RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 PIGVQ9NUD9 493 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 DDX19AQ9NUU7 478 aaKnown RBP2.79□□□□□ -1.96
PTPRK-220ENST00000531466 RDH8Q9NYR8 311 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 AHSPQ9NZD4 102 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 LCMT1Q9UIC8 334 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 POFUT2Q9Y2G5 429 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 WIF1Q9Y5W5 379 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 KIAA1217Q5T5P2 1943 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 CUX2O14529 1486 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 RRBP1Q9P2E9 1410 aaKnown RBP2.78□□□□□ -1.96
PTPRK-220ENST00000531466 PLEKHG1Q9ULL1 1385 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 USP42Q9H9J4 1324 aaKnown RBP2.78□□□□□ -1.96
PTPRK-220ENST00000531466 ZNF532Q9HCE3 1301 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 A0A1W2PQ67 120 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 SLC5A10A0PJK1 596 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 FABP12A6NFH5 140 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 ATP6V1G2-DDX39BF2Z307 99 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 KLRC4-KLRK1H3BQV0 150 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 FOXE1O00358 373 aaPredicted RBP2.78□□□□□ -1.96
PTPRK-220ENST00000531466 KPNA3O00505 521 aaPredicted RBP2.78□□□□□ -1.96
PTPRK-220ENST00000531466 RAB29O14966 203 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 SLC31A2O15432 143 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 CHP2O43745 196 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 SRPX2O60687 465 aaPredicted RBP2.78□□□□□ -1.96
PTPRK-220ENST00000531466 TPST2O60704 377 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 CTNSO60931 367 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 N4BP1O75113 896 aaKnown RBP2.78□□□□□ -1.96
PTPRK-220ENST00000531466 SERPINB7O75635 380 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 ANGPTL1O95841 491 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 PGK1P00558 417 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 RPN2P04844 631 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 GSTA1P08263 222 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 PET100P0DJ07 73 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 THRAP10827 490 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 PSKH1P11801 424 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 COX4I1P13073 169 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 CMA1P23946 247 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 FASP25445 335 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 S100PP25815 95 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 HNRNPH3P31942 346 aaKnown RBP2.78□□□□□ -1.96
PTPRK-220ENST00000531466 RCVRNP35243 200 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 IDH2P48735 452 aaKnown RBP2.78□□□□□ -1.96
PTPRK-220ENST00000531466 PRKXP51817 358 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 AP2S1P53680 142 aaPredicted RBP2.78□□□□□ -1.96
PTPRK-220ENST00000531466 CLDN18P56856 261 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 ADARB1P78563 741 aaKnown RBP2.78□□□□□ -1.96
PTPRK-220ENST00000531466 CCL7P80098 99 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 NAAAQ02083 359 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 PAX5Q02548 391 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 RBBP4Q09028 425 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 GRB14Q14449 540 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 CYTH1Q15438 398 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 SLC15A2Q16348 729 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 BSXQ3C1V8 233 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 ADPRMQ3LIE5 342 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 ZNF691Q5VV52 312 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 FAM199XQ6PEV8 388 aaPredicted RBP2.78□□□□□ -1.96
PTPRK-220ENST00000531466 PODNL1Q6PEZ8 512 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 CD300LGQ6UXG3 332 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 NPSR1Q6W5P4 371 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 SETD3Q86TU7 594 aaPredicted RBP2.78□□□□□ -1.96
PTPRK-220ENST00000531466 TMEM17Q86X19 198 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 DHFR2Q86XF0 187 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 MMAAQ8IVH4 418 aaKnown RBP2.78□□□□□ -1.96
PTPRK-220ENST00000531466 APCDD1Q8J025 514 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 MTURNQ8N3F0 131 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 PRSS35Q8N3Z0 413 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 FBXO36Q8NEA4 188 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 OR5M9Q8NGP3 310 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 NEK7Q8TDX7 302 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 TCEAL3Q969E4 200 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 TSACCQ96A04 125 aaPredicted RBP2.78□□□□□ -1.96
PTPRK-220ENST00000531466 FAM131CQ96AQ9 280 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 PYCR2Q96C36 320 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 HAUS1Q96CS2 278 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 SGTBQ96EQ0 304 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 AKR1E2Q96JD6 320 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 PACRGQ96M98 296 aaPredicted RBP2.78□□□□□ -1.96
PTPRK-220ENST00000531466 TSSK2Q96PF2 358 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 RAB40CQ96S21 281 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 EBNA1BP2Q99848 306 aaKnown RBP2.78□□□□□ -1.96
PTPRK-220ENST00000531466 SLC30A2Q9BRI3 323 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 ST6GALNAC5Q9BVH7 336 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 TSSK1BQ9BXA7 367 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 ZNF717Q9BY31 904 aaPredicted RBP2.78□□□□□ -1.96
PTPRK-220ENST00000531466 VCXQ9H320 206 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 DPEP2Q9H4A9 486 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 PLGRKTQ9HBL7 147 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 HRASLSQ9HDD0 168 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 CD209Q9NNX6 404 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 OR2S2Q9NQN1 319 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 GPR173Q9NS66 373 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 GIN1Q9NXP7 522 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 ARMCX1Q9P291 453 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 PISDQ9UG56 409 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 PITPNC1Q9UKF7 332 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 DIMT1Q9UNQ2 313 aaKnown RBP2.78□□□□□ -1.96
PTPRK-220ENST00000531466 PRELID3BQ9Y3B1 194 aa2.78□□□□□ -1.96
PTPRK-220ENST00000531466 POLR3HQ9Y535 204 aaPredicted RBP2.78□□□□□ -1.96
PTPRK-220ENST00000531466 KLK4Q9Y5K2 254 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms