RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 SLC3A1Q07837 685 aa7.66□□□□□ -1.18
VPS11-203ENST00000529545 RBBP4Q09028 425 aa7.66□□□□□ -1.18
VPS11-203ENST00000529545 RAB39AQ14964 217 aa7.66□□□□□ -1.18
VPS11-203ENST00000529545 PDCD4Q53EL6 469 aaKnown RBP7.66□□□□□ -1.18
VPS11-203ENST00000529545 PHYHD1Q5SRE7 291 aa7.66□□□□□ -1.18
VPS11-203ENST00000529545 RNF220Q5VTB9 566 aa7.66□□□□□ -1.18
VPS11-203ENST00000529545 USP51Q70EK9 711 aa7.66□□□□□ -1.18
VPS11-203ENST00000529545 ZNF627Q7L945 461 aa7.66□□□□□ -1.18
VPS11-203ENST00000529545 SERPINA11Q86U17 422 aa7.66□□□□□ -1.18
VPS11-203ENST00000529545 WDFY1Q8IWB7 410 aa7.66□□□□□ -1.18
VPS11-203ENST00000529545 SYT14Q8NB59 555 aa7.66□□□□□ -1.18
VPS11-203ENST00000529545 PNPT1Q8TCS8 783 aaKnown RBP7.66□□□□□ -1.18
VPS11-203ENST00000529545 EPS8L3Q8TE67 593 aaKnown RBP7.66□□□□□ -1.18
VPS11-203ENST00000529545 DVL3Q92997 716 aaPredicted RBP7.66□□□□□ -1.18
VPS11-203ENST00000529545 POP5Q969H6 163 aaKnown RBP7.66□□□□□ -1.18
VPS11-203ENST00000529545 KTI12Q96EK9 354 aaPredicted RBP7.66□□□□□ -1.18
VPS11-203ENST00000529545 ELMOD3Q96FG2 381 aa7.66□□□□□ -1.18
VPS11-203ENST00000529545 C16orf45Q96MC5 204 aaPredicted RBP7.66□□□□□ -1.18
VPS11-203ENST00000529545 ZNF75AQ96N20 296 aa7.66□□□□□ -1.18
VPS11-203ENST00000529545 FOXB1Q99853 325 aa7.66□□□□□ -1.18
VPS11-203ENST00000529545 PTDSS2Q9BVG9 487 aa7.66□□□□□ -1.18
VPS11-203ENST00000529545 SPATA9Q9BWV2 254 aa7.66□□□□□ -1.18
VPS11-203ENST00000529545 SAP30LQ9HAJ7 183 aa7.66□□□□□ -1.18
VPS11-203ENST00000529545 CDH20Q9HBT6 801 aa7.66□□□□□ -1.18
VPS11-203ENST00000529545 MKS1Q9NXB0 559 aa7.66□□□□□ -1.18
VPS11-203ENST00000529545 UBAP1Q9NZ09 502 aa7.66□□□□□ -1.18
VPS11-203ENST00000529545 SEC14L4Q9UDX3 406 aa7.66□□□□□ -1.18
VPS11-203ENST00000529545 OPN4Q9UHM6 478 aa7.66□□□□□ -1.18
VPS11-203ENST00000529545 NUP50Q9UKX7 468 aa7.66□□□□□ -1.18
VPS11-203ENST00000529545 IFT52Q9Y366 437 aa7.66□□□□□ -1.18
VPS11-203ENST00000529545 TRAV36DV7A0A075B6V5 113 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 PPIAL4EA0A075B759 164 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 PPIAL4CA0A0B4J2A2 164 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 TLDC2A0PJX2 215 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 PPIAL4DF5H284 164 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 TRAF3IP2O43734 574 aaPredicted RBP7.65□□□□□ -1.18
VPS11-203ENST00000529545 CLPTM1O96005 669 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 FSHBP01225 129 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 PTHP01270 115 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 RNASE1P07998 156 aaKnown RBP7.65□□□□□ -1.18
VPS11-203ENST00000529545 MYZAPP0CAP1 466 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 PPIAL4FP0DN26 164 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 LBPP18428 481 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 EGR4Q05215 589 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 OCLNQ16625 522 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 TSTQ16762 297 aaKnown RBP7.65□□□□□ -1.18
VPS11-203ENST00000529545 FAM209AQ5JX71 171 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 COX20Q5RI15 118 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 ZNF771Q7L3S4 317 aaPredicted RBP7.65□□□□□ -1.18
VPS11-203ENST00000529545 PIWIL3Q7Z3Z3 882 aaKnown RBP7.65□□□□□ -1.18
VPS11-203ENST00000529545 MIER2Q8N344 545 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 CLIP4Q8N3C7 705 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 GLB1L3Q8NCI6 653 aaPredicted RBP7.65□□□□□ -1.18
VPS11-203ENST00000529545 ICA1LQ8NDH6 482 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 ADPRHL1Q8NDY3 354 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 CPEB3Q8NE35 698 aaKnown RBP7.65□□□□□ -1.18
VPS11-203ENST00000529545 SLC30A7Q8NEW0 376 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 OR1J2Q8NGS2 313 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 ZNF519Q8TB69 540 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 TAAR8Q969N4 342 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 LRRC58Q96CX6 371 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 OR52E6Q96RD3 313 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 ZBTB18Q99592 522 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 EPYCQ99645 322 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 EMC6Q9BV81 110 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 C1QTNF5Q9BXJ0 243 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 ASPNQ9BXN1 380 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 LRMDAQ9H2I8 198 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 C1orf198Q9H425 327 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 RNF121Q9H920 327 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 C12orf10Q9HB07 376 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 PLEK2Q9NYT0 353 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 SELENONQ9NZV5 590 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 SLC17A7Q9P2U7 560 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 AUP1Q9Y679 476 aa7.65□□□□□ -1.18
VPS11-203ENST00000529545 IGLV3-9A0A075B6K5 115 aa7.64□□□□□ -1.19
VPS11-203ENST00000529545 A0A0G2JPF8 293 aa7.64□□□□□ -1.19
VPS11-203ENST00000529545 HNRNPCL2B2RXH8 293 aa7.64□□□□□ -1.19
VPS11-203ENST00000529545 HNRNPCL3B7ZW38 293 aa7.64□□□□□ -1.19
VPS11-203ENST00000529545 HNRNPCL1O60812 293 aaKnown RBP7.64□□□□□ -1.19
VPS11-203ENST00000529545 SPAG7O75391 227 aa7.64□□□□□ -1.19
VPS11-203ENST00000529545 FARS2O95363 451 aaKnown RBP7.64□□□□□ -1.19
VPS11-203ENST00000529545 C1QCP02747 245 aa7.64□□□□□ -1.19
VPS11-203ENST00000529545 BCHEP06276 602 aa7.64□□□□□ -1.19
VPS11-203ENST00000529545 BPGMP07738 259 aa7.64□□□□□ -1.19
VPS11-203ENST00000529545 HNRNPCL4P0DMR1 293 aa7.64□□□□□ -1.19
VPS11-203ENST00000529545 OR8G3PP0DMU2 310 aa7.64□□□□□ -1.19
VPS11-203ENST00000529545 ZNF250P15622 560 aa7.64□□□□□ -1.19
VPS11-203ENST00000529545 CBLP22681 906 aa7.64□□□□□ -1.19
VPS11-203ENST00000529545 AHCYP23526 432 aa7.64□□□□□ -1.19
VPS11-203ENST00000529545 GCH1P30793 250 aa7.64□□□□□ -1.19
VPS11-203ENST00000529545 CRATP43155 626 aa7.64□□□□□ -1.19
VPS11-203ENST00000529545 MTNR1AP48039 350 aa7.64□□□□□ -1.19
VPS11-203ENST00000529545 CSNK1A1P48729 337 aa7.64□□□□□ -1.19
VPS11-203ENST00000529545 DSTNP60981 165 aa7.64□□□□□ -1.19
VPS11-203ENST00000529545 PLP2Q04941 152 aa7.64□□□□□ -1.19
VPS11-203ENST00000529545 PMS2P3Q13401 168 aa7.64□□□□□ -1.19
VPS11-203ENST00000529545 TBC1D28Q2M2D7 210 aa7.64□□□□□ -1.19
VPS11-203ENST00000529545 TMEM53Q6P2H8 277 aa7.64□□□□□ -1.19
VPS11-203ENST00000529545 C17orf107Q6ZR85 190 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms