RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 TRMUO75648 421 aaKnown RBP17.36■□□□□ 0.37
CPSF1-209ENST00000532725 ATP5HO75947 161 aa17.36■□□□□ 0.37
CPSF1-209ENST00000532725 KRT36O76013 467 aa17.36■□□□□ 0.37
CPSF1-209ENST00000532725 WNT11O96014 354 aa17.36■□□□□ 0.37
CPSF1-209ENST00000532725 ACADSP16219 412 aa17.36■□□□□ 0.37
CPSF1-209ENST00000532725 DAP3P51398 398 aaKnown RBP17.36■□□□□ 0.37
CPSF1-209ENST00000532725 ZNF83P51522 516 aa17.36■□□□□ 0.37
CPSF1-209ENST00000532725 IST1P53990 364 aa17.36■□□□□ 0.37
CPSF1-209ENST00000532725 CTXN1P60606 82 aa17.36■□□□□ 0.37
CPSF1-209ENST00000532725 CHRNB3Q05901 458 aa17.36■□□□□ 0.37
CPSF1-209ENST00000532725 TAF11Q15544 211 aa17.36■□□□□ 0.37
CPSF1-209ENST00000532725 ADAM5Q6NVV9 412 aa17.36■□□□□ 0.37
CPSF1-209ENST00000532725 PAMR1Q6UXH9 720 aa17.36■□□□□ 0.37
CPSF1-209ENST00000532725 ZER1Q7Z7L7 766 aa17.36■□□□□ 0.37
CPSF1-209ENST00000532725 LRGUKQ96M69 825 aa17.36■□□□□ 0.37
CPSF1-209ENST00000532725 ALPK1Q96QP1 1244 aa17.36■□□□□ 0.37
CPSF1-209ENST00000532725 ULBP2Q9BZM5 246 aa17.36■□□□□ 0.37
CPSF1-209ENST00000532725 ZNF346Q9UL40 294 aaKnown RBP17.36■□□□□ 0.37
CPSF1-209ENST00000532725 EDARQ9UNE0 448 aa17.36■□□□□ 0.37
CPSF1-209ENST00000532725 PLEKHA6Q9Y2H5 1048 aa17.36■□□□□ 0.37
CPSF1-209ENST00000532725 RNF115Q9Y4L5 304 aa17.36■□□□□ 0.37
CPSF1-209ENST00000532725 AQP12BA6NM10 295 aa17.35■□□□□ 0.37
CPSF1-209ENST00000532725 CENPBD1B2RD01 187 aa17.35■□□□□ 0.37
CPSF1-209ENST00000532725 ATE1O95260 518 aa17.35■□□□□ 0.37
CPSF1-209ENST00000532725 IGHG1P01857 330 aa17.35■□□□□ 0.37
CPSF1-209ENST00000532725 IGHMP01871 453 aa17.35■□□□□ 0.37
CPSF1-209ENST00000532725 PAX7P23759 505 aa17.35■□□□□ 0.37
CPSF1-209ENST00000532725 PTAFRP25105 342 aa17.35■□□□□ 0.37
CPSF1-209ENST00000532725 CD40P25942 277 aa17.35■□□□□ 0.37
CPSF1-209ENST00000532725 HOXC12P31275 282 aa17.35■□□□□ 0.37
CPSF1-209ENST00000532725 FAM98BQ52LJ0 330 aaKnown RBP17.35■□□□□ 0.37
CPSF1-209ENST00000532725 KLHL17Q6TDP4 642 aa17.35■□□□□ 0.37
CPSF1-209ENST00000532725 IGFN1Q86VF2 1251 aa17.35■□□□□ 0.37
CPSF1-209ENST00000532725 AQP12AQ8IXF9 295 aa17.35■□□□□ 0.37
CPSF1-209ENST00000532725 SIGLEC7Q9Y286 467 aa17.35■□□□□ 0.37
CPSF1-209ENST00000532725 POFUT2Q9Y2G5 429 aa17.35■□□□□ 0.37
CPSF1-209ENST00000532725 MAGED1Q9Y5V3 778 aaPredicted RBP17.35■□□□□ 0.37
CPSF1-209ENST00000532725 OTOGQ6ZRI0 2925 aa17.35■□□□□ 0.37
CPSF1-209ENST00000532725 MCIDASD6RGH6 385 aa17.34■□□□□ 0.37
CPSF1-209ENST00000532725 STAMBPO95630 424 aa17.34■□□□□ 0.37
CPSF1-209ENST00000532725 RAF1P04049 648 aa17.34■□□□□ 0.37
CPSF1-209ENST00000532725 QDPRP09417 244 aa17.34■□□□□ 0.37
CPSF1-209ENST00000532725 CD53P19397 219 aa17.34■□□□□ 0.37
CPSF1-209ENST00000532725 RASSF2P50749 326 aa17.34■□□□□ 0.37
CPSF1-209ENST00000532725 UBE2NP61088 152 aaKnown RBP17.34■□□□□ 0.37
CPSF1-209ENST00000532725 RPL27P61353 136 aaKnown RBP17.34■□□□□ 0.37
CPSF1-209ENST00000532725 KLHL24Q6TFL4 600 aa17.34■□□□□ 0.37
CPSF1-209ENST00000532725 TMEM108Q6UXF1 575 aa17.34■□□□□ 0.37
CPSF1-209ENST00000532725 HDDC2Q7Z4H3 204 aa17.34■□□□□ 0.37
CPSF1-209ENST00000532725 CCDC36Q8IYA8 594 aa17.34■□□□□ 0.37
CPSF1-209ENST00000532725 ADGRG5Q8IZF4 528 aa17.34■□□□□ 0.37
CPSF1-209ENST00000532725 SYT14Q8NB59 555 aa17.34■□□□□ 0.37
CPSF1-209ENST00000532725 HDAC2Q92769 488 aaKnown RBP17.34■□□□□ 0.37
CPSF1-209ENST00000532725 MCHR2Q969V1 340 aa17.34■□□□□ 0.37
CPSF1-209ENST00000532725 UBTD1Q9HAC8 227 aa17.34■□□□□ 0.37
CPSF1-209ENST00000532725 CCM2LQ9NUG4 571 aaPredicted RBP17.34■□□□□ 0.37
CPSF1-209ENST00000532725 STX18Q9P2W9 335 aaKnown RBP17.34■□□□□ 0.37
CPSF1-209ENST00000532725 AURKCQ9UQB9 309 aa17.34■□□□□ 0.37
CPSF1-209ENST00000532725 POMPQ9Y244 141 aa17.34■□□□□ 0.37
CPSF1-209ENST00000532725 LYVE1Q9Y5Y7 322 aa17.34■□□□□ 0.37
CPSF1-209ENST00000532725 SHISA9B4DS77 424 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 M0R1B8 84 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 ABCD4O14678 606 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 HS3ST1O14792 307 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 DHHO43323 396 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 SEC14L2O76054 403 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 RAP2AP10114 183 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 DNASE1P24855 282 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 ZNF133P52736 654 aaPredicted RBP17.33■□□□□ 0.36
CPSF1-209ENST00000532725 CLRN1P58418 232 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 FXYD6P3P58550 94 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 TUBA1BP68363 451 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 TUBA4AP68366 448 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 KEAP1Q14145 624 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 C1orf94Q6P1W5 598 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 ZNF813Q6ZN06 617 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 TUBA1AQ71U36 451 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 FAM169BQ8N8A8 192 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 OR4C15Q8NGM1 316 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 CANT1Q8WVQ1 401 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 AKAP1Q92667 903 aaKnown RBP eCLIP17.33■□□□□ 0.36
CPSF1-209ENST00000532725 NEUROG1Q92886 237 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 NMD3Q96D46 503 aaKnown RBP17.33■□□□□ 0.36
CPSF1-209ENST00000532725 MBD6Q96DN6 1003 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 TSPAN32Q96QS1 320 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 KCNK17Q96T54 332 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 FOXB1Q99853 325 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 TRIM15Q9C019 465 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 KRCC1Q9NPI7 259 aaPredicted RBP17.33■□□□□ 0.36
CPSF1-209ENST00000532725 CRNNQ9UBG3 495 aaPredicted RBP17.33■□□□□ 0.36
CPSF1-209ENST00000532725 SLC7A8Q9UHI5 535 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 ITGB1BP2Q9UKP3 347 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 TMCC3Q9ULS5 477 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 MGAT4BQ9UQ53 548 aa17.33■□□□□ 0.36
CPSF1-209ENST00000532725 ZNF503-AS2A6NEH8 195 aa17.32■□□□□ 0.36
CPSF1-209ENST00000532725 UNC119BA6NIH7 251 aa17.32■□□□□ 0.36
CPSF1-209ENST00000532725 TNFRSF11BO00300 401 aa17.32■□□□□ 0.36
CPSF1-209ENST00000532725 OR10H3O60404 316 aa17.32■□□□□ 0.36
CPSF1-209ENST00000532725 CD14P08571 375 aa17.32■□□□□ 0.36
CPSF1-209ENST00000532725 ACVR1BP36896 505 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 281.1 ms