RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 OAZ3Q9UMX2 235 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 IER3IP1Q9Y5U9 82 aa12.35□□□□□ -0.43
USF1-209ENST00000529476 OR6C65A6NJZ3 312 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 M0R3G1 203 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 PDLIM1O00151 329 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 TRMUO75648 421 aaKnown RBP12.34□□□□□ -0.43
USF1-209ENST00000529476 BAG2O95816 211 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 PGA4P0DJD7 388 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 PGA3P0DJD8 388 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 ACADSP16219 412 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 SLC6A6P31641 620 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 CCKARP32238 428 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 UGT2B10P36537 528 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 ACVR1BP36896 505 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 DAPP51397 102 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 COX10Q12887 443 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 CLEC12AQ5QGZ9 265 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 C9orf135Q5VTT2 229 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 FAHD1Q6P587 224 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 STAC2Q6ZMT1 411 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 DPY19L2P2Q6ZN68 376 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 FAM122BQ7Z309 247 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 PQLC1Q8N2U9 271 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 GPR137CQ8N3F9 429 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 OR6N1Q8NGY5 312 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 ZNF519Q8TB69 540 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 HDAC2Q92769 488 aaKnown RBP12.34□□□□□ -0.43
USF1-209ENST00000529476 TMEM54Q969K7 222 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 ZNF566Q969W8 418 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 RASD2Q96D21 266 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 LRR1Q96L50 414 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 Q96M85 177 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 IFT27Q9BW83 186 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 GABARAPL1Q9H0R8 117 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 SMURF2Q9HAU4 748 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 IL20Q9NYY1 176 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 GRHPRQ9UBQ7 328 aa12.34□□□□□ -0.43
USF1-209ENST00000529476 TEX13CA0A0J9YWL9 993 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 ZNF587BE7ETH6 402 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 C16orf97H3BN30 126 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 LYZL6O75951 148 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 IGHG1P01857 330 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 ITGA5P08648 1049 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 COX5AP20674 150 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 CSNK1A1P48729 337 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 RPS6KA3P51812 740 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 CLRN1P58418 232 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 MYBPC1Q00872 1141 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 ROR2Q01974 943 aaKnown RBP12.33□□□□□ -0.44
USF1-209ENST00000529476 ITGADQ13349 1161 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 P2RY6Q15077 328 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 RCN1Q15293 331 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 SLC36A3Q495N2 470 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 MESTQ5EB52 335 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 SFRP5Q5T4F7 317 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 RPL13AP3Q6NVV1 102 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 HDDC2Q7Z4H3 204 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 ZNF433Q8N7K0 673 aaPredicted RBP12.33□□□□□ -0.44
USF1-209ENST00000529476 CLDN22Q8N7P3 220 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 ARIH2OSQ8N7S6 290 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 SYT14Q8NB59 555 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 NOXO1Q8NFA2 376 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 OR52L1Q8NGH7 329 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 MAGEE2Q8TD90 523 aaPredicted RBP12.33□□□□□ -0.44
USF1-209ENST00000529476 ZNF837Q96EG3 531 aaPredicted RBP12.33□□□□□ -0.44
USF1-209ENST00000529476 ZNF570Q96NI8 536 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 ERMAPQ96PL5 475 aaPredicted RBP12.33□□□□□ -0.44
USF1-209ENST00000529476 CIB1Q99828 191 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 MRPL13Q9BYD1 178 aaKnown RBP12.33□□□□□ -0.44
USF1-209ENST00000529476 GPR35Q9HC97 309 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 TBC1D23Q9NUY8 699 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 GLTPQ9NZD2 209 aa12.33□□□□□ -0.44
USF1-209ENST00000529476 SETD2Q9BYW2 2564 aaPredicted RBP12.33□□□□□ -0.44
USF1-209ENST00000529476 A6NIZ1 184 aa12.32□□□□□ -0.44
USF1-209ENST00000529476 H3BN98 237 aa12.32□□□□□ -0.44
USF1-209ENST00000529476 H7C1C5 153 aa12.32□□□□□ -0.44
USF1-209ENST00000529476 BHLHE40O14503 412 aa12.32□□□□□ -0.44
USF1-209ENST00000529476 SOCS2O14508 198 aa12.32□□□□□ -0.44
USF1-209ENST00000529476 ARHGEF9O43307 516 aa12.32□□□□□ -0.44
USF1-209ENST00000529476 MITFO75030 526 aaPredicted RBP12.32□□□□□ -0.44
USF1-209ENST00000529476 OSMP13725 252 aa12.32□□□□□ -0.44
USF1-209ENST00000529476 ANPEPP15144 967 aa12.32□□□□□ -0.44
USF1-209ENST00000529476 IGFBP2P18065 325 aa12.32□□□□□ -0.44
USF1-209ENST00000529476 CDH2P19022 906 aaPredicted RBP12.32□□□□□ -0.44
USF1-209ENST00000529476 PSMB1P20618 241 aaKnown RBP12.32□□□□□ -0.44
USF1-209ENST00000529476 MPGP29372 298 aa12.32□□□□□ -0.44
USF1-209ENST00000529476 SDHAP31040 664 aa12.32□□□□□ -0.44
USF1-209ENST00000529476 PCYT1AP49585 367 aa12.32□□□□□ -0.44
USF1-209ENST00000529476 RAP1BP61224 184 aa12.32□□□□□ -0.44
USF1-209ENST00000529476 LCN6P62502 163 aa12.32□□□□□ -0.44
USF1-209ENST00000529476 RAP1AP62834 184 aa12.32□□□□□ -0.44
USF1-209ENST00000529476 KRR1Q13601 381 aaKnown RBP12.32□□□□□ -0.44
USF1-209ENST00000529476 FAM205BPQ63HN1 556 aa12.32□□□□□ -0.44
USF1-209ENST00000529476 GPR139Q6DWJ6 353 aa12.32□□□□□ -0.44
USF1-209ENST00000529476 LRFN4Q6PJG9 635 aa12.32□□□□□ -0.44
USF1-209ENST00000529476 BHLHA15Q7RTS1 189 aaPredicted RBP12.32□□□□□ -0.44
USF1-209ENST00000529476 ABHD12BQ7Z5M8 362 aaPredicted RBP12.32□□□□□ -0.44
USF1-209ENST00000529476 OR4Q3Q8NH05 313 aa12.32□□□□□ -0.44
USF1-209ENST00000529476 KISS1RQ969F8 398 aaPredicted RBP12.32□□□□□ -0.44
USF1-209ENST00000529476 KCNK17Q96T54 332 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms