533096 PIWIL3Q7Z3Z3 882 aaKnown RBP11.09□□□□□ -0.63
COPB1-209ENST00000533096 EIF1ADQ8N9N8 165 aaKnown RBP11.09□□□□□ -0.63
COPB1-209ENST00000533096 ZNF519Q8TB69 540 aa11.09□□□□□ -0.63
COPB1-209ENST00000533096 ST7LQ8TDW4 575 aa11.09□□□□□ -0.63
COPB1-209ENST00000533096 DNAJA4Q8WW22 397 aaPredicted RBP11.09□□□□□ -0.63
COPB1-209ENST00000533096 SLC47A1Q96FL8 570 aa11.09□□□□□ -0.63
COPB1-209ENST00000533096 MOGAT1Q96PD6 335 aa11.09□□□□□ -0.63
COPB1-209ENST00000533096 DENND2DQ9H6A0 471 aaPredicted RBP11.09□□□□□ -0.63
COPB1-209ENST00000533096 MEAF6Q9HAF1 191 aa11.09□□□□□ -0.63
COPB1-209ENST00000533096 TMEM27Q9HBJ8 222 aa11.09□□□□□ -0.63
COPB1-209ENST00000533096 KCNK9Q9NPC2 374 aa11.09□□□□□ -0.63
COPB1-209ENST00000533096 KLHL14Q9P2G3 628 aa11.09□□□□□ -0.63
COPB1-209ENST00000533096 ZNF69Q9UC07 566 aa11.09□□□□□ -0.63
COPB1-209ENST00000533096 LGALS13Q9UHV8 139 aa11.09□□□□□ -0.63
COPB1-209ENST00000533096 SLC22A23A1A5C7 686 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 PLPP3O14495 311 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 SDHDO14521 159 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 BIRC5O15392 142 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 TPST1O60507 370 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 BGLAPP02818 100 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 MT-ND5P03915 603 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 IL6P05231 212 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 ADORA3P0DMS8 318 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 PRTN3P24158 256 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 HTR2AP28223 471 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 RBMXP38159 391 aaKnown RBP11.08□□□□□ -0.64
COPB1-209ENST00000533096 ZNF81P51508 661 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 MOGQ16653 247 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 PDCD4Q53EL6 469 aaKnown RBP11.08□□□□□ -0.64
COPB1-209ENST00000533096 CEP85LQ5SZL2 805 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 TMEM53Q6P2H8 277 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 ULK3Q6PHR2 472 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 C5orf46Q6UWT4 87 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 NHLRC1Q6VVB1 395 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 ZNF627Q7L945 461 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 JAZF1Q86VZ6 243 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 GLB1L3Q8NCI6 653 aaPredicted RBP11.08□□□□□ -0.64
COPB1-209ENST00000533096 OR1J1Q8NGS3 322 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 DVL3Q92997 716 aaPredicted RBP11.08□□□□□ -0.64
COPB1-209ENST00000533096 VPS33AQ96AX1 596 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 ITCHQ96J02 903 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 EPYCQ99645 322 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 ROPN1BQ9BZX4 212 aaPredicted RBP11.08□□□□□ -0.64
COPB1-209ENST00000533096 RMND5AQ9H871 391 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 ROPN1Q9HAT0 212 aaPredicted RBP11.08□□□□□ -0.64
COPB1-209ENST00000533096 MMP26Q9NRE1 261 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 GLTPQ9NZD2 209 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms