RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 H0YIG0 161 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 DEFB109BQ30KR1 87 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 SLC35D3Q5M8T2 416 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 CD300LGQ6UXG3 332 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 SLC22A24Q8N4F4 322 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 MZB1Q8WU39 189 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 PCED1AQ9H1Q7 454 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 NTNG1Q9Y2I2 539 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 HPGDSO60760 199 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 GABRA5P31644 462 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 CAPZBP47756 277 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 UBE2NLQ5JXB2 153 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 GDF7Q7Z4P5 450 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 CD163Q86VB7 1156 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 LIPHQ8WWY8 451 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 PHYHIPQ92561 330 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 TSLPQ969D9 159 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 ELMOD3Q96FG2 381 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 ZNF891A8MT65 544 aaPredicted RBP13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 GABRPO00591 440 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 BET1O15155 118 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 GLB1P16278 677 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 CD22P20273 847 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 FOXK2Q01167 660 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 OR7G2Q8NG99 324 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 TMEM106AQ96A25 262 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 OR51J1Q9H342 316 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 SMOC1Q9H4F8 434 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 C19orf53Q9UNZ5 99 aaPredicted RBP13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 MDFIC2A0A1B0GVS7 189 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 A0A1W2PR48 441 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 BTBD17A6NE02 478 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 H3BMQ9 156 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 ENSAO43768 121 aaKnown RBP13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 UBBP0CG47 229 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 DUSP5Q16690 384 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 RBM45Q8IUH3 476 aaKnown RBP13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 KLHDC8BQ8IXV7 354 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 MORN4Q8NDC4 146 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 H1FXQ92522 213 aaKnown RBP13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 AMBRA1Q9C0C7 1298 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 ZNF355PQ9NSJ1 428 aa13.59□□□□□ -0.23
PCDHA9-202ENST00000532602 ZNF831Q5JPB2 1677 aa13.58□□□□□ -0.23
PCDHA9-202ENST00000532602 HMX2A2RU54 273 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 SPINT2O43291 252 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 UPK1BO75841 260 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 TPT1P13693 172 aaKnown RBP13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 IL9P15248 144 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 RFC3P40938 356 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 EMX1Q04741 257 aaPredicted RBP13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 ZNF529Q6P280 563 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 TMEM71Q6P5X7 295 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 STT3BQ8TCJ2 826 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 UTP4Q969X6 686 aaKnown RBP13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 RASD2Q96D21 266 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 TAS2R16Q9NYV7 291 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 PRELID1Q9Y255 219 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 OR51B4Q9Y5P0 310 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 MAKP20794 623 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 SLC15A4Q8N697 577 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 BAHD1Q8TBE0 780 aaPredicted RBP13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 NMNAT2Q9BZQ4 307 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 COL11A2P13942 1736 aaPredicted RBP13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 DOCK5Q9H7D0 1870 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 A0A1W2PQ09 198 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 AKR7A3O95154 331 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 SPEM2Q0P670 501 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 CRMP1Q14194 572 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 HLA-BQ31612 363 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 ZNF767PQ75MW2 155 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 NKAIN3Q8N8D7 197 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 C1QTNF6Q9BXI9 259 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 BARHL1Q9BZE3 327 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 NOX3Q9HBY0 568 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 NRIP3Q9NQ35 241 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 SERGEFQ9UGK8 458 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 FCRLAQ7L513 359 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 ZNF679Q8IYX0 411 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 CSF3RQ99062 836 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 HRASLSQ9HDD0 168 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 ACKR4Q9NPB9 350 aa13.58□□□□□ -0.24
PCDHA9-202ENST00000532602 CEACAM5P06731 702 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 SLC10A1Q14973 349 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 NLRP8Q86W28 1048 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 PM20D2Q8IYS1 436 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 OR14A2Q96R54 314 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 CHRNA9Q9UGM1 479 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 R4GN57 208 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 GPX2P18283 190 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 ALDH3B1P43353 468 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 BATF2Q8N1L9 274 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 SEMA4GQ9NTN9 838 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 SOCS6O14544 535 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 CDK4P11802 303 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 BLVRBP30043 206 aaPredicted RBP13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 VEGFCP49767 419 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 TNK1Q13470 666 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 CAMK2BQ13554 666 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 GK2Q14410 553 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms