RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 INIPQ9NRY2 104 aa13.4□□□□□ -0.26
CPSF1-210ENST00000532935 FAIMQ9NVQ4 179 aa13.4□□□□□ -0.26
CPSF1-210ENST00000532935 GLTPQ9NZD2 209 aa13.4□□□□□ -0.26
CPSF1-210ENST00000532935 CRNNQ9UBG3 495 aaPredicted RBP13.4□□□□□ -0.26
CPSF1-210ENST00000532935 MAGEL2Q9UJ55 1249 aa13.4□□□□□ -0.26
CPSF1-210ENST00000532935 POFUT2Q9Y2G5 429 aa13.4□□□□□ -0.26
CPSF1-210ENST00000532935 MTORP42345 2549 aa13.4□□□□□ -0.26
CPSF1-210ENST00000532935 ATP6V1G2-DDX39BF2Z307 99 aa13.39□□□□□ -0.27
CPSF1-210ENST00000532935 CD8AP01732 235 aa13.39□□□□□ -0.27
CPSF1-210ENST00000532935 T-ENOLP0DO92 83 aa13.39□□□□□ -0.27
CPSF1-210ENST00000532935 MAKP20794 623 aa13.39□□□□□ -0.27
CPSF1-210ENST00000532935 MSX2P35548 267 aaPredicted RBP13.39□□□□□ -0.27
CPSF1-210ENST00000532935 PRKCDQ05655 676 aa13.39□□□□□ -0.27
CPSF1-210ENST00000532935 C3orf36Q3SXR2 165 aa13.39□□□□□ -0.27
CPSF1-210ENST00000532935 ZNF730Q6ZMV8 503 aa13.39□□□□□ -0.27
CPSF1-210ENST00000532935 ZNF813Q6ZN06 617 aa13.39□□□□□ -0.27
CPSF1-210ENST00000532935 ASRGL1Q7L266 308 aa13.39□□□□□ -0.27
CPSF1-210ENST00000532935 ZNF627Q7L945 461 aa13.39□□□□□ -0.27
CPSF1-210ENST00000532935 DTX2Q86UW9 622 aa13.39□□□□□ -0.27
CPSF1-210ENST00000532935 CCDC36Q8IYA8 594 aa13.39□□□□□ -0.27
CPSF1-210ENST00000532935 RNF113BQ8IZP6 322 aaKnown RBP13.39□□□□□ -0.27
CPSF1-210ENST00000532935 FAM86B1Q8N7N1 296 aa13.39□□□□□ -0.27
CPSF1-210ENST00000532935 FAM169BQ8N8A8 192 aa13.39□□□□□ -0.27
CPSF1-210ENST00000532935 DHRS9Q9BPW9 319 aa13.39□□□□□ -0.27
CPSF1-210ENST00000532935 TRAF4Q9BUZ4 470 aaPredicted RBP13.39□□□□□ -0.27
CPSF1-210ENST00000532935 LRMDAQ9H2I8 198 aa13.39□□□□□ -0.27
CPSF1-210ENST00000532935 NMNAT1Q9HAN9 279 aaPredicted RBP13.39□□□□□ -0.27
CPSF1-210ENST00000532935 MOKQ9UQ07 419 aa13.39□□□□□ -0.27
CPSF1-210ENST00000532935 HIF3AQ9Y2N7 669 aa13.39□□□□□ -0.27
CPSF1-210ENST00000532935 ATP23Q9Y6H3 246 aa13.39□□□□□ -0.27
CPSF1-210ENST00000532935 A0A087WUU8 490 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 ZNF503-AS2A6NEH8 195 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 MCIDASD6RGH6 385 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 IGKV3-15P01624 115 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 IGLV1-44P01699 117 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 IGHG1P01857 330 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 CECR9P0C854 216 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 PGA4P0DJD7 388 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 PGA3P0DJD8 388 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 SAGP10523 405 aaPredicted RBP13.38□□□□□ -0.27
CPSF1-210ENST00000532935 B4GALT1P15291 398 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 CBR1P16152 277 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 CAPZA2P47755 286 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 FABP6P51161 128 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 DAP3P51398 398 aaKnown RBP13.38□□□□□ -0.27
CPSF1-210ENST00000532935 ATP5J2P56134 94 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 RUNX1T1Q06455 604 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 LAPTM4AQ15012 233 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 SPATS1Q496A3 300 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 AGAP6Q5VW22 663 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 LRFN4Q6PJG9 635 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 MBOAT2Q6ZWT7 520 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 HDDC2Q7Z4H3 204 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 MEX3DQ86XN8 651 aaKnown RBP13.38□□□□□ -0.27
CPSF1-210ENST00000532935 ASB10Q8WXI3 467 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 GTPBP3Q969Y2 492 aaKnown RBP13.38□□□□□ -0.27
CPSF1-210ENST00000532935 C7orf34Q96L11 122 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 FOXB1Q99853 325 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 KCNS3Q9BQ31 491 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 KATNB1Q9BVA0 655 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 GRIP2Q9C0E4 1043 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 C1orf21Q9H246 121 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 ANKRD19PQ9H560 264 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 NDUFAF4Q9P032 175 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 FAM32AQ9Y421 112 aaKnown RBP13.38□□□□□ -0.27
CPSF1-210ENST00000532935 V9GYQ6 96 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 ARFGEF3Q5TH69 2177 aa13.38□□□□□ -0.27
CPSF1-210ENST00000532935 NPIPB13A6NJU9 1138 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 EFCAB9A8MZ26 197 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 B2RBV5 119 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 NPIPB4C9JG80 1138 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 hCG_2039718K7EN88 272 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 ARPC2O15144 300 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 HLA-HP01893 362 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 CRYAAP02489 173 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 H1F0P07305 194 aaKnown RBP13.37□□□□□ -0.27
CPSF1-210ENST00000532935 CELA3BP08861 270 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 RHCEP18577 417 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 TTKP33981 857 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 CDKN1AP38936 164 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 CLRN1P58418 232 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 VLDLRP98155 873 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 NAAAQ02083 359 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 ALG10Q5BKT4 473 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 ZNF544Q6NX49 715 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 TBPL2Q6SJ96 375 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 MDP1Q86V88 176 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 CDK20Q8IZL9 346 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 FBXL14Q8N1E6 418 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 MUC15Q8N387 334 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 SLC7A13Q8TCU3 470 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 TRMT61AQ96FX7 289 aaKnown RBP13.37□□□□□ -0.27
CPSF1-210ENST00000532935 PYURFQ96I23 114 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 Q96MF0 132 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 NSMCE2Q96MF7 247 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 RAB3IPQ96QF0 476 aaPredicted RBP13.37□□□□□ -0.27
CPSF1-210ENST00000532935 MRPL13Q9BYD1 178 aaKnown RBP13.37□□□□□ -0.27
CPSF1-210ENST00000532935 SEC61A2Q9H9S3 476 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 DLL4Q9NR61 685 aa13.37□□□□□ -0.27
CPSF1-210ENST00000532935 B3GNT2Q9NY97 397 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms