RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 IGKV3D-15A0A087WSY6 115 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 CPSF4LA6NMK7 179 aaKnown RBP6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 ZNF724A8MTY0 619 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 BBIP1A8MTZ0 92 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 A8MV72 311 aaPredicted RBP6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 FTCDNL1E5RQL4 147 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 NME4O00746 187 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 GYG2O15488 501 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 KCNAB3O43448 404 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 LYPD3O95274 346 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 SOD3P08294 240 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 UQCRBP14927 111 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 IGHV1-2P23083 117 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 KDELR2P33947 212 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 PCGF2P35227 344 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 IDUAP35475 653 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 CDKN1AP38936 164 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 OR1E2P47887 323 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 OR3A2P47893 321 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 MAP2K6P52564 334 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 CDH12P55289 794 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 RGS8P57771 180 aaPredicted RBP6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 IL13RA1P78552 427 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 LGALS3BPQ08380 585 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 PDK3Q15120 406 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 MAPRE2Q15555 327 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 NRF1Q16656 503 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 DNAL1Q4LDG9 190 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 ALG10BQ5I7T1 473 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 OTUD3Q5T2D3 398 aaPredicted RBP6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 ABLIM2Q6H8Q1 611 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 ULK3Q6PHR2 472 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 PAQR6Q6TCH4 344 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 WDR88Q6ZMY6 472 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 CCDC80Q76M96 950 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 ASRGL1Q7L266 308 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 GALNT5Q7Z7M9 940 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 ARIH2OSQ8N7S6 290 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 PCYOX1LQ8NBM8 494 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 VANGL1Q8TAA9 524 aaPredicted RBP6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 NEUROG1Q92886 237 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 SLC38A4Q969I6 547 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 SLC35B4Q969S0 331 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 MCUR1Q96AQ8 359 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 S100PBPQ96BU1 408 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 ZNF385AQ96PM9 386 aaKnown RBP6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 MCHR1Q99705 422 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 ARHGDIGQ99819 225 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 SH3GL1Q99961 368 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 BTBD10Q9BSF8 475 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 TRIM2Q9C040 744 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 CXorf56Q9H5V9 222 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 EFCAB1Q9HAE3 211 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 CACYBPQ9HB71 228 aaKnown RBP6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 NDE1Q9NXR1 346 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 RPS6KB2Q9UBS0 482 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 NOSIPQ9Y314 301 aaKnown RBP6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 SH3GLB1Q9Y371 365 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 FLVCR1Q9Y5Y0 555 aa6.13□□□□□ -1.43
TRIM53CP-201ENST00000531490 A0A087WUJ7 227 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 A0A0B4J2E0 115 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 A0A1B0GX12 115 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 PRORSD1PA6NEY8 169 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 AQP7P3A6NL99 342 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 ANKRD65E5RJM6 399 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 MS4A18H0YCH9 400 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 HS3ST1O14792 307 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 TLX2O43763 284 aaPredicted RBP6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 EIF1BO60739 113 aaKnown RBP6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 MRPL33O75394 65 aaKnown RBP6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 LYZL6O75951 148 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 IGHV4-39P01824 125 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 GPIP06744 558 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 FAM157CP0CG43 387 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 PSMB1P20618 241 aaKnown RBP6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 PCYT1AP49585 367 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 MECP2P51608 486 aaKnown RBP6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 SLC16A1P53985 500 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 MXRA7P84157 204 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 LIPEQ05469 1076 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 RUNX1T1Q06455 604 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 ITGADQ13349 1161 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 TOP3AQ13472 1001 aaPredicted RBP6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 RIPK1Q13546 671 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 MS4A18Q3C1V0 323 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 ENTPD8Q5MY95 495 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 C9orf135Q5VTT2 229 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 TMEM225Q6GV28 225 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 NHLRC1Q6VVB1 395 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 Q6ZT83 130 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 CREB3L2Q70SY1 520 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 PATL1Q86TB9 770 aaKnown RBP6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 GPAT4Q86UL3 456 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 EPHX4Q8IUS5 362 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 WDFY1Q8IWB7 410 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 ZNF100Q8IYN0 542 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 MICU2Q8IYU8 434 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 UBE2J2Q8N2K1 259 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 OR2T12Q8NG77 320 aa6.12□□□□□ -1.43
TRIM53CP-201ENST00000531490 MFSD8Q8NHS3 518 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms