RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 DUSP3P51452 185 aaPredicted RBP1.32□□□□□ -2.2
NUP98-218ENST00000530516 CCR8P51685 355 aa1.32□□□□□ -2.2
NUP98-218ENST00000530516 CBX1P83916 185 aa1.32□□□□□ -2.2
NUP98-218ENST00000530516 LOXL1Q08397 574 aaPredicted RBP1.32□□□□□ -2.2
NUP98-218ENST00000530516 PON3Q15166 354 aa1.32□□□□□ -2.2
NUP98-218ENST00000530516 IGFBP7Q16270 282 aa1.32□□□□□ -2.2
NUP98-218ENST00000530516 DPYSL2Q16555 572 aa1.32□□□□□ -2.2
NUP98-218ENST00000530516 SFT2D3Q587I9 215 aa1.32□□□□□ -2.2
NUP98-218ENST00000530516 BRD3OSQ6XYD6 125 aa1.32□□□□□ -2.2
NUP98-218ENST00000530516 STRADAQ7RTN6 431 aa1.32□□□□□ -2.2
NUP98-218ENST00000530516 PLA2G4DQ86XP0 818 aa1.32□□□□□ -2.2
NUP98-218ENST00000530516 ECHDC2Q86YB7 292 aa1.32□□□□□ -2.2
NUP98-218ENST00000530516 MFSD9Q8NBP5 474 aa1.32□□□□□ -2.2
NUP98-218ENST00000530516 OR2T34Q8NGX1 318 aa1.32□□□□□ -2.2
NUP98-218ENST00000530516 FAM110BQ8TC76 370 aa1.32□□□□□ -2.2
NUP98-218ENST00000530516 MAIP1Q8WWC4 291 aa1.32□□□□□ -2.2
NUP98-218ENST00000530516 MS4A4EQ96PG1 132 aa1.32□□□□□ -2.2
NUP98-218ENST00000530516 SLC38A2Q96QD8 506 aa1.32□□□□□ -2.2
NUP98-218ENST00000530516 CLCC1Q96S66 551 aa1.32□□□□□ -2.2
NUP98-218ENST00000530516 EXD2Q9NVH0 621 aa1.32□□□□□ -2.2
NUP98-218ENST00000530516 RNF14Q9UBS8 474 aa1.32□□□□□ -2.2
NUP98-218ENST00000530516 PSG8Q9UQ74 426 aa1.32□□□□□ -2.2
NUP98-218ENST00000530516 SHANK1Q9Y566 2161 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 IGLV3-12A0A075B6K2 115 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 CCDC182A6NF36 153 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 ZNF726A6NNF4 738 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 ARPC3O15145 178 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 KMOO15229 486 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 MED7O43513 233 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 KRT8P05787 483 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 POLR2MP0CAP2 368 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 KRT13P13646 458 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 CCDC130P13994 396 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 TCN2P20062 427 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 CCR1P32246 355 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 RDXP35241 583 aaKnown RBP1.31□□□□□ -2.2
NUP98-218ENST00000530516 CD86P42081 329 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 RFX3P48380 749 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 CYB561P49447 251 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 SUB1P53999 127 aaKnown RBP eCLIP1.31□□□□□ -2.2
NUP98-218ENST00000530516 CDK16Q00536 496 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 SCRN3Q0VDG4 424 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 POU2AF1Q16633 256 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 PDK4Q16654 411 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 DGUOKQ16854 277 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 RAET1LQ5VY80 246 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 ZNF493Q6ZR52 646 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 UTS2BQ765I0 119 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 LGI3Q8N145 548 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 TRMT10AQ8TBZ6 339 aaKnown RBP1.31□□□□□ -2.2
NUP98-218ENST00000530516 PYROXD1Q8WU10 500 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 SDR42E1Q8WUS8 393 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 RNF5Q99942 180 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 WFDC1Q9HC57 220 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 ADAP2Q9NPF8 381 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 ZNF229Q9UJW7 825 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 TMEM14AQ9Y6G1 99 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 S4R3C0 116 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 MSH6P52701 1360 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 PNPLA6Q8IY17 1366 aa1.31□□□□□ -2.2
NUP98-218ENST00000530516 RPAP1Q9BWH6 1393 aaPredicted RBP1.31□□□□□ -2.2
NUP98-218ENST00000530516 IGHV3-74A0A0B4J1X5 117 aa1.3□□□□□ -2.2
NUP98-218ENST00000530516 TMEM223A0PJW6 202 aa1.3□□□□□ -2.2
NUP98-218ENST00000530516 K7EPI3 171 aa1.3□□□□□ -2.2
NUP98-218ENST00000530516 SGK1O00141 431 aa1.3□□□□□ -2.2
NUP98-218ENST00000530516 POLR2DO15514 142 aaKnown RBP1.3□□□□□ -2.2
NUP98-218ENST00000530516 TBX19O60806 448 aa1.3□□□□□ -2.2
NUP98-218ENST00000530516 RP2O75695 350 aa1.3□□□□□ -2.2
NUP98-218ENST00000530516 UBTFL1P0CB47 393 aaPredicted RBP1.3□□□□□ -2.2
NUP98-218ENST00000530516 TCN1P20061 433 aaPredicted RBP1.3□□□□□ -2.2
NUP98-218ENST00000530516 COL8A2P25067 703 aa1.3□□□□□ -2.2
NUP98-218ENST00000530516 BPIFB3P59826 476 aa1.3□□□□□ -2.2
NUP98-218ENST00000530516 MEF2BQ02080 365 aaPredicted RBP1.3□□□□□ -2.2
NUP98-218ENST00000530516 ZNF816Q0VGE8 651 aaPredicted RBP1.3□□□□□ -2.2
NUP98-218ENST00000530516 CDC20Q12834 499 aa1.3□□□□□ -2.2
NUP98-218ENST00000530516 ERCC8Q13216 396 aa1.3□□□□□ -2.2
NUP98-218ENST00000530516 NADK2Q4G0N4 442 aa1.3□□□□□ -2.2
NUP98-218ENST00000530516 FILIP1LQ4L180 1135 aa1.3□□□□□ -2.2
NUP98-218ENST00000530516 TMEM225Q6GV28 225 aa1.3□□□□□ -2.2
NUP98-218ENST00000530516 OR4F3Q6IEY1 312 aa1.3□□□□□ -2.2
NUP98-218ENST00000530516 TRIM40Q6P9F5 258 aa1.3□□□□□ -2.2
NUP98-218ENST00000530516 CEMP1Q6PRD7 247 aaPredicted RBP1.3□□□□□ -2.2
NUP98-218ENST00000530516 CALHM3Q86XJ0 350 aa1.3□□□□□ -2.2
NUP98-218ENST00000530516 PUSL1Q8N0Z8 303 aaKnown RBP1.3□□□□□ -2.2
NUP98-218ENST00000530516 MREGQ8N565 214 aa1.3□□□□□ -2.2
NUP98-218ENST00000530516 ZNF557Q8N988 423 aaPredicted RBP1.3□□□□□ -2.2
NUP98-218ENST00000530516 MAGEE2Q8TD90 523 aaPredicted RBP1.3□□□□□ -2.2
NUP98-218ENST00000530516 RNF139Q8WU17 664 aa1.3□□□□□ -2.2
NUP98-218ENST00000530516 CXorf40BQ96DE9 158 aa1.3□□□□□ -2.2
NUP98-218ENST00000530516 DTNBP1Q96EV8 351 aa1.3□□□□□ -2.2
NUP98-218ENST00000530516 SENP8Q96LD8 212 aa1.3□□□□□ -2.2
NUP98-218ENST00000530516 TPPP3Q9BW30 176 aa1.3□□□□□ -2.2
NUP98-218ENST00000530516 MRPL37Q9BZE1 423 aaKnown RBP1.3□□□□□ -2.2
NUP98-218ENST00000530516 RAB33BQ9H082 229 aa1.3□□□□□ -2.2
NUP98-218ENST00000530516 PALMDQ9NP74 551 aa1.3□□□□□ -2.2
NUP98-218ENST00000530516 FARSBQ9NSD9 589 aaKnown RBP1.3□□□□□ -2.2
NUP98-218ENST00000530516 PTPRTO14522 1441 aa1.3□□□□□ -2.2
NUP98-218ENST00000530516 ATP10AO60312 1499 aa1.3□□□□□ -2.2
NUP98-218ENST00000530516 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.29□□□□□ -2.2
NUP98-218ENST00000530516 DOCK8Q8NF50 2099 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms