RNA–Protein interactions for RNA: ENST00000530836.5

VPS28-212, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-212ENST00000530836 ADRA2AP08913 450 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 SBK2P0C263 348 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 CLUP10909 449 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 ETV1P50549 477 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 PLGLB1Q02325 96 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 TMEM225Q6GV28 225 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 ESPNLQ6ZVH7 1005 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 ANKRD13BQ86YJ7 626 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 ALDH16A1Q8IZ83 802 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 Q8NA96 180 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 ZFP62Q8NB50 900 aaPredicted RBP18.96■□□□□ 0.63
VPS28-212ENST00000530836 ISOC1Q96CN7 298 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 OXGR1Q96P68 337 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 MGLLQ99685 303 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 HES7Q9BYE0 225 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 ISYNA1Q9NPH2 558 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 RPRD1BQ9NQG5 326 aaKnown RBP18.96■□□□□ 0.63
VPS28-212ENST00000530836 ASB6Q9NWX5 421 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 TAS2R16Q9NYV7 291 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 LSM2Q9Y333 95 aaKnown RBP18.96■□□□□ 0.63
VPS28-212ENST00000530836 PRSS37A4D1T9 235 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 GLSO94925 669 aaPredicted RBP18.96■□□□□ 0.63
VPS28-212ENST00000530836 GYPBP06028 91 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 CAPZA2P47755 286 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 MEOX1P50221 254 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 P2RY4P51582 365 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 BLVRAP53004 296 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 GFRA1P56159 465 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 WNT4P56705 351 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 H3F3AP84243 136 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 POU3F1Q03052 451 aaPredicted RBP18.96■□□□□ 0.63
VPS28-212ENST00000530836 WIPI1Q5MNZ9 446 aaPredicted RBP18.96■□□□□ 0.63
VPS28-212ENST00000530836 SLC35D2Q76EJ3 337 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 SLC22A16Q86VW1 577 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 UEVLDQ8IX04 471 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 TMEM99Q8N816 258 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 YIPF6Q96EC8 236 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 CNN2Q99439 309 aaKnown RBP18.96■□□□□ 0.63
VPS28-212ENST00000530836 FUNDC2Q9BWH2 189 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 ADGRL4Q9HBW9 690 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 ERVK13-1Q9NX77 482 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 CLEC2DQ9UHP7 191 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 FKBP7Q9Y680 259 aa18.96■□□□□ 0.63
VPS28-212ENST00000530836 ACOT7O00154 380 aa18.95■□□□□ 0.62
VPS28-212ENST00000530836 OPN1LWP04000 364 aa18.95■□□□□ 0.62
VPS28-212ENST00000530836 RAC3P60763 192 aa18.95■□□□□ 0.62
VPS28-212ENST00000530836 C19orf57Q0VDD7 668 aa18.95■□□□□ 0.62
VPS28-212ENST00000530836 CNPY1Q3B7I2 92 aa18.95■□□□□ 0.62
VPS28-212ENST00000530836 ARMCX4Q5H9R4 360 aa18.95■□□□□ 0.62
VPS28-212ENST00000530836 PDSS1Q5T2R2 415 aa18.95■□□□□ 0.62
VPS28-212ENST00000530836 RPUSD3Q6P087 351 aaKnown RBP18.95■□□□□ 0.62
VPS28-212ENST00000530836 TMPRSS11AQ6ZMR5 421 aa18.95■□□□□ 0.62
VPS28-212ENST00000530836 KLHL36Q8N4N3 616 aa18.95■□□□□ 0.62
VPS28-212ENST00000530836 OR52N1Q8NH53 320 aa18.95■□□□□ 0.62
VPS28-212ENST00000530836 ASB10Q8WXI3 467 aa18.95■□□□□ 0.62
VPS28-212ENST00000530836 SMPDL3BQ92485 455 aa18.95■□□□□ 0.62
VPS28-212ENST00000530836 OR5M11Q96RB7 305 aa18.95■□□□□ 0.62
VPS28-212ENST00000530836 LUZP4Q9P127 313 aa18.95■□□□□ 0.62
VPS28-212ENST00000530836 CAB39Q9Y376 341 aaPredicted RBP18.95■□□□□ 0.62
VPS28-212ENST00000530836 C1QL1O75973 258 aa18.94■□□□□ 0.62
VPS28-212ENST00000530836 APOL3O95236 402 aa18.94■□□□□ 0.62
VPS28-212ENST00000530836 OR2T7P0C7T2 308 aa18.94■□□□□ 0.62
VPS28-212ENST00000530836 LIMS3P0CW19 117 aa18.94■□□□□ 0.62
VPS28-212ENST00000530836 LIMS4P0CW20 117 aa18.94■□□□□ 0.62
VPS28-212ENST00000530836 IFNGR1P15260 489 aa18.94■□□□□ 0.62
VPS28-212ENST00000530836 POU3F2P20265 443 aaPredicted RBP18.94■□□□□ 0.62
VPS28-212ENST00000530836 CRABP1P29762 137 aa18.94■□□□□ 0.62
VPS28-212ENST00000530836 AGFG1P52594 562 aaKnown RBP18.94■□□□□ 0.62
VPS28-212ENST00000530836 EEF1A1P5Q5VTE0 462 aa18.94■□□□□ 0.62
VPS28-212ENST00000530836 SHFQ7M4L6 423 aa18.94■□□□□ 0.62
VPS28-212ENST00000530836 ZNF843Q8N446 348 aa18.94■□□□□ 0.62
VPS28-212ENST00000530836 OR2T27Q8NH04 317 aa18.94■□□□□ 0.62
VPS28-212ENST00000530836 ZPLD1Q8TCW7 415 aa18.94■□□□□ 0.62
VPS28-212ENST00000530836 RELTQ969Z4 430 aa18.94■□□□□ 0.62
VPS28-212ENST00000530836 MRPL48Q96GC5 212 aaKnown RBP18.94■□□□□ 0.62
VPS28-212ENST00000530836 ALG12Q9BV10 488 aa18.94■□□□□ 0.62
VPS28-212ENST00000530836 ACKR4Q9NPB9 350 aa18.94■□□□□ 0.62
VPS28-212ENST00000530836 TIGARQ9NQ88 270 aa18.94■□□□□ 0.62
VPS28-212ENST00000530836 B3GAT1Q9P2W7 334 aa18.94■□□□□ 0.62
VPS28-212ENST00000530836 CFAP46Q8IYW2 2715 aa18.94■□□□□ 0.62
VPS28-212ENST00000530836 DAPL1A0PJW8 107 aa18.93■□□□□ 0.62
VPS28-212ENST00000530836 C12orf71A8MTZ7 269 aa18.93■□□□□ 0.62
VPS28-212ENST00000530836 SCG5P05408 212 aa18.93■□□□□ 0.62
VPS28-212ENST00000530836 HSMCR30P0CW71 290 aa18.93■□□□□ 0.62
VPS28-212ENST00000530836 HLA-DOBP13765 273 aa18.93■□□□□ 0.62
VPS28-212ENST00000530836 MLLT11Q13015 90 aaPredicted RBP18.93■□□□□ 0.62
VPS28-212ENST00000530836 GALEQ14376 348 aa18.93■□□□□ 0.62
VPS28-212ENST00000530836 POU4F3Q15319 338 aa18.93■□□□□ 0.62
VPS28-212ENST00000530836 DNM1P34Q6PK57 102 aa18.93■□□□□ 0.62
VPS28-212ENST00000530836 ZBTB46Q86UZ6 589 aa18.93■□□□□ 0.62
VPS28-212ENST00000530836 P2RY8Q86VZ1 359 aa18.93■□□□□ 0.62
VPS28-212ENST00000530836 KDM8Q8N371 416 aa18.93■□□□□ 0.62
VPS28-212ENST00000530836 TMEM251Q8N6I4 163 aa18.93■□□□□ 0.62
VPS28-212ENST00000530836 OR6K6Q8NGW6 343 aa18.93■□□□□ 0.62
VPS28-212ENST00000530836 SYT4Q9H2B2 425 aa18.93■□□□□ 0.62
VPS28-212ENST00000530836 ENPP5Q9UJA9 477 aa18.93■□□□□ 0.62
VPS28-212ENST00000530836 A0A0J9YW62 118 aa18.92■□□□□ 0.62
VPS28-212ENST00000530836 CD36P16671 472 aa18.92■□□□□ 0.62
VPS28-212ENST00000530836 ZNF43P17038 809 aa18.92■□□□□ 0.62
VPS28-212ENST00000530836 RGS6P49758 472 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms